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The map label for this gene is cisA [H]

Identifier: 154248492

GI number: 154248492

Start: 5053666

End: 5055420

Strand: Reverse

Name: cisA [H]

Synonym: Xaut_4572

Alternate gene names: 154248492

Gene position: 5055420-5053666 (Counterclockwise)

Preceding gene: 154248504

Following gene: 154248491

Centisome position: 95.22

GC content: 61.37

Gene sequence:

>1755_bases
TTGAAAGTCGCGATCTACGCCCGCTATTCGTCCGACAATCAGCGCGACGCCTCCATCGCCGACCAGCTCCGCATCTGCCG
CCTCCATGCCGAGAAGCAGGGTTGGCAGGTGGTCGAGGAATATACCGACCACGCCATTTCCGGCGCCTCCCTTCTTCGTC
CCGGTATCCAAGCCCTGATCTCGGACGCAGCGCGCGGCCGTTTCCAGTACGTGCTGGCCGAGGCGATGGATCGTCTTTCG
CGCGATCAGGAGGACATTGCCGGCCTCTACAAGCGCATGGCCTATGCGGACGTGAAGATCGTCACGCTCTCCGAGGGCGA
AGTCACGCATCTGCATGTCGGTCTGAAGGGCACGATGAACGCCCTGTTCCTCAAGGATCTCGCCGACAAGACGCGCCGAG
GCCAGCGCGGGCGCGTCGAGATGGGCAAGTCCGGCGGCGGCAACGCCTATGGCTATGATGTGGTGAAGAAGTTCGACGCC
GGCGGCGAGCCCATACGCGGCGACCGGACCATCAACGAGTTTCAGGCGGGGGTCATCCGCCGCATCTTCCGTGACTATTC
GGCCGGAAAGTCGGCGAAGCGAATTGCCTTCGAGCTGAACAAGGAGGGCATCTCCGCGCCGGGCGGTGGAGAATGGGGCT
TCAGCACGATCAACGGCAATCCGAAGCGCGGCAACGGAATCCTCAACAACGAGATGTACGTTGGCAAGCTGGTCTGGAAC
CGTCAGCGCTTCATCAAAGACCCGGACACTGGCAAGCGCCAGGCGCGCATAAACCCGGAGGAGGACTGGATCACCCAGGA
TGTGCCCGAGTTGCGCATCCTTGACGACGAGCTGTGGCGGGCGGTCAAGGATCGCCAGAAAGCGGTCAAACTGAACCGTA
GCGACAACGGCGAGACCGAGAACCACTTCCGGGAACGTCGGCGCCCCAAATACCTTTTCTCGGGCCTGACCAAGTGCGCC
TGCTGTGGCGGTGGCTATTCGATGATCTCGGCTGACCTGGTTGGCTGCTCGACAGCCCGGAATAAGGGCACTTGCGACAA
TCGCAGGAACATCCGGCGCGATCAGTTCGAGGCGCGCGTCCTGAACGCGCTGCGCCATCACCTGATGGACCCAGCGCTGT
TCAAAGAATTCTGCGAGGAATTCACCCGCGAGATGAATCGGCTGCGCATGGAAGGCCGAGCGTCGATCGATGCGGCCGAG
GCCGAGATCAAGCGAATCGACCGGGAACTCGACAAGTTGATGAAGCTCATCCTCGCGTCCGACAGCGACGACGCCCCCAC
CCGGATGATGAAGCAGATGAAGGAGCTGGAGGCTCGCCAGAAGGAGCTAAAAGCGTTCCTGCAGGACGCCCAGGAGCCGC
CGCCCCTCCTGCATCCAAACATGGCGCATCACTACCACGCCCAGGTGGATGAGCTGTATGCGGCGCTTCAGGAGGATTCG
GAGGAAAAGCGGATGACGGCGGCCGACCTGATTCGCTCGCTGGTGAAGGAGATCATCCTGACGCCGGCAGAAGGCGAGCT
TCGGGTCGACGTGCGAGGTGATCTGGCTGGAATTCTTGCGATTTCGCTCAAAAGCAAACGGCCCGCCAGAGGGGCGGGCC
GATCGCAAGTCGAGATGGTTGCGGGGACCTGCTCTGATCAGAACTTGCGAACGCAAAAAAGCCGCCCGGTGGGGGCGGCT
GATTTGCGCGATTTGGTATCGCAATTTGAGATGGTTGCGGGGGTAGGATTTGAACCTACGACCTTCAGGTTATGA

