Click here to switch to the map view.

The map label for this gene is yiaO [C]

Identifier: 154248638

GI number: 154248638

Start: 5233909

End: 5235003

Strand: Direct

Name: yiaO [C]

Synonym: Xaut_4720

Alternate gene names: 154248638

Gene position: 5233909-5235003 (Clockwise)

Preceding gene: 154248636

Following gene: 154248639

Centisome position: 98.59

GC content: 66.21

Gene sequence:

>1095_bases
ATGGACATCAAGCGCCGGCACTTCATTGGCGCCTCCGCCACAGCGCTCGCCACCGGCGCGCTCGCAGCTCCGGCCCTTGC
CCAGAGCCAGCCCGAGGTGAAGTGGCGCCTGACCTCCTCCTTCCCCCGGTCGCTGGACACCATCTACGGCACCGCGCAGA
CCTTCGCACGCTACGTGTCCGAGGCCACCGATGGGCGGTTCCAGATCCAGACCTTCCCGGCGGGAGAGCTGGTGCCCGGC
CTGCAGGCGCTGGATGCGGTCTCCACCGGCTCGGTGGAATGCGCGCAGACCGCCACCTATTTCTACACTGGCAAGGACCC
GGCGCTGGCCTTCGGCACCGGCGTGCCGTTCGGCTTCAACTCGCGCCAGCAGCATTCCTGGTGGTTCTTCGGCGGTGGCG
CTGAGATCATCAACGGCGTGCTCGCCAAGTATAATGTCACCTCCATGCCCATGGGCAATTCGGGGTGCCAGATGGGCGGC
TTCTTCCGCAAGGAGCTTACCGGCGTCGACGACCTGAAGGGCCTGAAGTTCCGCATCGGCGGCATCGGCGGCCAGGTGCT
GGCGAAGCTGGGCGTGGTGCCGCAGCAGATCGTGCCCGGCGATGTCTATGCCGCCCTCGAGCGCGGCACCATCGACGCCG
CCGAGTTCGTCGGCCCCTACGACGACGAGAAGCTCGGCCTCGTGAAGGTGGCGAAATATTACTACTACCCTGGCTGGTGG
GAAGGCGGGGCCATGATGCACCTTGTCATCAACGACAAGCAGTGGAACGCCCTGCCGAAGCACTACCAGGCCATCGTCCG
CAACGCCGCCGAAGCCGCCAACAACTGGATGCTGGCCAAGTACGACTTTGTGAACCCGCCGGCCCTGCGCCGCCTGGTGC
AGCAGGGGGCGGAGCTACGGCCCTTCCCGCCCTCCATCATGGAGGCGGGCCACAAGGCGGCGTTCGAGCTCTATAACGAG
ATCGCCGCCACCAACCCGGCCTTCAAACAGGCGCTGGAGTCCATGACCGCCGTCCGCGCCGACCAGCTGGTGTGGTGGCA
GATCGCCGAATACGCCTACGACAGCTTCAACATCCGCAACCGCGGCAAGAGCTGA

Upstream 100 bases:

>100_bases
GGGTCGCTCCAGCGCCGCGCGGTCCGCACCGCGCGCAGACAAGACACCAATCGGCTGTCGCAATGGCAACGCCGACAAGA
AAAGGCCCGAGGAGCACCAT

Downstream 100 bases:

>100_bases
GATCCGGGGCAGGCGAGCGGCGCGAAGGCGCGGCCGGCACCTGACGGACCGTGATGAAGCCATAGTTTCGTCACCATTCC
CGTTCGGTGTCGGGCTATAG

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MDIKRRHFIGASATALATGALAAPALAQSQPEVKWRLTSSFPRSLDTIYGTAQTFARYVSEATDGRFQIQTFPAGELVPG
LQALDAVSTGSVECAQTATYFYTGKDPALAFGTGVPFGFNSRQQHSWWFFGGGAEIINGVLAKYNVTSMPMGNSGCQMGG
FFRKELTGVDDLKGLKFRIGGIGGQVLAKLGVVPQQIVPGDVYAALERGTIDAAEFVGPYDDEKLGLVKVAKYYYYPGWW
EGGAMMHLVINDKQWNALPKHYQAIVRNAAEAANNWMLAKYDFVNPPALRRLVQQGAELRPFPPSIMEAGHKAAFELYNE
IAATNPAFKQALESMTAVRADQLVWWQIAEYAYDSFNIRNRGKS

