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The map label for this gene is ybaN [H]

Identifier: 154684676

GI number: 154684676

Start: 160608

End: 161372

Strand: Reverse

Name: ybaN [H]

Synonym: RBAM_001830

Alternate gene names: 154684676

Gene position: 161372-160608 (Counterclockwise)

Preceding gene: 154684677

Following gene: 154684674

Centisome position: 4.12

GC content: 45.1

Gene sequence:

>765_bases
GTGAATCACTTCTACGTATGGCACATCAGAAGGATAAAACAGCTGCTTATTATTATCATTGCCGCATTTGCAGCAGCCAG
CTTTTTTTATATACAGAGAGCCGTCCCCCTTCCTGTATTTTTAACTGATAGCGGCCCGAAGGCTATTTCAAAAGGGGAGA
CGAAAGCGGGCGAAGTCGCATTAACATTCGATATCAGCTGGGGCGATGAAAAGGCGGTTCCGATTCTGAACGCGCTAAAA
GCAAACGGTATTAAAAACGCCACTTTTTTTCTGTCAGCTTCTTGGGCGGAACGGCACCCGGACACGGTTGAACGTATGGT
AAAAGACGGACATCAAATAGGCAGCATGGGATATGCGTATAAGAATTATACCAACCTAGAGGACAATGAAATAAAAAAAG
ATATCCTCCGGGCCCAGACCGCATTTAAAAAGCTGGGTGTGAAGAATGTTCATTTACTCCGCCCGCCGACCGGACAATTT
AATAAAAAGGTTCTTACCATTGCACAGCAGTACCACTATTCAGTGGTTCATTACAGCGTTAACTCGCAGGATTGGACAAA
TCCCGGCCCTGATAAAATCATTGAAAATGTAAACAGTCATATAAAAGGCGGCGACATTGTCCTGCTGCACGCCTCTGATT
CAGCAACACAGACTGAAGAAGCGCTCCCCGCCATCATCCACAATTTAAAGCAAAAAGGACTGAAAAACGTGACCGTCGGC
GACCTGATCGCAAATACTGACGTCAAGTCATCAGAAGTGAAATAA

Upstream 100 bases:

>100_bases
AAGTGTTTTTTTCATTTTTTTTAAAACGTATTTCGTTATATTCATCTCCGCCGCGGCATACGATGTAATCAAGCATGGAC
AAGATAAGGAGGCGTCATCA

Downstream 100 bases:

>100_bases
TTACCTCTGGGCAAACTTCGGCAGCATTAACAGCTGAAACGCATTGCAGCCCATCAGCGGAATCAGCATCAAATAAAGCC
AGTCCTCATTATTCACTCGT

Product: YbaN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNHFYVWHIRRIKQLLIIIIAAFAAASFFYIQRAVPLPVFLTDSGPKAISKGETKAGEVALTFDISWGDEKAVPILNALK
ANGIKNATFFLSASWAERHPDTVERMVKDGHQIGSMGYAYKNYTNLEDNEIKKDILRAQTAFKKLGVKNVHLLRPPTGQF
NKKVLTIAQQYHYSVVHYSVNSQDWTNPGPDKIIENVNSHIKGGDIVLLHASDSATQTEEALPAIIHNLKQKGLKNVTVG
DLIANTDVKSSEVK

Sequences:

>Translated_254_residues
MNHFYVWHIRRIKQLLIIIIAAFAAASFFYIQRAVPLPVFLTDSGPKAISKGETKAGEVALTFDISWGDEKAVPILNALK
ANGIKNATFFLSASWAERHPDTVERMVKDGHQIGSMGYAYKNYTNLEDNEIKKDILRAQTAFKKLGVKNVHLLRPPTGQF
NKKVLTIAQQYHYSVVHYSVNSQDWTNPGPDKIIENVNSHIKGGDIVLLHASDSATQTEEALPAIIHNLKQKGLKNVTVG
DLIANTDVKSSEVK
>Mature_254_residues
MNHFYVWHIRRIKQLLIIIIAAFAAASFFYIQRAVPLPVFLTDSGPKAISKGETKAGEVALTFDISWGDEKAVPILNALK
ANGIKNATFFLSASWAERHPDTVERMVKDGHQIGSMGYAYKNYTNLEDNEIKKDILRAQTAFKKLGVKNVHLLRPPTGQF
NKKVLTIAQQYHYSVVHYSVNSQDWTNPGPDKIIENVNSHIKGGDIVLLHASDSATQTEEALPAIIHNLKQKGLKNVTVG
DLIANTDVKSSEVK

Specific function: Necessary to maintain spores after the late stage of sporulation. Might be involved in cortex formation [H]

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Forespore. Note=Produced in the mother cell compartment and transported into the forespore [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014132 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28261; Mature: 28261

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHFYVWHIRRIKQLLIIIIAAFAAASFFYIQRAVPLPVFLTDSGPKAISKGETKAGEVA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCEE
LTFDISWGDEKAVPILNALKANGIKNATFFLSASWAERHPDTVERMVKDGHQIGSMGYAY
EEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHHHHHCCHHHCCCCCEE
KNYTNLEDNEIKKDILRAQTAFKKLGVKNVHLLRPPTGQFNKKVLTIAQQYHYSVVHYSV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCEEEEEEEE
NSQDWTNPGPDKIIENVNSHIKGGDIVLLHASDSATQTEEALPAIIHNLKQKGLKNVTVG
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHH
DLIANTDVKSSEVK
HHHCCCCCCCCCCC
>Mature Secondary Structure
MNHFYVWHIRRIKQLLIIIIAAFAAASFFYIQRAVPLPVFLTDSGPKAISKGETKAGEVA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCEE
LTFDISWGDEKAVPILNALKANGIKNATFFLSASWAERHPDTVERMVKDGHQIGSMGYAY
EEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHHHHHCCHHHCCCCCEE
KNYTNLEDNEIKKDILRAQTAFKKLGVKNVHLLRPPTGQFNKKVLTIAQQYHYSVVHYSV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCEEEEEEEE
NSQDWTNPGPDKIIENVNSHIKGGDIVLLHASDSATQTEEALPAIIHNLKQKGLKNVTVG
CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHH
DLIANTDVKSSEVK
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377; 8576055 [H]