| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248528
Identifier: 154248528
GI number: 154248528
Start: 5094599
End: 5095663
Strand: Reverse
Name: 154248528
Synonym: Xaut_4608
Alternate gene names: NA
Gene position: 5095663-5094599 (Counterclockwise)
Preceding gene: 154248529
Following gene: 154248527
Centisome position: 95.98
GC content: 70.14
Gene sequence:
>1065_bases GTGATTCCATCGCCTCATGTCGAGCCCGATGGATCCTTTGCCCAGCGACCTTGCCGCAGCCCACGCCATGATCCTGGCGG AGCGTGCCGCGCGCAAGGAGGCCGAGGCGCTGGCGGCGCGGGCCCAGGCGCCGAACACCGGCACCGACGCGCTGATCGCG CGGCTGAAGCTGGAGATCGAGAAGCTCCGTCGCGAGCTCTACGGCACGCGGGCACGCGCTCGGAGCGCAAGGCGCGCCTC CTCGACCAGATGGAGATGCAGCTCGAAGACCTGGAAGCCGACGCCACCGAGGATGAGCTGGCGGCGGAAGCTGCAGCACG ATCCACCGATGTCCGGACCTTCCAGCGCAGCCGGCCCGCGCGCAAGCCCTTCCCCGACCACCTGTCGCGCGAGCGCGTCG TCGTCCCCGCGCCGGAGAGCTGCCCGTGCTGCGGCTCGTCCCGGCTGGTGAAGCTCGGCGAGGACGTCACCGAGACGCTG GAGGTGATCCCGCGCCAGTGGAAGGTGATCCAGACGGTGCGGGAACGCTTCTCCTGCCGGGCCTGCGAGGCGGTCACCCA GCCGCCGGCGCCGTTCCATGTCATCCCCCGTGGCCATGCCGGACCGAACCTTCTGGCGATGGTGCTGTTCGAGAAGTTCG GCCAGCACCAGCCGTTGAACCGGCAGAGCGAGCGCTATGCCTGCGAGGGCATCGACCTGCCGCTGTCAACGCTGGCGGAT CATGTCGGGGCCTGTGCCGCGGCGCTGCGCCCGCTCCACGCGCTGATCGAGCGCCATGTCATGTCCGCGGCACGCCTGCA TGGCGACGACACGCCGGTGCCGATCCTGGCGAAGGGCAAGACCGACACCGGCCGGGCCTGGGTCTATGTGCGCGATGACC GCCCCTTTGGCGGCGCCGATCCGCCGGCGGTGCTGTTTAAGGCGTCCCGCGACCGCTCGGGCGATCACCCGCAAGAGCAT CTGACGCGCTTCGCTGGCATCCTGCAGGCCGATGCCTATGCCGGCTACAATCGCCTGCTCGCTCCGGATCGCCAGCCCGG ACCGATCACGGAGGCCCTGTGCTAG
Upstream 100 bases:
>100_bases GCTCGGCTATCTCCTGGAGGGCATCGATTGGCGGCATCCGCAGCAGGCGTGGAGACCGGGCGCGTCGGGGTGATTTGGGC TTGGCGCGGTGCCCGGGAAT
Downstream 100 bases:
>100_bases AGCCATGCGCGCCGCAAGTTCTTCGAGCTTGCCGACATCGCCGCGAGCAGCCGACGCGGGCGCAATGCCGCGCCGATCTC ACCGATCGCGCTGGAGGCCG
Product: transposase IS66
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MIPSPHVEPDGSFAQRPCRSPRHDPGGACRAQGGRGAGGAGPGAEHRHRRADRAAEAGDREAPSRALRHAGTRSERKARL LDQMEMQLEDLEADATEDELAAEAAARSTDVRTFQRSRPARKPFPDHLSRERVVVPAPESCPCCGSSRLVKLGEDVTETL EVIPRQWKVIQTVRERFSCRACEAVTQPPAPFHVIPRGHAGPNLLAMVLFEKFGQHQPLNRQSERYACEGIDLPLSTLAD HVGACAAALRPLHALIERHVMSAARLHGDDTPVPILAKGKTDTGRAWVYVRDDRPFGGADPPAVLFKASRDRSGDHPQEH LTRFAGILQADAYAGYNRLLAPDRQPGPITEALC
Sequences:
