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The map label for this gene is ygxB [H]

Identifier: 154685399

GI number: 154685399

Start: 942656

End: 944218

Strand: Reverse

Name: ygxB [H]

Synonym: RBAM_009650

Alternate gene names: 154685399

Gene position: 944218-942656 (Counterclockwise)

Preceding gene: 154685401

Following gene: 154685398

Centisome position: 24.1

GC content: 49.46

Gene sequence:

>1563_bases
GTGGGTAAAACACACACCATACCCCAAAAAGAAAAGGAGCGATTCTACTTGAATAAAGCAGACATGCTTACGACGTATCT
CAGCAAACTCCCGAATCTGATCATCGCACTGCTCGTCCTGCTTATCGGCTGGGGCATTGCCAAAATCATTGAAAAAGCCG
TATACAAAGGCCTGCAAAAAACAAAAATCGACGATAGGCTGTTCGCCGAAAAAAAGCCGGCGCGCTATTCCTCAGAAAAA
GTCATCAGTAAAGTCATTTATTTTATCGCATTAATCATCGTTTTTATTCTATTCTTTAACATTCTGCATCTGACAACCGT
GGCTTCGCCTTTTGTCAGCATGCTGTCAGCGATAACGGCGGCTGTGCCGAGCATTTTAAAAGCCGGCCTGATTCTGCTGT
TGGGCTGGGCGGCCGCTTCGCTTTTCAGCTATCTCGTCAAAAAAGCGGGCATGAAACTCGCTGAAAACGGCCGGCTCAGA
AAATGGACAATGGTGTCTGAAGAAGCGGAGATGAGCAGATCCGTTACGGCCGCTTCACGAATCGTTTTTTACTTCGTCTT
GCTCTTGTTCCTGCCCGGCGTCTTGGCCGCTCTCCAAATCAGCGGAGTATCAGGGCCGTTTACAAATATGATCCAAAGCG
TTTTGTCCTTTATACCGAAATTATTCGCCGCGGCGCTGATTGTTTTAATCGGCTGGCTTGTTGCCCGTCTCGTTCGTGAT
ATCGTCACAAACTTTCTGGCGAGTATCGGCACGGAAAGGCTCGCCGCACGTATGGGGCTTTCTATATACCTGAAGGATAC
AAGCCTGTCGGCAATCATCGGAACGATTGTCTACGTGCTGATTTTCATTCCGGTGATCATTTCTGCGCTTGACCGGCTTG
ATGTGGCGGGTATTTCTGAACCGGCGTCAGCCATGCTGCACACGGTCTTCACAATGCTCCCTAATATCATCATCGGTATC
GTGCTGATCATCGCCGGCATCTGGATCGGAAAATGGGTCAACAGCATTGTATCCGGGCTCTTGCACCGGGCCGGTTTCGA
CTCTCTTCTCGGTAAAATGGGTTTTGAACAGACGGGTACCCCGAAGCTGACGCTTTCTCAGACGGTCGGCATGATTGTTC
AGATCATCATCGTCCTGCTCTTTACGGCAGAGGCGCTGCAGCTTGTTCATCTCGAATTTCTCGTCGTTATCGCAACCGGT
ATTATCGCTTACCTGCCTAATGTTCTGGCCGCTGTATTTATTCTCGGAATCGGACTTTTGGCCGGACAGCTCGTCAGCAG
GCTGCTTGCCGGCATGCTGAGCGGAAAGGAATTCAGATTCCTGGCGCCGCTTGCGAAATATACCATTATCACTCTTTCAA
TCTTTATGGCGCTGGATCAGCTCGGTGTCGCCGACACGATCGTAAATGCCGCGTTTATTCTGATTCTGGGCGGTTTCGCG
CTTGCCTTCGGACTTTCATTCGGTCTTGGCGGAAAAGAATTTGCCTCCCGTTATCTCGCAAAATTGGATCGCAAAATTGA
AAAACATCAATCGGCTGACGATCGGAAGCCGCCGATGTCTTAA

Upstream 100 bases:

>100_bases
TTATTTATAATGTATGACCCCTCCTCTCAAAAGATGAAATAACAGACCGGTTTCCGTCTGAAAACTTTCGGCACATCCGC
CCCGTTTGCTTTATCTGTAA

Downstream 100 bases:

>100_bases
CGAAAAAAACGTGCGCTCAGAAGGAGCGCACGTTTTTTTTTGAGTTAAGGGGGCAAATTCCTTTTTTTTCATTTTAGATT
CATATATGATAGACTGTAAC

Product: YgxB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MGKTHTIPQKEKERFYLNKADMLTTYLSKLPNLIIALLVLLIGWGIAKIIEKAVYKGLQKTKIDDRLFAEKKPARYSSEK
VISKVIYFIALIIVFILFFNILHLTTVASPFVSMLSAITAAVPSILKAGLILLLGWAAASLFSYLVKKAGMKLAENGRLR
KWTMVSEEAEMSRSVTAASRIVFYFVLLLFLPGVLAALQISGVSGPFTNMIQSVLSFIPKLFAAALIVLIGWLVARLVRD
IVTNFLASIGTERLAARMGLSIYLKDTSLSAIIGTIVYVLIFIPVIISALDRLDVAGISEPASAMLHTVFTMLPNIIIGI
VLIIAGIWIGKWVNSIVSGLLHRAGFDSLLGKMGFEQTGTPKLTLSQTVGMIVQIIIVLLFTAEALQLVHLEFLVVIATG
IIAYLPNVLAAVFILGIGLLAGQLVSRLLAGMLSGKEFRFLAPLAKYTIITLSIFMALDQLGVADTIVNAAFILILGGFA
LAFGLSFGLGGKEFASRYLAKLDRKIEKHQSADDRKPPMS

