| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248496
Identifier: 154248496
GI number: 154248496
Start: 5058053
End: 5060047
Strand: Direct
Name: 154248496
Synonym: Xaut_4576
Alternate gene names: NA
Gene position: 5058053-5060047 (Clockwise)
Preceding gene: 154248495
Following gene: 154248497
Centisome position: 95.27
GC content: 57.34
Gene sequence:
>1995_bases ATGGATAATCCTAGACTTGTCGGCCACATCGTCGCTGTTCAGGGGTTTCGGGTGAAAGTCGAGCTTTTGCCCGAAACCCG CTCGGCGCTTCGCGCGACCCTTGACGGCGTCCAGGTCGCGATCGCCATCAACGCCTACCTGACATTTTCATTGGGGGCGG GCGAAACCGTCATCGGCATCATTACCGACCTCGAGGCGCGCGAGAGCTTCGACCCTGCAAGTGGCGACGACCTCAGCCTT GAGTTGATGAAGTCTCGCCGGATCGCCAGCGTGCAGTTGCTGGGCACGATCGAGAACATTGATGACGACGCCTCCTTCAG CCCGGGCATATCCGTTCTGCCAACCCTCGATACCCCTGCTGAGATCGGATCGCCGGCCGTGCTGCGCGCTGTGTTCGAGC TTCCGCCGCGGCGCAATAGGCCAGAAGGCTATGATGACAAGGACTTCGACTACGACCTGAAAATCGGGTTTCCAACGGGC CAGACGCGCAATGTCGTGCGCGCCTCCTACAACGATCTGTTTTCGCGCCCTCTGGCGATCGTCGGCAACACCGGCTCGGG CAAGTCCTTTTCCGTTTCCAGCCTGATCCAGAAGGCGATGAAGGCGCTCGATGGTGCCGCCGAGGAGCCGCATGTCTTTA TCCTCGACATTAATGGCGAGTATGAAAAGGCATTCCCAACAGGCAAGACCGTCACACGATTGCCCGATCGCATCTACCTC AACGGTGAAGAATTCGGCCTTCCACTCTGGTTTCTCAATGCTGAAGAGATCTGCGCTTGGTTGAGCGCTGCCGAACAAAC GCAGGAGCCGGTCCTGAAGGATTGGTGGGCGATCGCGAAGGGCGGGAATGCTGATGAGGTTTCGAATCTTAATACATTCC AGAGTGCTTTAAGCTCAATCGAAAAGCTGCTTTCCGATCTCCAAAAGATACAACGGAAGTCGGCTGGTTCATATTGCGAT CTGATTGTAGGCTATCTGGCGAATTCCGACATCGATACAGCCTCATTTGAAACTCTGTTCGCATCGCACAAAGCGATCAC CGGTTTCAATCAAGAGGTCCTCGCGAATGCTGCTCAGATCGAAGCCGAGGCTCGAAAGCTCCAGGATGAAATCCGCGCAA AGATCATCGGCGGCAGCCATGTCGCCGAGACTGCCGTTCGGACAGCCGATTCACCGTTGCGCATCTCCCGTTCGACGTTG ACAGATCCATCCCTGATCAATCGAGCGGTGTCCAAGGAAGATACCATAAGGGTCGATGCACACCTCACGACGTTGAAACT GAGGTTGAAGACGCGCCTCGACGATAAACGCTGGCATTCGTTTCTCAATTATGAGAACGCCGAAACTAGCATCCCGGATC TGGCATCGTGGTTTTCCCGTTTTGGTCTCGGAAATGCGGGCGGGCCTAAGGTGTCGGTGCTCGACTTATCCATGTTGGGA AACGAGATTCTCCCTTATGCTTGCGCCGTCATCGGGCGCGTACTCCTCGAGGCAAGGGAGCGATTGCCGGCGGCATCACG CTATAAGCATCCTTGGGTGCTCGTCCTGGAGGAGGCGCACAACTACGCGCGGCCGGCGCGATCGGACGAAGACCGCGGCC ATCGCCTCGCACGTCTCGCCTATGAGCGTATCGCCAAGGAGGGACGGAAGTTTGGCCTCTCACTGATCATCGCCAGCCAG CGACCGAGCGAGATCAGCCAGACAATTATCAGCCAGTGTGCCAACTTCATCAGCCATCGTCTGCAGAACCCGGACGACAT CGACCATTTCCGACGCATCATCCCGATGCAGGCGCGGCGTTTGCTCGATCAGGTGACGATTTTGTCGTCGGGCGAGGCGA TCGTTTTCGGAAGCGCGTTCCATATCCCGGCGCGGGTTCAGTTCGATCGACCGGAGCCTGGCCCCTATAGCCAGACGGCA GCGCCGTACCACGAATGGTCGAAGGAAAGAGCTCCGTTTCCTCTGCGCCAAATCATTGACGCTTGGGGCGCATAG
Upstream 100 bases:
>100_bases CCGACGTCCAATGGCTCGACGATTTCTTGCGTCTGCGTCGTTTTGAAAAGCAGTTCGCCTCGTCTGCAATGCCCGCCGAA CCCGATACGGGGGCTTGACC
Downstream 100 bases:
>100_bases CTCAGAGGAGCCATCTGCCCCATGTCTCTCAAGCCATTCGACTCCCTTCTCGAGCCCGATCCCCGGTTCGCTGACCTCTA TGTTATTGAGCAAGATGTCG