Upstream 100 bases:

>100_bases
TTGGCTCGCCTGCTCGCCCGTCGTGCTGCGCGGGAGGTGTTCGAAGAGCAGATGAAGGAACGCAGCACGACGCGCTCCTG
ACACCTCAGGAGAGTGCGCT

Downstream 100 bases:

>100_bases
GCCTGACGAGCTACCGGGCTGCTCCACCCCGCGTCAATTGTCGAGCCGGCGAACCGCCCGTCGACGAGGCGTATGTAGCA
ACCCTCGTTCCCGATTGAAA

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MKVAIYARYSSDNQRDASIADQLRICRLHAEKQGWQVVEEYTDHAISGASLLRPGIQALISDAARGRFQYVLAEAMDRLS
RDQEDIAGLYKRMAYADVKIVTLSEGEVTHLHVGLKGTMNALFLKDLADKTRRGQRGRVEMGKSGGGNAYGYDVVKKFDA
GGEPIRGDRTINEFQAGVIRRIFRDYSAGKSAKRIAFELNKEGISAPGGGEWGFSTINGNPKRGNGILNNEMYVGKLVWN
RQRFIKDPDTGKRQARINPEEDWITQDVPELRILDDELWRAVKDRQKAVKLNRSDNGETENHFRERRRPKYLFSGLTKCA
CCGGGYSMISADLVGCSTARNKGTCDNRRNIRRDQFEARVLNALRHHLMDPALFKEFCEEFTREMNRLRMEGRASIDAAE
AEIKRIDRELDKLMKLILASDSDDAPTRMMKQMKELEARQKELKAFLQDAQEPPPLLHPNMAHHYHAQVDELYAALQEDS
EEKRMTAADLIRSLVKEIILTPAEGELRVDVRGDLAGILAISLKSKRPARGAGRSQVEMVAGTCSDQNLRTQKSRPVGAA
DLRDLVSQFEMVAGVGFEPTTFRL

Sequences:

>Translated_584_residues
MKVAIYARYSSDNQRDASIADQLRICRLHAEKQGWQVVEEYTDHAISGASLLRPGIQALISDAARGRFQYVLAEAMDRLS
RDQEDIAGLYKRMAYADVKIVTLSEGEVTHLHVGLKGTMNALFLKDLADKTRRGQRGRVEMGKSGGGNAYGYDVVKKFDA
GGEPIRGDRTINEFQAGVIRRIFRDYSAGKSAKRIAFELNKEGISAPGGGEWGFSTINGNPKRGNGILNNEMYVGKLVWN
RQRFIKDPDTGKRQARINPEEDWITQDVPELRILDDELWRAVKDRQKAVKLNRSDNGETENHFRERRRPKYLFSGLTKCA
CCGGGYSMISADLVGCSTARNKGTCDNRRNIRRDQFEARVLNALRHHLMDPALFKEFCEEFTREMNRLRMEGRASIDAAE
AEIKRIDRELDKLMKLILASDSDDAPTRMMKQMKELEARQKELKAFLQDAQEPPPLLHPNMAHHYHAQVDELYAALQEDS
EEKRMTAADLIRSLVKEIILTPAEGELRVDVRGDLAGILAISLKSKRPARGAGRSQVEMVAGTCSDQNLRTQKSRPVGAA
DLRDLVSQFEMVAGVGFEPTTFRL
>Mature_584_residues
MKVAIYARYSSDNQRDASIADQLRICRLHAEKQGWQVVEEYTDHAISGASLLRPGIQALISDAARGRFQYVLAEAMDRLS
RDQEDIAGLYKRMAYADVKIVTLSEGEVTHLHVGLKGTMNALFLKDLADKTRRGQRGRVEMGKSGGGNAYGYDVVKKFDA
GGEPIRGDRTINEFQAGVIRRIFRDYSAGKSAKRIAFELNKEGISAPGGGEWGFSTINGNPKRGNGILNNEMYVGKLVWN
RQRFIKDPDTGKRQARINPEEDWITQDVPELRILDDELWRAVKDRQKAVKLNRSDNGETENHFRERRRPKYLFSGLTKCA
CCGGGYSMISADLVGCSTARNKGTCDNRRNIRRDQFEARVLNALRHHLMDPALFKEFCEEFTREMNRLRMEGRASIDAAE
AEIKRIDRELDKLMKLILASDSDDAPTRMMKQMKELEARQKELKAFLQDAQEPPPLLHPNMAHHYHAQVDELYAALQEDS
EEKRMTAADLIRSLVKEIILTPAEGELRVDVRGDLAGILAISLKSKRPARGAGRSQVEMVAGTCSDQNLRTQKSRPVGAA
DLRDLVSQFEMVAGVGFEPTTFRL