>Translated_354_residues MIPSPHVEPDGSFAQRPCRSPRHDPGGACRAQGGRGAGGAGPGAEHRHRRADRAAEAGDREAPSRALRHAGTRSERKARL LDQMEMQLEDLEADATEDELAAEAAARSTDVRTFQRSRPARKPFPDHLSRERVVVPAPESCPCCGSSRLVKLGEDVTETL EVIPRQWKVIQTVRERFSCRACEAVTQPPAPFHVIPRGHAGPNLLAMVLFEKFGQHQPLNRQSERYACEGIDLPLSTLAD HVGACAAALRPLHALIERHVMSAARLHGDDTPVPILAKGKTDTGRAWVYVRDDRPFGGADPPAVLFKASRDRSGDHPQEH LTRFAGILQADAYAGYNRLLAPDRQPGPITEALC >Mature_354_residues MIPSPHVEPDGSFAQRPCRSPRHDPGGACRAQGGRGAGGAGPGAEHRHRRADRAAEAGDREAPSRALRHAGTRSERKARL LDQMEMQLEDLEADATEDELAAEAAARSTDVRTFQRSRPARKPFPDHLSRERVVVPAPESCPCCGSSRLVKLGEDVTETL EVIPRQWKVIQTVRERFSCRACEAVTQPPAPFHVIPRGHAGPNLLAMVLFEKFGQHQPLNRQSERYACEGIDLPLSTLAD HVGACAAALRPLHALIERHVMSAARLHGDDTPVPILAKGKTDTGRAWVYVRDDRPFGGADPPAVLFKASRDRSGDHPQEH LTRFAGILQADAYAGYNRLLAPDRQPGPITEALC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 38654; Mature: 38654
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSPHVEPDGSFAQRPCRSPRHDPGGACRAQGGRGAGGAGPGAEHRHRRADRAAEAGDR CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EAPSRALRHAGTRSERKARLLDQMEMQLEDLEADATEDELAAEAAARSTDVRTFQRSRPA CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC RKPFPDHLSRERVVVPAPESCPCCGSSRLVKLGEDVTETLEVIPRQWKVIQTVRERFSCR CCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACEAVTQPPAPFHVIPRGHAGPNLLAMVLFEKFGQHQPLNRQSERYACEGIDLPLSTLAD HHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHH HVGACAAALRPLHALIERHVMSAARLHGDDTPVPILAKGKTDTGRAWVYVRDDRPFGGAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCC PPAVLFKASRDRSGDHPQEHLTRFAGILQADAYAGYNRLLAPDRQPGPITEALC CHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCC >Mature Secondary Structure MIPSPHVEPDGSFAQRPCRSPRHDPGGACRAQGGRGAGGAGPGAEHRHRRADRAAEAGDR CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC EAPSRALRHAGTRSERKARLLDQMEMQLEDLEADATEDELAAEAAARSTDVRTFQRSRPA CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC RKPFPDHLSRERVVVPAPESCPCCGSSRLVKLGEDVTETLEVIPRQWKVIQTVRERFSCR CCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACEAVTQPPAPFHVIPRGHAGPNLLAMVLFEKFGQHQPLNRQSERYACEGIDLPLSTLAD HHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHH HVGACAAALRPLHALIERHVMSAARLHGDDTPVPILAKGKTDTGRAWVYVRDDRPFGGAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCC PPAVLFKASRDRSGDHPQEHLTRFAGILQADAYAGYNRLLAPDRQPGPITEALC CHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]