Product: ATPase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 664
Protein sequence:
>664_residues MDNPRLVGHIVAVQGFRVKVELLPETRSALRATLDGVQVAIAINAYLTFSLGAGETVIGIITDLEARESFDPASGDDLSL ELMKSRRIASVQLLGTIENIDDDASFSPGISVLPTLDTPAEIGSPAVLRAVFELPPRRNRPEGYDDKDFDYDLKIGFPTG QTRNVVRASYNDLFSRPLAIVGNTGSGKSFSVSSLIQKAMKALDGAAEEPHVFILDINGEYEKAFPTGKTVTRLPDRIYL NGEEFGLPLWFLNAEEICAWLSAAEQTQEPVLKDWWAIAKGGNADEVSNLNTFQSALSSIEKLLSDLQKIQRKSAGSYCD LIVGYLANSDIDTASFETLFASHKAITGFNQEVLANAAQIEAEARKLQDEIRAKIIGGSHVAETAVRTADSPLRISRSTL TDPSLINRAVSKEDTIRVDAHLTTLKLRLKTRLDDKRWHSFLNYENAETSIPDLASWFSRFGLGNAGGPKVSVLDLSMLG NEILPYACAVIGRVLLEARERLPAASRYKHPWVLVLEEAHNYARPARSDEDRGHRLARLAYERIAKEGRKFGLSLIIASQ RPSEISQTIISQCANFISHRLQNPDDIDHFRRIIPMQARRLLDQVTILSSGEAIVFGSAFHIPARVQFDRPEPGPYSQTA APYHEWSKERAPFPLRQIIDAWGA
Sequences:
>Translated_664_residues MDNPRLVGHIVAVQGFRVKVELLPETRSALRATLDGVQVAIAINAYLTFSLGAGETVIGIITDLEARESFDPASGDDLSL ELMKSRRIASVQLLGTIENIDDDASFSPGISVLPTLDTPAEIGSPAVLRAVFELPPRRNRPEGYDDKDFDYDLKIGFPTG QTRNVVRASYNDLFSRPLAIVGNTGSGKSFSVSSLIQKAMKALDGAAEEPHVFILDINGEYEKAFPTGKTVTRLPDRIYL NGEEFGLPLWFLNAEEICAWLSAAEQTQEPVLKDWWAIAKGGNADEVSNLNTFQSALSSIEKLLSDLQKIQRKSAGSYCD LIVGYLANSDIDTASFETLFASHKAITGFNQEVLANAAQIEAEARKLQDEIRAKIIGGSHVAETAVRTADSPLRISRSTL TDPSLINRAVSKEDTIRVDAHLTTLKLRLKTRLDDKRWHSFLNYENAETSIPDLASWFSRFGLGNAGGPKVSVLDLSMLG NEILPYACAVIGRVLLEARERLPAASRYKHPWVLVLEEAHNYARPARSDEDRGHRLARLAYERIAKEGRKFGLSLIIASQ RPSEISQTIISQCANFISHRLQNPDDIDHFRRIIPMQARRLLDQVTILSSGEAIVFGSAFHIPARVQFDRPEPGPYSQTA APYHEWSKERAPFPLRQIIDAWGA >Mature_664_residues MDNPRLVGHIVAVQGFRVKVELLPETRSALRATLDGVQVAIAINAYLTFSLGAGETVIGIITDLEARESFDPASGDDLSL ELMKSRRIASVQLLGTIENIDDDASFSPGISVLPTLDTPAEIGSPAVLRAVFELPPRRNRPEGYDDKDFDYDLKIGFPTG QTRNVVRASYNDLFSRPLAIVGNTGSGKSFSVSSLIQKAMKALDGAAEEPHVFILDINGEYEKAFPTGKTVTRLPDRIYL NGEEFGLPLWFLNAEEICAWLSAAEQTQEPVLKDWWAIAKGGNADEVSNLNTFQSALSSIEKLLSDLQKIQRKSAGSYCD LIVGYLANSDIDTASFETLFASHKAITGFNQEVLANAAQIEAEARKLQDEIRAKIIGGSHVAETAVRTADSPLRISRSTL TDPSLINRAVSKEDTIRVDAHLTTLKLRLKTRLDDKRWHSFLNYENAETSIPDLASWFSRFGLGNAGGPKVSVLDLSMLG NEILPYACAVIGRVLLEARERLPAASRYKHPWVLVLEEAHNYARPARSDEDRGHRLARLAYERIAKEGRKFGLSLIIASQ RPSEISQTIISQCANFISHRLQNPDDIDHFRRIIPMQARRLLDQVTILSSGEAIVFGSAFHIPARVQFDRPEPGPYSQTA APYHEWSKERAPFPLRQIIDAWGA
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 73398; Mature: 73398