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 65792; Mature: 65792

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIYARYSSDNQRDASIADQLRICRLHAEKQGWQVVEEYTDHAISGASLLRPGIQALI
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SDAARGRFQYVLAEAMDRLSRDQEDIAGLYKRMAYADVKIVTLSEGEVTHLHVGLKGTMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCHHHHH
ALFLKDLADKTRRGQRGRVEMGKSGGGNAYGYDVVKKFDAGGEPIRGDRTINEFQAGVIR
HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RIFRDYSAGKSAKRIAFELNKEGISAPGGGEWGFSTINGNPKRGNGILNNEMYVGKLVWN
HHHHHHHCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
RQRFIKDPDTGKRQARINPEEDWITQDVPELRILDDELWRAVKDRQKAVKLNRSDNGETE
HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
NHFRERRRPKYLFSGLTKCACCGGGYSMISADLVGCSTARNKGTCDNRRNIRRDQFEARV
HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHH
LNALRHHLMDPALFKEFCEEFTREMNRLRMEGRASIDAAEAEIKRIDRELDKLMKLILAS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DSDDAPTRMMKQMKELEARQKELKAFLQDAQEPPPLLHPNMAHHYHAQVDELYAALQEDS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EEKRMTAADLIRSLVKEIILTPAEGELRVDVRGDLAGILAISLKSKRPARGAGRSQVEMV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHEEEECCCCCCCCCCCCHHHHH
AGTCSDQNLRTQKSRPVGAADLRDLVSQFEMVAGVGFEPTTFRL
HCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKVAIYARYSSDNQRDASIADQLRICRLHAEKQGWQVVEEYTDHAISGASLLRPGIQALI
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SDAARGRFQYVLAEAMDRLSRDQEDIAGLYKRMAYADVKIVTLSEGEVTHLHVGLKGTMN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEECCHHHHH
ALFLKDLADKTRRGQRGRVEMGKSGGGNAYGYDVVKKFDAGGEPIRGDRTINEFQAGVIR
HHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RIFRDYSAGKSAKRIAFELNKEGISAPGGGEWGFSTINGNPKRGNGILNNEMYVGKLVWN
HHHHHHHCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
RQRFIKDPDTGKRQARINPEEDWITQDVPELRILDDELWRAVKDRQKAVKLNRSDNGETE
HHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHH
NHFRERRRPKYLFSGLTKCACCGGGYSMISADLVGCSTARNKGTCDNRRNIRRDQFEARV
HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHH
LNALRHHLMDPALFKEFCEEFTREMNRLRMEGRASIDAAEAEIKRIDRELDKLMKLILAS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DSDDAPTRMMKQMKELEARQKELKAFLQDAQEPPPLLHPNMAHHYHAQVDELYAALQEDS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
EEKRMTAADLIRSLVKEIILTPAEGELRVDVRGDLAGILAISLKSKRPARGAGRSQVEMV
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHEEEECCCCCCCCCCCCHHHHH
AGTCSDQNLRTQKSRPVGAADLRDLVSQFEMVAGVGFEPTTFRL
HCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]