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The map label for this gene is yvdO [H]

Identifier: 154685016

GI number: 154685016

Start: 532534

End: 533499

Strand: Reverse

Name: yvdO [H]

Synonym: RBAM_005540

Alternate gene names: 154685016

Gene position: 533499-532534 (Counterclockwise)

Preceding gene: 154685021

Following gene: 154685013

Centisome position: 13.61

GC content: 47.41

Gene sequence:

>966_bases
TTGGCAAAATATCGGATCATGACCTTTGACGGGGGCGGTACCTTAGGTGCTTTAAGTTTACAGCTATTGAACAGACTGGC
TGAACAAAATCCAGCATTAATAAGCCGAACCCATGTATTTGCGGGAAATTCAATCGGTTCATTTACTGCCCTTGCATTAG
CAAGCGGAAGATCTCCGAAGGAAACACTTCAGTATTTTGAGGATGAAATCCTGCCCGCATTCAGCACTTCCCGGCCGGGC
GGACCTGTTTTCAATCAACAATTACCATATTCCGGTTTTATTAAAGCGGTACGAAACTTTTTCCCGCCAGGCCTTCGTCT
TAAAGATGTAAGAAAACGAATTGTTGTCCCTTCATTCAAATTATACTCCCCAGCACTGGATCGTTGGACGCCCGTATTAT
TTCACAACTTTCCCGGCTCTCCCTATTTAAATGAGAAAGTGAGCGATGTCATACTGCGGAGCAGCGGTGCTCCCGCGACG
CAGCGAGCCTATCAAAACTACGTGGACGGATATGTAGTGGCAACGAACCCCAGTACGGCCAGTATCGCGTTTGCGGTTGG
TAAAGCCAACGTGCCACTGGATCAAATTGCGGCGCTATCCATCGGTACAGGTGAAGCCCCGACTCGGTTAAGAAGAGATA
CGAGGGGGTGGGGAATGGTAAGTGCGGATAACATACGTCCCGAAAATCTGAAGAACCTTCCTCCAAATTGGGGAGTCCTT
TTGGACAGGTCGCCTAATGAACCATTACTGCCATTTCTTCAGATGATCTCCGGCGGAAATGGCTACTATGAATCTATGGT
CAGCGCGAATCTGCTGGGAGATCGCTTTTTCCGGTTAGATCCGCGGATTCCTAACTTCTCCAAAACAGACCCTTCCGTGG
TTCCCGCTGTCATTGAAATTGCGAACAAAACCAGCTTACAGCCTGTGAATACATTTATAGAGAAAAACTGGAACAACAAC
CATTAA

Upstream 100 bases:

>100_bases
AAACCATTTTTAAGATAAAGAGATATTCATTCATCCATACAATAGACTCTGGTTGAACATATACTAAATGATAGTTTTCA
TCAGAAAGGAGAAATCAGCT

Downstream 100 bases:

>100_bases
GTAAGTTAGAAGTTTATAATAATTCAATGAACAAAAAATACCAAGGGACTCAAAACCCTTGGTATTATTAATGCGGCCGA
GAGGGTTTGGACCTTCACGG

Product: YvdO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MAKYRIMTFDGGGTLGALSLQLLNRLAEQNPALISRTHVFAGNSIGSFTALALASGRSPKETLQYFEDEILPAFSTSRPG
GPVFNQQLPYSGFIKAVRNFFPPGLRLKDVRKRIVVPSFKLYSPALDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPAT
QRAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAALSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
LDRSPNEPLLPFLQMISGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPSVVPAVIEIANKTSLQPVNTFIEKNWNNN
H

Sequences:

>Translated_321_residues
MAKYRIMTFDGGGTLGALSLQLLNRLAEQNPALISRTHVFAGNSIGSFTALALASGRSPKETLQYFEDEILPAFSTSRPG
GPVFNQQLPYSGFIKAVRNFFPPGLRLKDVRKRIVVPSFKLYSPALDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPAT
QRAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAALSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
LDRSPNEPLLPFLQMISGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPSVVPAVIEIANKTSLQPVNTFIEKNWNNN
H
>Mature_320_residues
AKYRIMTFDGGGTLGALSLQLLNRLAEQNPALISRTHVFAGNSIGSFTALALASGRSPKETLQYFEDEILPAFSTSRPGG
PVFNQQLPYSGFIKAVRNFFPPGLRLKDVRKRIVVPSFKLYSPALDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQ
RAYQNYVDGYVVATNPSTASIAFAVGKANVPLDQIAALSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVLL
DRSPNEPLLPFLQMISGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPSVVPAVIEIANKTSLQPVNTFIEKNWNNNH

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Spore wall, spore coat (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35311; Mature: 35179

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYRIMTFDGGGTLGALSLQLLNRLAEQNPALISRTHVFAGNSIGSFTALALASGRSPK
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCCHH
ETLQYFEDEILPAFSTSRPGGPVFNQQLPYSGFIKAVRNFFPPGLRLKDVRKRIVVPSFK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH
LYSPALDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQRAYQNYVDGYVVATNPSTA
HHCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
SIAFAVGKANVPLDQIAALSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
EEEEEECCCCCCHHHHHEEECCCCCCCHHHHHCCCCCCEEECCCCCCCHHCCCCCCCCEE
LDRSPNEPLLPFLQMISGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPSVVPAVIEI
EECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHH
ANKTSLQPVNTFIEKNWNNNH
HCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKYRIMTFDGGGTLGALSLQLLNRLAEQNPALISRTHVFAGNSIGSFTALALASGRSPK
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCCHH
ETLQYFEDEILPAFSTSRPGGPVFNQQLPYSGFIKAVRNFFPPGLRLKDVRKRIVVPSFK
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHH
LYSPALDRWTPVLFHNFPGSPYLNEKVSDVILRSSGAPATQRAYQNYVDGYVVATNPSTA
HHCCHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCC
SIAFAVGKANVPLDQIAALSIGTGEAPTRLRRDTRGWGMVSADNIRPENLKNLPPNWGVL
EEEEEECCCCCCHHHHHEEECCCCCCCHHHHHCCCCCCEEECCCCCCCHHCCCCCCCCEE
LDRSPNEPLLPFLQMISGGNGYYESMVSANLLGDRFFRLDPRIPNFSKTDPSVVPAVIEI
EECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHH
ANKTSLQPVNTFIEKNWNNNH
HCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]