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNPRLVGHIVAVQGFRVKVELLPETRSALRATLDGVQVAIAINAYLTFSLGAGETVIGI CCCCEEEEEEEEECCEEEEEEECCHHHHHHHHHHCCEEEEEEEEEEEEEEECCCCEEEEE ITDLEARESFDPASGDDLSLELMKSRRIASVQLLGTIENIDDDASFSPGISVLPTLDTPA EECCHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCEEEECCCCCH EIGSPAVLRAVFELPPRRNRPEGYDDKDFDYDLKIGFPTGQTRNVVRASYNDLFSRPLAI HHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEE VGNTGSGKSFSVSSLIQKAMKALDGAAEEPHVFILDINGEYEKAFPTGKTVTRLPDRIYL EECCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCCHHHHCCCEEEE NGEEFGLPLWFLNAEEICAWLSAAEQTQEPVLKDWWAIAKGGNADEVSNLNTFQSALSSI CCCCCCCEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EKLLSDLQKIQRKSAGSYCDLIVGYLANSDIDTASFETLFASHKAITGFNQEVLANAAQI HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAEARKLQDEIRAKIIGGSHVAETAVRTADSPLRISRSTLTDPSLINRAVSKEDTIRVDA HHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEECHHCCCCHHHHHHHHCCCCCEEEEE HLTTLKLRLKTRLDDKRWHSFLNYENAETSIPDLASWFSRFGLGNAGGPKVSVLDLSMLG EEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHC NEILPYACAVIGRVLLEARERLPAASRYKHPWVLVLEEAHNYARPARSDEDRGHRLARLA CHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECHHHHCCCCCCCCHHHHHHHHHH YERIAKEGRKFGLSLIIASQRPSEISQTIISQCANFISHRLQNPDDIDHFRRIIPMQARR HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLDQVTILSSGEAIVFGSAFHIPARVQFDRPEPGPYSQTAAPYHEWSKERAPFPLRQIID HHHHHHHCCCCCEEEEECEECCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHH AWGA HHCC >Mature Secondary Structure MDNPRLVGHIVAVQGFRVKVELLPETRSALRATLDGVQVAIAINAYLTFSLGAGETVIGI CCCCEEEEEEEEECCEEEEEEECCHHHHHHHHHHCCEEEEEEEEEEEEEEECCCCEEEEE ITDLEARESFDPASGDDLSLELMKSRRIASVQLLGTIENIDDDASFSPGISVLPTLDTPA EECCHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCEEEECCCCCH EIGSPAVLRAVFELPPRRNRPEGYDDKDFDYDLKIGFPTGQTRNVVRASYNDLFSRPLAI HHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEE VGNTGSGKSFSVSSLIQKAMKALDGAAEEPHVFILDINGEYEKAFPTGKTVTRLPDRIYL EECCCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCCCCHHHHCCCEEEE NGEEFGLPLWFLNAEEICAWLSAAEQTQEPVLKDWWAIAKGGNADEVSNLNTFQSALSSI CCCCCCCEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EKLLSDLQKIQRKSAGSYCDLIVGYLANSDIDTASFETLFASHKAITGFNQEVLANAAQI HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH EAEARKLQDEIRAKIIGGSHVAETAVRTADSPLRISRSTLTDPSLINRAVSKEDTIRVDA HHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCEECHHCCCCHHHHHHHHCCCCCEEEEE HLTTLKLRLKTRLDDKRWHSFLNYENAETSIPDLASWFSRFGLGNAGGPKVSVLDLSMLG EEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHC NEILPYACAVIGRVLLEARERLPAASRYKHPWVLVLEEAHNYARPARSDEDRGHRLARLA CHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEEECHHHHCCCCCCCCHHHHHHHHHH YERIAKEGRKFGLSLIIASQRPSEISQTIISQCANFISHRLQNPDDIDHFRRIIPMQARR HHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LLDQVTILSSGEAIVFGSAFHIPARVQFDRPEPGPYSQTAAPYHEWSKERAPFPLRQIID HHHHHHHCCCCCEEEEECEECCCEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHH AWGA HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]