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The map label for this gene is yvdE [H]

Identifier: 154685057

GI number: 154685057

Start: 571719

End: 572441

Strand: Reverse

Name: yvdE [H]

Synonym: RBAM_005950

Alternate gene names: 154685057

Gene position: 572441-571719 (Counterclockwise)

Preceding gene: 154685058

Following gene: 154685053

Centisome position: 14.61

GC content: 46.47

Gene sequence:

>723_bases
ATGGCCAAACACATCGGAATTACGGGAAACATTATGGCTGATCAATCCGGCCCTTTCCCGGGTTATAATCGGGCATATGT
CAATAATGATTATATTCAGTCTGTTTCTGAGGCCGGCGGTGTGCCGTTTATATTGCCGGTGATTCAAGAGACGGCGCTTT
TAAAGGAACAGGTCTCTCATGTTGACGGGATCATTCTGTCCGGCGGTCAGGATATAGACCCGCTGTTTTACGGTGAAGAA
CCTTTACAGGCTTTAAGAAAGACCTTTCCTGATCGGGACGCCTACGAGAAGGAGCTGATTCTCACGGCGGTTGCTTTAGA
AAAGCCGATTCTGGCCATCTGCCGGGGGATGCATATGTTAAACGTCACTTACGGGGGAACTTTATATCAAGACCTGACAC
ACGCTTCGTTTGCTGACATTAAGCATGATCAAGAAAAAGATCCGCCGTTAAAAACCCATCATGTTTCTTTTGAAAAAGGG
ACACGTCTTCATTCCTTGTTTGGCGATTCAGCGCGGGTGAATTCATTCCATCACCAGATCATAAAAGAGACGGCGCCTTC
GTTTAAAGCCTCGGCTTATGCGAAAGACGGGGCCATTGAAGCGATTGAACGGACGGGTGAATTATTTGTCGTCGGCGTGC
AATGGCATCCCGAAATGCTGACAAAAAAACATGAAGACATGAAAAAGCTTTTTTCTCATTTCATGGATGCGGTCAGCACA
TAA

Upstream 100 bases:

>100_bases
TTTTACTTTGGAAAGCTCACGTATCATGAAGAATAATTTCAAACTGATTTGTACAACCTACGTTCAGATTAATTATGAGC
ATGGTTCAGGGGGGCGAAGA

Downstream 100 bases:

>100_bases
AAAAAGCAGATCATAACGATCTGCTTTTTCATTTTATTCTTCCGGTTTCTCCGGTGTTTTGCCTTGTGTCAGCTTATGGC
CTTCGATATCCACGTTCGGA

Product: putative glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAKHIGITGNIMADQSGPFPGYNRAYVNNDYIQSVSEAGGVPFILPVIQETALLKEQVSHVDGIILSGGQDIDPLFYGEE
PLQALRKTFPDRDAYEKELILTAVALEKPILAICRGMHMLNVTYGGTLYQDLTHASFADIKHDQEKDPPLKTHHVSFEKG
TRLHSLFGDSARVNSFHHQIIKETAPSFKASAYAKDGAIEAIERTGELFVVGVQWHPEMLTKKHEDMKKLFSHFMDAVST

Sequences:

>Translated_240_residues
MAKHIGITGNIMADQSGPFPGYNRAYVNNDYIQSVSEAGGVPFILPVIQETALLKEQVSHVDGIILSGGQDIDPLFYGEE
PLQALRKTFPDRDAYEKELILTAVALEKPILAICRGMHMLNVTYGGTLYQDLTHASFADIKHDQEKDPPLKTHHVSFEKG
TRLHSLFGDSARVNSFHHQIIKETAPSFKASAYAKDGAIEAIERTGELFVVGVQWHPEMLTKKHEDMKKLFSHFMDAVST
>Mature_239_residues
AKHIGITGNIMADQSGPFPGYNRAYVNNDYIQSVSEAGGVPFILPVIQETALLKEQVSHVDGIILSGGQDIDPLFYGEEP
LQALRKTFPDRDAYEKELILTAVALEKPILAICRGMHMLNVTYGGTLYQDLTHASFADIKHDQEKDPPLKTHHVSFEKGT
RLHSLFGDSARVNSFHHQIIKETAPSFKASAYAKDGAIEAIERTGELFVVGVQWHPEMLTKKHEDMKKLFSHFMDAVST

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=230, Percent_Identity=31.304347826087, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26705; Mature: 26574

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHIGITGNIMADQSGPFPGYNRAYVNNDYIQSVSEAGGVPFILPVIQETALLKEQVSH
CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
VDGIILSGGQDIDPLFYGEEPLQALRKTFPDRDAYEKELILTAVALEKPILAICRGMHML
HCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCEE
NVTYGGTLYQDLTHASFADIKHDQEKDPPLKTHHVSFEKGTRLHSLFGDSARVNSFHHQI
EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHCCHHHHHHCCCHHHHHHHHHH
IKETAPSFKASAYAKDGAIEAIERTGELFVVGVQWHPEMLTKKHEDMKKLFSHFMDAVST
HHHHCCCHHHHHHHCCCHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKHIGITGNIMADQSGPFPGYNRAYVNNDYIQSVSEAGGVPFILPVIQETALLKEQVSH
CCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
VDGIILSGGQDIDPLFYGEEPLQALRKTFPDRDAYEKELILTAVALEKPILAICRGMHML
HCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCEE
NVTYGGTLYQDLTHASFADIKHDQEKDPPLKTHHVSFEKGTRLHSLFGDSARVNSFHHQI
EEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHCCHHHHHHCCCHHHHHHHHHH
IKETAPSFKASAYAKDGAIEAIERTGELFVVGVQWHPEMLTKKHEDMKKLFSHFMDAVST
HHHHCCCHHHHHHHCCCHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]