Sequences:

>Translated_520_residues
MGKTHTIPQKEKERFYLNKADMLTTYLSKLPNLIIALLVLLIGWGIAKIIEKAVYKGLQKTKIDDRLFAEKKPARYSSEK
VISKVIYFIALIIVFILFFNILHLTTVASPFVSMLSAITAAVPSILKAGLILLLGWAAASLFSYLVKKAGMKLAENGRLR
KWTMVSEEAEMSRSVTAASRIVFYFVLLLFLPGVLAALQISGVSGPFTNMIQSVLSFIPKLFAAALIVLIGWLVARLVRD
IVTNFLASIGTERLAARMGLSIYLKDTSLSAIIGTIVYVLIFIPVIISALDRLDVAGISEPASAMLHTVFTMLPNIIIGI
VLIIAGIWIGKWVNSIVSGLLHRAGFDSLLGKMGFEQTGTPKLTLSQTVGMIVQIIIVLLFTAEALQLVHLEFLVVIATG
IIAYLPNVLAAVFILGIGLLAGQLVSRLLAGMLSGKEFRFLAPLAKYTIITLSIFMALDQLGVADTIVNAAFILILGGFA
LAFGLSFGLGGKEFASRYLAKLDRKIEKHQSADDRKPPMS
>Mature_519_residues
GKTHTIPQKEKERFYLNKADMLTTYLSKLPNLIIALLVLLIGWGIAKIIEKAVYKGLQKTKIDDRLFAEKKPARYSSEKV
ISKVIYFIALIIVFILFFNILHLTTVASPFVSMLSAITAAVPSILKAGLILLLGWAAASLFSYLVKKAGMKLAENGRLRK
WTMVSEEAEMSRSVTAASRIVFYFVLLLFLPGVLAALQISGVSGPFTNMIQSVLSFIPKLFAAALIVLIGWLVARLVRDI
VTNFLASIGTERLAARMGLSIYLKDTSLSAIIGTIVYVLIFIPVIISALDRLDVAGISEPASAMLHTVFTMLPNIIIGIV
LIIAGIWIGKWVNSIVSGLLHRAGFDSLLGKMGFEQTGTPKLTLSQTVGMIVQIIIVLLFTAEALQLVHLEFLVVIATGI
IAYLPNVLAAVFILGIGLLAGQLVSRLLAGMLSGKEFRFLAPLAKYTIITLSIFMALDQLGVADTIVNAAFILILGGFAL
AFGLSFGLGGKEFASRYLAKLDRKIEKHQSADDRKPPMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 56543; Mature: 56412

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTHTIPQKEKERFYLNKADMLTTYLSKLPNLIIALLVLLIGWGIAKIIEKAVYKGLQK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKIDDRLFAEKKPARYSSEKVISKVIYFIALIIVFILFFNILHLTTVASPFVSMLSAITA
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVPSILKAGLILLLGWAAASLFSYLVKKAGMKLAENGRLRKWTMVSEEAEMSRSVTAASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
IVFYFVLLLFLPGVLAALQISGVSGPFTNMIQSVLSFIPKLFAAALIVLIGWLVARLVRD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTNFLASIGTERLAARMGLSIYLKDTSLSAIIGTIVYVLIFIPVIISALDRLDVAGISE
HHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PASAMLHTVFTMLPNIIIGIVLIIAGIWIGKWVNSIVSGLLHRAGFDSLLGKMGFEQTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
PKLTLSQTVGMIVQIIIVLLFTAEALQLVHLEFLVVIATGIIAYLPNVLAAVFILGIGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQLVSRLLAGMLSGKEFRFLAPLAKYTIITLSIFMALDQLGVADTIVNAAFILILGGFA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFGLSFGLGGKEFASRYLAKLDRKIEKHQSADDRKPPMS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GKTHTIPQKEKERFYLNKADMLTTYLSKLPNLIIALLVLLIGWGIAKIIEKAVYKGLQK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKIDDRLFAEKKPARYSSEKVISKVIYFIALIIVFILFFNILHLTTVASPFVSMLSAITA
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVPSILKAGLILLLGWAAASLFSYLVKKAGMKLAENGRLRKWTMVSEEAEMSRSVTAASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
IVFYFVLLLFLPGVLAALQISGVSGPFTNMIQSVLSFIPKLFAAALIVLIGWLVARLVRD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVTNFLASIGTERLAARMGLSIYLKDTSLSAIIGTIVYVLIFIPVIISALDRLDVAGISE
HHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PASAMLHTVFTMLPNIIIGIVLIIAGIWIGKWVNSIVSGLLHRAGFDSLLGKMGFEQTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
PKLTLSQTVGMIVQIIIVLLFTAEALQLVHLEFLVVIATGIIAYLPNVLAAVFILGIGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQLVSRLLAGMLSGKEFRFLAPLAKYTIITLSIFMALDQLGVADTIVNAAFILILGGFA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFGLSFGLGGKEFASRYLAKLDRKIEKHQSADDRKPPMS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]