| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248555
Identifier: 154248555
GI number: 154248555
Start: 5125882
End: 5127576
Strand: Direct
Name: 154248555
Synonym: Xaut_4636
Alternate gene names: NA
Gene position: 5125882-5127576 (Clockwise)
Preceding gene: 154248534
Following gene: 154248557
Centisome position: 96.55
GC content: 75.69
Gene sequence:
>1695_bases ATGCTACAGCAGTTGTTCGGTTCCCAGCTCGCGCTTCCGATCCGCCTGGCGATCGCCGTCGTCGTGATCGGCGCCTTGTT GGCCGTGACAGTGCTGGTGATGCGACGCCTCACCAGCCGTGGGCGCGGCCCCGTCCGCAGCGGGCGCGCCGGTCCCCGCC TCGCGGTTCTGGACAGTGTCGCGGTGGATCAGCGCCGTCGGCTCATCCTGGTCCGCCGGGACGAGGTTGAGCACCTGCTG CTCGTGGGTGGCAGCAGCGACATCGTGGTGGAGCACCAGATCGCCGTCGAGGATGAGGCCCCCGCTGCCGCGCCCGCGCC TGCCCCGGCCCTCGCCGCCTCCCGCGAAGCCCCGGCCCTGCAGCGACCCGCCGGCCGGCGTGGCCTTCCTCCTGCCGCGC CTGTGGCTCCCGTCGCTCTGGCAGCGGAAAGCGTCAGCGCGCCCCTGCCGGCGCCAGAGCCCGCTCCTGCGGTGGCCGTG GCTCCGCCGGCACCCGCCGTCGCGCCAGCGCCTCTCGCCGAGCCCCGCGAGGACCGTCGTCCCCTGCCCTCCCGCCGGCC CCTGCTGCGCGGCGACAATCCCGCCCCGGCGCCGCGGCCGTCCCTGCGCCCCGCCGTCGAGCCCCCTGCCATCACGCCGC CCGCCGCTCCTGCGTATGCGCCTCGGCCTGCGCCGCACGCGCCCCTGACCGCCGCCGCACCGGCGGTGGAGCCTGAAGCG GTCCGGCCCGCCGCCGTGGAGGCCCGCAAGGCGCCCGAGATCGAGCTCGCGCCGCCCGCGCGACTCGAGCCGGCACCCAT CCTCCGGATGGAGCCCTCGCGCTCCGAAGCGCCCGCCCCGACCACCGACAGGCGCCTTGACGAGCTGACCCAGCGGCTCG ATGCGGCGTTGGCCCATCCCGAGCCGGTCGAGCCCACCTCTACGGTAGCCGAACCCCAGCTGAGCCTTGCCGACCTGCTC GGCGAGGCCCCCGAAAAGGCGGCCGAGCCGGAATCCGCTCCCCAGGACGCCGCGCCCAAGGTGGAACCCCGGGTGGAACA CAAGTCTGAGGCCGCGCCCGAGGCCGTGGTCAATCCGGAACCCGCCATCGACAGCCCGCAGGTGCGCCCCTCCGACCGGC CGCTCTCGCGCTTCCTCTACCAGTCGCGGTCACGTCCCGAGCCGCGCGGCGGCGAGGATGTGCGCCCGCGCCTCGATCCC CTGCCCCGGATCGAGCGCCCGTCGGAAGACGGCGTCCGCCCGGCCGCTCCGGCCCGCTCCGAGCCGCCGCTGCGGCCCCG GGAGTTCGCGTTCCGCCCGGTTGAAGCCAATCCCCGCGAGCCCGCCACCCGGGAGGCGCCCGCCCTCGACGCGCCGCGCC GCGAGCCGCCGGCCCTGCGCGAGATCACCCGGGAGCCGCTGCGCCCCATCGAGGCCACCCCGGTCCTGCCCCGTCCGGGC ATCGGGATCGAGGCCAAGAGCGAGGCAAAGCCCGAGGTGAAAGCCGAGATCAAGGCCGACGCCCAGCTGGAGTCCAAAGT GGACGAGGAGGTCCCGGCCCGTCCCGGCTTCATCCCGTCCGTGGCGCCCAAGGCCGCCGACGCTCTGGCCGACACCCCGG CCCCCGCGCCCGAGCCGAAGGCGAAGGATCCGCTCGACGATTTCGATGCCGAGATGGCCGACCTGCTCGGTCGCAGCAGC GCCCGCGGGCACTGA
Upstream 100 bases:
>100_bases GAAGAGGCAGAGCGCCGCCGTCGTCGGCATGGGGGTTTCCCCAATTGCGTTTCGTGGTCCACAGGCACACGAAACGCCCT TACATCAGAGCGGAGGCATG
