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The map label for this gene is ywnA1 [H]

Identifier: 154684993

GI number: 154684993

Start: 512050

End: 512493

Strand: Reverse

Name: ywnA1 [H]

Synonym: RBAM_005310

Alternate gene names: 154684993

Gene position: 512493-512050 (Counterclockwise)

Preceding gene: 154684998

Following gene: 154684992

Centisome position: 13.08

GC content: 35.59

Gene sequence:

>444_bases
ATGTCTATTAGCAGCCGTTTTGCTGTAGGAATTCATATATTGGCTCTTATTGAAATAAATGAAGACGGAATTAGCACTTC
TGAATTTTTAGCTGGAAGTGTAAATACAAATCCCGCCTTCATAAGAAAAATTGTGGGGATGCTGAAAAAAGCAGGTTTAG
TAAAAGTTCGGCCAGGTATTGCAGGAGCTGAATTAGCGAAGGATCTAACTGAAATCACCTTACTTGATGTTTATAGAGCA
GTTAATGTTGTTCAAGATAAAGAATTGTTTAGTATACATGAAAATCCCAATCCTCAATGTCCTGTAGGCCGGAACATTCA
AAGTACAATTGGTCCAATATTTGAAATCGCCCAATCTGCCTTGGAAAAAGCTCTTGGGCATATCACAATTGAGGATGTGG
TAAAGGATATTATTGAAAAAGAAAAATTGACCAATAATTGTTAA

Upstream 100 bases:

>100_bases
CATCTTGTTAATTGAGCATATTAGAGTAAAAGAACTTGTAATACATTCAGTTACAAGTGTACTATAAAGAGTGTAAAGTA
ATGAGGATGGTGAAGAAATC

Downstream 100 bases:

>100_bases
ATGATTTCACAGAAAATCTTTTATCAGACTGGGGATAAAAAAATGGCTTTTCATGAACAAAAAAAGAGCAGACATAAAGT
CTGCTCCTTTTGATGAAAGA

Product: YwnA1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSISSRFAVGIHILALIEINEDGISTSEFLAGSVNTNPAFIRKIVGMLKKAGLVKVRPGIAGAELAKDLTEITLLDVYRA
VNVVQDKELFSIHENPNPQCPVGRNIQSTIGPIFEIAQSALEKALGHITIEDVVKDIIEKEKLTNNC

Sequences:

>Translated_147_residues
MSISSRFAVGIHILALIEINEDGISTSEFLAGSVNTNPAFIRKIVGMLKKAGLVKVRPGIAGAELAKDLTEITLLDVYRA
VNVVQDKELFSIHENPNPQCPVGRNIQSTIGPIFEIAQSALEKALGHITIEDVVKDIIEKEKLTNNC
>Mature_146_residues
SISSRFAVGIHILALIEINEDGISTSEFLAGSVNTNPAFIRKIVGMLKKAGLVKVRPGIAGAELAKDLTEITLLDVYRAV
NVVQDKELFSIHENPNPQCPVGRNIQSTIGPIFEIAQSALEKALGHITIEDVVKDIIEKEKLTNNC

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15948; Mature: 15817

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISSRFAVGIHILALIEINEDGISTSEFLAGSVNTNPAFIRKIVGMLKKAGLVKVRPGI
CCCCCHHHHHEEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCC
AGAELAKDLTEITLLDVYRAVNVVQDKELFSIHENPNPQCPVGRNIQSTIGPIFEIAQSA
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEKALGHITIEDVVKDIIEKEKLTNNC
HHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SISSRFAVGIHILALIEINEDGISTSEFLAGSVNTNPAFIRKIVGMLKKAGLVKVRPGI
CCCCHHHHHEEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCC
AGAELAKDLTEITLLDVYRAVNVVQDKELFSIHENPNPQCPVGRNIQSTIGPIFEIAQSA
CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEKALGHITIEDVVKDIIEKEKLTNNC
HHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]