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The map label for this gene is yfhF [C]

Identifier: 154248533

GI number: 154248533

Start: 5098873

End: 5099298

Strand: Reverse

Name: yfhF [C]

Synonym: Xaut_4614

Alternate gene names: 154248533

Gene position: 5099298-5098873 (Counterclockwise)

Preceding gene: 154248535

Following gene: 154248532

Centisome position: 96.05

GC content: 63.62

Gene sequence:

>426_bases
ATGAGTGTTGCTTCCGAAACGTCCACCGCAGCCCCGGCCCCTTCGCCTGCCAAGCGGAGCCTGCCGCCTGTGATCCGCAT
CACCGATGCGGCCGCCGAACAGTTGCGCGAGATCCTCGCGGCAGCGGAGCCGGGCACTGCGTTGCGCGTCGGCATTGAGA
ACGGCGGTTGCGCCGGCATGTCCTACAAGATGGATTTCACCACTGAGATCGCCCCCTTCGACTCGGTCGTCGAGGACAAG
GGCGTAAAGGTGGTGGTGGACACCAAGGCCGTGCTCTTCCTGCTCGGCACCGAGATGGACTACAAGACCGACAAGGTCTC
GTCCCAGTTTGTGTTCAATAATCCCAACCAGACCTCGTCCTGCGGCTGCGGTGAATCGGTCGCGATCACGCCGGTCGACA
TGAGCGCTGCGTCCGGCCAGGGCTGA

Upstream 100 bases:

>100_bases
TCTACCGCCAGATCATATGGAGCCTTGTGAGGGCGCCCCTCATCCTCCATTTATGGGATGTGCCCGCCGTCCTTGAAACG
GCAAGGCTCGGAGATTACCC

Downstream 100 bases:

>100_bases
ACACAGGCTCATTGCGGAGTTCAGCTGCGGTTCATCCGCACGGGGACAAGAGAAGCGGGCGGCTGAGGCCGCCCGGCGTG
AGGCGCGGGCGGGCCAGCCG

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSVASETSTAAPAPSPAKRSLPPVIRITDAAAEQLREILAAAEPGTALRVGIENGGCAGMSYKMDFTTEIAPFDSVVEDK
GVKVVVDTKAVLFLLGTEMDYKTDKVSSQFVFNNPNQTSSCGCGESVAITPVDMSAASGQG

Sequences:

>Translated_141_residues
MSVASETSTAAPAPSPAKRSLPPVIRITDAAAEQLREILAAAEPGTALRVGIENGGCAGMSYKMDFTTEIAPFDSVVEDK
GVKVVVDTKAVLFLLGTEMDYKTDKVSSQFVFNNPNQTSSCGCGESVAITPVDMSAASGQG
>Mature_140_residues
SVASETSTAAPAPSPAKRSLPPVIRITDAAAEQLREILAAAEPGTALRVGIENGGCAGMSYKMDFTTEIAPFDSVVEDKG
VKVVVDTKAVLFLLGTEMDYKTDKVSSQFVFNNPNQTSSCGCGESVAITPVDMSAASGQG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=122, Percent_Identity=40.9836065573771, Blast_Score=101, Evalue=2e-22,
Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=39.622641509434, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=44.7619047619048, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=37.7358490566038, Blast_Score=82, Evalue=9e-18,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=37.7358490566038, Blast_Score=77, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI25146411, Length=111, Percent_Identity=43.2432432432432, Blast_Score=109, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI193209025, Length=110, Percent_Identity=43.6363636363636, Blast_Score=109, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71998452, Length=123, Percent_Identity=32.520325203252, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=45.2830188679245, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24642263, Length=114, Percent_Identity=42.9824561403509, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24649697, Length=130, Percent_Identity=29.2307692307692, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 14591; Mature: 14459

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVASETSTAAPAPSPAKRSLPPVIRITDAAAEQLREILAAAEPGTALRVGIENGGCAGM
CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
SYKMDFTTEIAPFDSVVEDKGVKVVVDTKAVLFLLGTEMDYKTDKVSSQFVFNNPNQTSS
EEEECCCCCCCCCHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEECCCCCCCC
CGCGESVAITPVDMSAASGQG
CCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure 
SVASETSTAAPAPSPAKRSLPPVIRITDAAAEQLREILAAAEPGTALRVGIENGGCAGM
CCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCE
SYKMDFTTEIAPFDSVVEDKGVKVVVDTKAVLFLLGTEMDYKTDKVSSQFVFNNPNQTSS
EEEECCCCCCCCCHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCCCEEEECCCCCCCC
CGCGESVAITPVDMSAASGQG
CCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]