Downstream 100 bases:
>100_bases ACCGAACGCCACGCATAAAAAAGGCCGGCGACGCCATGCGTCGCCGGCCTTTTGATTGGCGGCGATGAAACCGAAGACGG CGCCCGTCGGGGCGTCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLQQLFGSQLALPIRLAIAVVVIGALLAVTVLVMRRLTSRGRGPVRSGRAGPRLAVLDSVAVDQRRRLILVRRDEVEHLL LVGGSSDIVVEHQIAVEDEAPAAAPAPAPALAASREAPALQRPAGRRGLPPAAPVAPVALAAESVSAPLPAPEPAPAVAV APPAPAVAPAPLAEPREDRRPLPSRRPLLRGDNPAPAPRPSLRPAVEPPAITPPAAPAYAPRPAPHAPLTAAAPAVEPEA VRPAAVEARKAPEIELAPPARLEPAPILRMEPSRSEAPAPTTDRRLDELTQRLDAALAHPEPVEPTSTVAEPQLSLADLL GEAPEKAAEPESAPQDAAPKVEPRVEHKSEAAPEAVVNPEPAIDSPQVRPSDRPLSRFLYQSRSRPEPRGGEDVRPRLDP LPRIERPSEDGVRPAAPARSEPPLRPREFAFRPVEANPREPATREAPALDAPRREPPALREITREPLRPIEATPVLPRPG IGIEAKSEAKPEVKAEIKADAQLESKVDEEVPARPGFIPSVAPKAADALADTPAPAPEPKAKDPLDDFDAEMADLLGRSS ARGH
Sequences:
>Translated_564_residues MLQQLFGSQLALPIRLAIAVVVIGALLAVTVLVMRRLTSRGRGPVRSGRAGPRLAVLDSVAVDQRRRLILVRRDEVEHLL LVGGSSDIVVEHQIAVEDEAPAAAPAPAPALAASREAPALQRPAGRRGLPPAAPVAPVALAAESVSAPLPAPEPAPAVAV APPAPAVAPAPLAEPREDRRPLPSRRPLLRGDNPAPAPRPSLRPAVEPPAITPPAAPAYAPRPAPHAPLTAAAPAVEPEA VRPAAVEARKAPEIELAPPARLEPAPILRMEPSRSEAPAPTTDRRLDELTQRLDAALAHPEPVEPTSTVAEPQLSLADLL GEAPEKAAEPESAPQDAAPKVEPRVEHKSEAAPEAVVNPEPAIDSPQVRPSDRPLSRFLYQSRSRPEPRGGEDVRPRLDP LPRIERPSEDGVRPAAPARSEPPLRPREFAFRPVEANPREPATREAPALDAPRREPPALREITREPLRPIEATPVLPRPG IGIEAKSEAKPEVKAEIKADAQLESKVDEEVPARPGFIPSVAPKAADALADTPAPAPEPKAKDPLDDFDAEMADLLGRSS ARGH >Mature_564_residues MLQQLFGSQLALPIRLAIAVVVIGALLAVTVLVMRRLTSRGRGPVRSGRAGPRLAVLDSVAVDQRRRLILVRRDEVEHLL LVGGSSDIVVEHQIAVEDEAPAAAPAPAPALAASREAPALQRPAGRRGLPPAAPVAPVALAAESVSAPLPAPEPAPAVAV APPAPAVAPAPLAEPREDRRPLPSRRPLLRGDNPAPAPRPSLRPAVEPPAITPPAAPAYAPRPAPHAPLTAAAPAVEPEA VRPAAVEARKAPEIELAPPARLEPAPILRMEPSRSEAPAPTTDRRLDELTQRLDAALAHPEPVEPTSTVAEPQLSLADLL GEAPEKAAEPESAPQDAAPKVEPRVEHKSEAAPEAVVNPEPAIDSPQVRPSDRPLSRFLYQSRSRPEPRGGEDVRPRLDP LPRIERPSEDGVRPAAPARSEPPLRPREFAFRPVEANPREPATREAPALDAPRREPPALREITREPLRPIEATPVLPRPG IGIEAKSEAKPEVKAEIKADAQLESKVDEEVPARPGFIPSVAPKAADALADTPAPAPEPKAKDPLDDFDAEMADLLGRSS ARGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59628; Mature: 59628
