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The map label for this gene is ykkA [H]

Identifier: 154685025

GI number: 154685025

Start: 541785

End: 542267

Strand: Reverse

Name: ykkA [H]

Synonym: RBAM_005630

Alternate gene names: 154685025

Gene position: 542267-541785 (Counterclockwise)

Preceding gene: 154685036

Following gene: 154685021

Centisome position: 13.84

GC content: 37.06

Gene sequence:

>483_bases
GTGATGCTGTATTCTGCCGTTAATGAAAATTACAGCCGCTTAATATCCATTGTGTCAGACATGTCACAGCAGGAGATCGC
TTATAAAGGACCAAATCAAACATACAATAGTACAGCTCAGCTAATAAGACACTTAGCAAATGTTGATCTCAACTGGATAT
TCAGAATAAAGGGTGAACCGATACCAAAGCAGCTTGAAGAGAAGTATGGACCAATGTTAGATCAGAACAATAAGCTCCCT
TTCATTTCCGGTGTTTCATTAGAACAAATTCTCACTGATTATGAAGAAGTATTCAGCATGTTTAAGTCTGTTTGTTATCA
GTTAACTGACGATCAGCTGAATCATACAGTAGATTATGAAGCAGAAAAACAAGCAACCATTCAATGGGGAATATGGCATA
TGGCAGATCATAATAGATATCATCAAGCTCATATTCATCAGCTTCGCAAATGGTTTGAAGAGAAACAGAAACTTGGCAGT
TAA

Upstream 100 bases:

>100_bases
GAGCCTGCTTCATTGCTTCATCCTCTAGCGATTCATTCCCTGAATGGCTTGACAAATATGAGTAATAAGGCAAACTGAAT
ATAAAAATTGTGCTAATGAG

Downstream 100 bases:

>100_bases
AGCCGCTTATTAGGAGGAGCAAGGATGAATTTATTACAAATTCCCTGCGGATCGTCTATTTTCACTGACTGCCAATCAAT
TAAAATGGTCAGACAAAAAA

Product: YkkA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMLYSAVNENYSRLISIVSDMSQQEIAYKGPNQTYNSTAQLIRHLANVDLNWIFRIKGEPIPKQLEEKYGPMLDQNNKLP
FISGVSLEQILTDYEEVFSMFKSVCYQLTDDQLNHTVDYEAEKQATIQWGIWHMADHNRYHQAHIHQLRKWFEEKQKLGS

Sequences:

>Translated_160_residues
MMLYSAVNENYSRLISIVSDMSQQEIAYKGPNQTYNSTAQLIRHLANVDLNWIFRIKGEPIPKQLEEKYGPMLDQNNKLP
FISGVSLEQILTDYEEVFSMFKSVCYQLTDDQLNHTVDYEAEKQATIQWGIWHMADHNRYHQAHIHQLRKWFEEKQKLGS
>Mature_160_residues
MMLYSAVNENYSRLISIVSDMSQQEIAYKGPNQTYNSTAQLIRHLANVDLNWIFRIKGEPIPKQLEEKYGPMLDQNNKLP
FISGVSLEQILTDYEEVFSMFKSVCYQLTDDQLNHTVDYEAEKQATIQWGIWHMADHNRYHQAHIHQLRKWFEEKQKLGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007061 [H]

Pfam domain/function: PF04978 DUF664 [H]

EC number: NA

Molecular weight: Translated: 18883; Mature: 18883

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLYSAVNENYSRLISIVSDMSQQEIAYKGPNQTYNSTAQLIRHLANVDLNWIFRIKGEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
IPKQLEEKYGPMLDQNNKLPFISGVSLEQILTDYEEVFSMFKSVCYQLTDDQLNHTVDYE
CCHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
AEKQATIQWGIWHMADHNRYHQAHIHQLRKWFEEKQKLGS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMLYSAVNENYSRLISIVSDMSQQEIAYKGPNQTYNSTAQLIRHLANVDLNWIFRIKGEP
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
IPKQLEEKYGPMLDQNNKLPFISGVSLEQILTDYEEVFSMFKSVCYQLTDDQLNHTVDYE
CCHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
AEKQATIQWGIWHMADHNRYHQAHIHQLRKWFEEKQKLGS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]