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The map label for this gene is yjiA [H]

Identifier: 154248628

GI number: 154248628

Start: 5223399

End: 5224466

Strand: Direct

Name: yjiA [H]

Synonym: Xaut_4710

Alternate gene names: 154248628

Gene position: 5223399-5224466 (Clockwise)

Preceding gene: 154248627

Following gene: 154248630

Centisome position: 98.39

GC content: 64.51

Gene sequence:

>1068_bases
ATGGCTGAAACGCAGGCCGAGAAGATCCCCGTCACCGTGCTCACCGGCTATCTGGGCGCCGGCAAGACGACGCTGCTCAA
CCGCATCCTCTCGCAGCCCCACGGCAAGAAATTCGCTGTCATCGTCAATGAGTTCGGCGAGATTGGCATCGACAACGACC
TCGTGGTGGGCGCCGACGAGGAAGTGTTCGAGATGAACAACGGCTGCATCTGCTGCACCGTGCGCGGCGATCTCATCCGC
GTCATCGACGGCCTGCTGCGCCGCAAGGGCGGCTTCGACGGCATCATCGTCGAGACCACCGGCCTTGCCGACCCGGCCCC
CGTGGCCCAGACCTTCTTCGTGGACGAGGAAGTGCAGGCCAAGACCCGCCTCGACGCCGTGGTCACCGTGGCCGACGCCA
AGTGGCTGTCCGACCGGCTGAAGGACGCTCCCGAGGCCAAGAACCAGGTGGCCTTCGCCGACGTGATCCTGCTCAACAAG
ACCGATCTCGTCACCGGCGCGGAGCTTGACCAGGTGGAAGCCCGCATCCGCGGCATCAACCCCTATGCCAAGCTCTACCG
CACCACGAAGTCGGAGATCGACATCGCCAAGGTGCTGAACCAGGGCGCCTTCGACCTCGACCGCATCCTGGAGCTGGAGC
CCGCCTTCCTCGAGGACGACGACCACCACCATCACGACCATGAGCACGGGCCGGACTGCGGCTGCGACCATGATCACGGC
CACGATCACGCGCACGATCATCATCACCACGGCCTGAAGGCGGTGCATGACGACGAGGTGCAGTCGGTCGCCTTCTCCAC
CGAGAAGGAGCTGAACCCGGACAAGTTCTTCCCTTGGGTGCAGAATCTGGTGGCCACCGAAGGGCCGAACATTCTGCGCT
CCAAGGGCATCCTGTCGTTTGCCAACGACCCGGACCGCTTCGTGTTCCAGGGCGTGCACATGATCCTCGACGGCGATCAC
CAGCGCCCGTGGAAGGCCGACGAGAAGCGCGTGAGCCGCATCGTCTTCATCGGCCGCAAGCTTGATCGCAAGGCGCTGGA
GGACGGCTTCCTGTCCTGCGCGGCGTGA

Upstream 100 bases:

>100_bases
AGCTTTCCGCCGCTTTGGCGAGCTGAGCGCCACAGTTCCGGTTTTCAAATCGCGGCGGCCGGAGAGCCCTCCGGCCGCCG
CCCGACATCAGGTGAATGCC

Downstream 100 bases:

>100_bases
TCGCTCGCACGGTTCCAGAACGCAACAAGGCCCGCGGCATCCCCGCGGGCCTTGTTCATTTCAGCGCCCTCAGGCCATCA
GGCCGCGCACCAGCAGGTCG

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MAETQAEKIPVTVLTGYLGAGKTTLLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADEEVFEMNNGCICCTVRGDLIR
VIDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQAKTRLDAVVTVADAKWLSDRLKDAPEAKNQVAFADVILLNK
TDLVTGAELDQVEARIRGINPYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDHDHG
HDHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGILSFANDPDRFVFQGVHMILDGDH
QRPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA

Sequences:

>Translated_355_residues
MAETQAEKIPVTVLTGYLGAGKTTLLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADEEVFEMNNGCICCTVRGDLIR
VIDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQAKTRLDAVVTVADAKWLSDRLKDAPEAKNQVAFADVILLNK
TDLVTGAELDQVEARIRGINPYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDHDHG
HDHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGILSFANDPDRFVFQGVHMILDGDH
QRPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA
>Mature_354_residues
AETQAEKIPVTVLTGYLGAGKTTLLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADEEVFEMNNGCICCTVRGDLIRV
IDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQAKTRLDAVVTVADAKWLSDRLKDAPEAKNQVAFADVILLNKT
DLVTGAELDQVEARIRGINPYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDHDHGH
DHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGILSFANDPDRFVFQGVHMILDGDHQ
RPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=384, Percent_Identity=34.1145833333333, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI126722884, Length=368, Percent_Identity=34.2391304347826, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI148727351, Length=368, Percent_Identity=34.2391304347826, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI146231952, Length=368, Percent_Identity=33.9673913043478, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI223941779, Length=368, Percent_Identity=32.6086956521739, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI223941776, Length=357, Percent_Identity=33.0532212885154, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI119120938, Length=133, Percent_Identity=49.6240601503759, Blast_Score=138, Evalue=6e-33,
Organism=Escherichia coli, GI87082430, Length=347, Percent_Identity=32.2766570605187, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1788499, Length=157, Percent_Identity=34.3949044585987, Blast_Score=85, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6324356, Length=392, Percent_Identity=27.5510204081633, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39420; Mature: 39289

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETQAEKIPVTVLTGYLGAGKTTLLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADE
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCH
EVFEMNNGCICCTVRGDLIRVIDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQA
HHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHEECCHHHHH
KTRLDAVVTVADAKWLSDRLKDAPEAKNQVAFADVILLNKTDLVTGAELDQVEARIRGIN
HHHHHHEEEEHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCC
PYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDHDHG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HDHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGILSF
CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEE
ANDPDRFVFQGVHMILDGDHQRPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA
CCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AETQAEKIPVTVLTGYLGAGKTTLLNRILSQPHGKKFAVIVNEFGEIGIDNDLVVGADE
CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCH
EVFEMNNGCICCTVRGDLIRVIDGLLRRKGGFDGIIVETTGLADPAPVAQTFFVDEEVQA
HHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHEECCHHHHH
KTRLDAVVTVADAKWLSDRLKDAPEAKNQVAFADVILLNKTDLVTGAELDQVEARIRGIN
HHHHHHEEEEHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCC
PYAKLYRTTKSEIDIAKVLNQGAFDLDRILELEPAFLEDDDHHHHDHEHGPDCGCDHDHG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HDHAHDHHHHGLKAVHDDEVQSVAFSTEKELNPDKFFPWVQNLVATEGPNILRSKGILSF
CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCEEE
ANDPDRFVFQGVHMILDGDHQRPWKADEKRVSRIVFIGRKLDRKALEDGFLSCAA
CCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]