Sequences:

>Translated_364_residues
MDIKRRHFIGASATALATGALAAPALAQSQPEVKWRLTSSFPRSLDTIYGTAQTFARYVSEATDGRFQIQTFPAGELVPG
LQALDAVSTGSVECAQTATYFYTGKDPALAFGTGVPFGFNSRQQHSWWFFGGGAEIINGVLAKYNVTSMPMGNSGCQMGG
FFRKELTGVDDLKGLKFRIGGIGGQVLAKLGVVPQQIVPGDVYAALERGTIDAAEFVGPYDDEKLGLVKVAKYYYYPGWW
EGGAMMHLVINDKQWNALPKHYQAIVRNAAEAANNWMLAKYDFVNPPALRRLVQQGAELRPFPPSIMEAGHKAAFELYNE
IAATNPAFKQALESMTAVRADQLVWWQIAEYAYDSFNIRNRGKS
>Mature_364_residues
MDIKRRHFIGASATALATGALAAPALAQSQPEVKWRLTSSFPRSLDTIYGTAQTFARYVSEATDGRFQIQTFPAGELVPG
LQALDAVSTGSVECAQTATYFYTGKDPALAFGTGVPFGFNSRQQHSWWFFGGGAEIINGVLAKYNVTSMPMGNSGCQMGG
FFRKELTGVDDLKGLKFRIGGIGGQVLAKLGVVPQQIVPGDVYAALERGTIDAAEFVGPYDDEKLGLVKVAKYYYYPGWW
EGGAMMHLVINDKQWNALPKHYQAIVRNAAEAANNWMLAKYDFVNPPALRRLVQQGAELRPFPPSIMEAGHKAAFELYNE
IAATNPAFKQALESMTAVRADQLVWWQIAEYAYDSFNIRNRGKS

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39907; Mature: 39907

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRRHFIGASATALATGALAAPALAQSQPEVKWRLTSSFPRSLDTIYGTAQTFARYVS
CCCCCCEECCCCHHHHHHHHHHCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EATDGRFQIQTFPAGELVPGLQALDAVSTGSVECAQTATYFYTGKDPALAFGTGVPFGFN
HCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCC
SRQQHSWWFFGGGAEIINGVLAKYNVTSMPMGNSGCQMGGFFRKELTGVDDLKGLKFRIG
CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEC
GIGGQVLAKLGVVPQQIVPGDVYAALERGTIDAAEFVGPYDDEKLGLVKVAKYYYYPGWW
CCCHHHHHHHCCCCHHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEE
EGGAMMHLVINDKQWNALPKHYQAIVRNAAEAANNWMLAKYDFVNPPALRRLVQQGAELR
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCC
PFPPSIMEAGHKAAFELYNEIAATNPAFKQALESMTAVRADQLVWWQIAEYAYDSFNIRN
CCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGKS
CCCC
>Mature Secondary Structure
MDIKRRHFIGASATALATGALAAPALAQSQPEVKWRLTSSFPRSLDTIYGTAQTFARYVS
CCCCCCEECCCCHHHHHHHHHHCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EATDGRFQIQTFPAGELVPGLQALDAVSTGSVECAQTATYFYTGKDPALAFGTGVPFGFN
HCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCC
SRQQHSWWFFGGGAEIINGVLAKYNVTSMPMGNSGCQMGGFFRKELTGVDDLKGLKFRIG
CCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEC
GIGGQVLAKLGVVPQQIVPGDVYAALERGTIDAAEFVGPYDDEKLGLVKVAKYYYYPGWW
CCCHHHHHHHCCCCHHHCCCHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCEE
EGGAMMHLVINDKQWNALPKHYQAIVRNAAEAANNWMLAKYDFVNPPALRRLVQQGAELR
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCC
PFPPSIMEAGHKAAFELYNEIAATNPAFKQALESMTAVRADQLVWWQIAEYAYDSFNIRN
CCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGKS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA