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The map label for this gene is yvdS [H]

Identifier: 154685083

GI number: 154685083

Start: 597191

End: 597520

Strand: Reverse

Name: yvdS [H]

Synonym: RBAM_006210

Alternate gene names: 154685083

Gene position: 597520-597191 (Counterclockwise)

Preceding gene: 154685084

Following gene: 154685082

Centisome position: 15.25

GC content: 43.94

Gene sequence:

>330_bases
ATGTATTGGCTGCTTGTATTGATAGCCGGACTGTTAGAAGTAGTTTGGGCGTCCGCCCTGAAGCATGCGGATTCGCTCTT
TGATTGGATTGGTATTTTCCTTCTGATTGCCGTCAGCTTTCTGATGCTGATCCGCTCTTATAAAAAAATTCCGATGGCTG
CCGCATATACCGTTTTTGTCGGAATAGGCACCGTCGGCACATATGTAACGGGCGTCATTTTAGGCGAATCGTTTTCAATC
GGGCAAATATTCTTTTTGGCTTTGCTGTTGTCCGGCATTTTAGGAATGAAGGTATTTACGAAAGAAACTGAAACAAGGGG
TGAACATTAA

Upstream 100 bases:

>100_bases
CTTTCTCAAAAGAAGCTTGCAGAAATGATTGGCAGAGACCGATCATTTTTGACCGCCGTAAAAATGACTGACATTCATTC
ATAACTGAGGTGACTGTATC

Downstream 100 bases:

>100_bases
TGGCATGGCTGCTGTTATTTATTGCCGGAGCGGAGGAAGTTGTAGCGGCCGTTGCCATGAAACATATTGACGGTTTTAAA
AAAAAGTGGCCGCTGATTGT

Product: YvdS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKIPMAAAYTVFVGIGTVGTYVTGVILGESFSI
GQIFFLALLLSGILGMKVFTKETETRGEH

Sequences:

>Translated_109_residues
MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKIPMAAAYTVFVGIGTVGTYVTGVILGESFSI
GQIFFLALLLSGILGMKVFTKETETRGEH
>Mature_109_residues
MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKIPMAAAYTVFVGIGTVGTYVTGVILGESFSI
GQIFFLALLLSGILGMKVFTKETETRGEH

Specific function: Suppresses A Groel Mutation And Mimics The Effect Of Groe Overexpression. Could Act As A Chaperone. [C]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family [H]

Homologues:

Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=41.3461538461538, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000390 [H]

Pfam domain/function: PF00893 Multi_Drug_Res [H]

EC number: NA

Molecular weight: Translated: 12005; Mature: 12005

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKIPMAAAYTVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIGTVGTYVTGVILGESFSIGQIFFLALLLSGILGMKVFTKETETRGEH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYWLLVLIAGLLEVVWASALKHADSLFDWIGIFLLIAVSFLMLIRSYKKIPMAAAYTVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIGTVGTYVTGVILGESFSIGQIFFLALLLSGILGMKVFTKETETRGEH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]