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The map label for this gene is cotP [H]

Identifier: 154685248

GI number: 154685248

Start: 783924

End: 784355

Strand: Reverse

Name: cotP [H]

Synonym: RBAM_007940

Alternate gene names: 154685248

Gene position: 784355-783924 (Counterclockwise)

Preceding gene: 154685249

Following gene: 154685246

Centisome position: 20.02

GC content: 46.3

Gene sequence:

>432_bases
GTGGATATCGAAAAAATGAGAAAGTGGCTTGAGATTACGAACGAGCACAAGCCCAGCGACTTTTGGACCAATGTCCTGAA
ACGGAAATCTCCCGAAGATTTTTTCTCCTTACAAAAAAACACCCTGACTTATGATATTTATCAGGATGAACAGCACACAT
TCGTCATTGTGGAAATGCCCGGCGTTTACGAAGAAGAATTGACATTGAGGCTGCTGTCAAGAACACGGCTGCATATCAGA
GGAAACATCACACCCCTTTTTCCAAAGAACATGGGCGTCTGCCAAAACCGGTATTACGGGGAAATCGATGAGACGATTGA
GCTTCCTGAACCGGCTGAGCCCCACCTGTTACAGGCGCAGTGCGTAAACGGCCTGCTCCACATTTCCTACCCGCGCCTTA
TGGAGCACATTCCTTTTCAGAAAAAAATCTAA

Upstream 100 bases:

>100_bases
TTTGAATTCGGGCCATCTTGACCCTGACGTGAGCGATCAGGATCAGATCGCCAACCCGTCAATGCCGATCGCAAATCAAA
TATAGGGAGGTTCTGCCGAA

Downstream 100 bases:

>100_bases
AGAGCCGGCTTACGGGCGGCCCAGCCGTCTGTACACTTTCTCCTTATAATGAGAAGATGCGGGTTTTGAGAACATGGCTT
TCTCCTCCGTCAGTTTGTCG

Product: CotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDEQHTFVIVEMPGVYEEELTLRLLSRTRLHIR
GNITPLFPKNMGVCQNRYYGEIDETIELPEPAEPHLLQAQCVNGLLHISYPRLMEHIPFQKKI

Sequences:

>Translated_143_residues
MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDEQHTFVIVEMPGVYEEELTLRLLSRTRLHIR
GNITPLFPKNMGVCQNRYYGEIDETIELPEPAEPHLLQAQCVNGLLHISYPRLMEHIPFQKKI
>Mature_143_residues
MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDEQHTFVIVEMPGVYEEELTLRLLSRTRLHIR
GNITPLFPKNMGVCQNRYYGEIDETIELPEPAEPHLLQAQCVNGLLHISYPRLMEHIPFQKKI

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17058; Mature: 17058

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDEQHTFVIVEMP
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCEEEEEECC
GVYEEELTLRLLSRTRLHIRGNITPLFPKNMGVCQNRYYGEIDETIELPEPAEPHLLQAQ
CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEHHH
CVNGLLHISYPRLMEHIPFQKKI
HHCCEEECCHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIEKMRKWLEITNEHKPSDFWTNVLKRKSPEDFFSLQKNTLTYDIYQDEQHTFVIVEMP
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCEEEEEECC
GVYEEELTLRLLSRTRLHIRGNITPLFPKNMGVCQNRYYGEIDETIELPEPAEPHLLQAQ
CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEHHH
CVNGLLHISYPRLMEHIPFQKKI
HHCCEEECCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11150673 [H]