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQLFGSQLALPIRLAIAVVVIGALLAVTVLVMRRLTSRGRGPVRSGRAGPRLAVLDSV CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH AVDQRRRLILVRRDEVEHLLLVGGSSDIVVEHQIAVEDEAPAAAPAPAPALAASREAPAL HHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCHH QRPAGRRGLPPAAPVAPVALAAESVSAPLPAPEPAPAVAVAPPAPAVAPAPLAEPREDRR HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCC PLPSRRPLLRGDNPAPAPRPSLRPAVEPPAITPPAAPAYAPRPAPHAPLTAAAPAVEPEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VRPAAVEARKAPEIELAPPARLEPAPILRMEPSRSEAPAPTTDRRLDELTQRLDAALAHP CCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EPVEPTSTVAEPQLSLADLLGEAPEKAAEPESAPQDAAPKVEPRVEHKSEAAPEAVVNPE CCCCCCHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC PAIDSPQVRPSDRPLSRFLYQSRSRPEPRGGEDVRPRLDPLPRIERPSEDGVRPAAPARS CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPPLRPREFAFRPVEANPREPATREAPALDAPRREPPALREITREPLRPIEATPVLPRPG CCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC IGIEAKSEAKPEVKAEIKADAQLESKVDEEVPARPGFIPSVAPKAADALADTPAPAPEPK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC AKDPLDDFDAEMADLLGRSSARGH CCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLQQLFGSQLALPIRLAIAVVVIGALLAVTVLVMRRLTSRGRGPVRSGRAGPRLAVLDSV CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH AVDQRRRLILVRRDEVEHLLLVGGSSDIVVEHQIAVEDEAPAAAPAPAPALAASREAPAL HHHCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCHH QRPAGRRGLPPAAPVAPVALAAESVSAPLPAPEPAPAVAVAPPAPAVAPAPLAEPREDRR HCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHCC PLPSRRPLLRGDNPAPAPRPSLRPAVEPPAITPPAAPAYAPRPAPHAPLTAAAPAVEPEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VRPAAVEARKAPEIELAPPARLEPAPILRMEPSRSEAPAPTTDRRLDELTQRLDAALAHP CCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EPVEPTSTVAEPQLSLADLLGEAPEKAAEPESAPQDAAPKVEPRVEHKSEAAPEAVVNPE CCCCCCHHHHCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC PAIDSPQVRPSDRPLSRFLYQSRSRPEPRGGEDVRPRLDPLPRIERPSEDGVRPAAPARS CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPPLRPREFAFRPVEANPREPATREAPALDAPRREPPALREITREPLRPIEATPVLPRPG CCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC IGIEAKSEAKPEVKAEIKADAQLESKVDEEVPARPGFIPSVAPKAADALADTPAPAPEPK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC AKDPLDDFDAEMADLLGRSSARGH CCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA