| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248460
Identifier: 154248460
GI number: 154248460
Start: 5018562
End: 5019290
Strand: Reverse
Name: 154248460
Synonym: Xaut_4540
Alternate gene names: NA
Gene position: 5019290-5018562 (Counterclockwise)
Preceding gene: 154248461
Following gene: 154248458
Centisome position: 94.54
GC content: 67.9
Gene sequence:
>729_bases GTGATCAGCCTGATTGCCGGTGCCCTGCTGCTGATCATCGGCCTCTACGGCCTCAAGATCTGGACCAAGGCCGACCCCAA GGTGCTGATGGCCATCCTCATGCGCTCGCTGGCCTATGCGGCTTTGCTGGGCGCGGCGGGGGCGCTGGCCATGGGACGGT TCGGGGCGGCGATCCCGCTGGCGGCGGTGGGCATCGGCCTGCTGGGCCGGCTCGATCCGCAGGGGGTGGGCGGCTATCTC GGCAGCCTGTTCCGTAAGCGAGGCGCACCGCAGGTCTCGAAGGTGCGCACCCAGTTGCTGGAGATGGAGCTGGACCTTGC CAGCGGTGAGATGAAGGGCGTCGTCGTTTCCGGTCCCGATGCGGGCACCACGCTCGATGCGCTGGACGTGCCGGCCCTGC TTGCCATGCGCCGCATCTGCGATCCGCAATCGCTGGCGCTACTCGAAGCTTATCTCGACCGCCGGGCGCCCGCCTGGCGT GAGCACGCACAGACGGATGCGGGTGGCGGGAATATGGGCGCGGGTGAGAGCGTCCGCGCGGGCAGCGACGCGATGACCGA AGAGGAAGCCTATCAGATCCTTGGCCTTGAGCCGGGTGCGGACACCGAGGCTGTCCGCGCGGCGCACCGCGCCCTCATGA AGAGGCTCCACCCCGACCTGGGCGGATCCAGCTATCTCGCGTCGAGGATAAATCGCGCCAAGGACGTGATCTTGCGCAAG CATGGCTGA
Upstream 100 bases:
>100_bases ACGCGATGCCGGGGCGCGCCTGCTCATCGCCGCGCTCGGCCGCTGAGGCGGACATCCTGAGCCCACACCTTGAACCCGTT CGACCTGTGAGGTGGTTTTC
Downstream 100 bases:
>100_bases GTCCCGTGCATGACTTCAATTCTTGAAAGTCATACAGTCGAAGTCATTACGCTTGAGTAAACGGCAGGCTTCGCGGGCGC CCTTTTCATCCAGCCCGGCA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ-Like; DNAJ Domain Protein; Heat Shock Protein DNAJ N-Terminal; Heat Shock Protein DNAJ; DNAJ-Class Molecular Chaperone; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ N-Terminal Domain Protein; Heat Shock Protein
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MISLIAGALLLIIGLYGLKIWTKADPKVLMAILMRSLAYAALLGAAGALAMGRFGAAIPLAAVGIGLLGRLDPQGVGGYL GSLFRKRGAPQVSKVRTQLLEMELDLASGEMKGVVVSGPDAGTTLDALDVPALLAMRRICDPQSLALLEAYLDRRAPAWR EHAQTDAGGGNMGAGESVRAGSDAMTEEEAYQILGLEPGADTEAVRAAHRALMKRLHPDLGGSSYLASRINRAKDVILRK HG
Sequences:
>Translated_242_residues MISLIAGALLLIIGLYGLKIWTKADPKVLMAILMRSLAYAALLGAAGALAMGRFGAAIPLAAVGIGLLGRLDPQGVGGYL GSLFRKRGAPQVSKVRTQLLEMELDLASGEMKGVVVSGPDAGTTLDALDVPALLAMRRICDPQSLALLEAYLDRRAPAWR EHAQTDAGGGNMGAGESVRAGSDAMTEEEAYQILGLEPGADTEAVRAAHRALMKRLHPDLGGSSYLASRINRAKDVILRK HG >Mature_242_residues MISLIAGALLLIIGLYGLKIWTKADPKVLMAILMRSLAYAALLGAAGALAMGRFGAAIPLAAVGIGLLGRLDPQGVGGYL GSLFRKRGAPQVSKVRTQLLEMELDLASGEMKGVVVSGPDAGTTLDALDVPALLAMRRICDPQSLALLEAYLDRRAPAWR EHAQTDAGGGNMGAGESVRAGSDAMTEEEAYQILGLEPGADTEAVRAAHRALMKRLHPDLGGSSYLASRINRAKDVILRK HG
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25377; Mature: 25377
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLIAGALLLIIGLYGLKIWTKADPKVLMAILMRSLAYAALLGAAGALAMGRFGAAIPL CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH AAVGIGLLGRLDPQGVGGYLGSLFRKRGAPQVSKVRTQLLEMELDLASGEMKGVVVSGPD HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC AGTTLDALDVPALLAMRRICDPQSLALLEAYLDRRAPAWREHAQTDAGGGNMGAGESVRA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC GSDAMTEEEAYQILGLEPGADTEAVRAAHRALMKRLHPDLGGSSYLASRINRAKDVILRK CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC HG CC >Mature Secondary Structure MISLIAGALLLIIGLYGLKIWTKADPKVLMAILMRSLAYAALLGAAGALAMGRFGAAIPL CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH AAVGIGLLGRLDPQGVGGYLGSLFRKRGAPQVSKVRTQLLEMELDLASGEMKGVVVSGPD HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC AGTTLDALDVPALLAMRRICDPQSLALLEAYLDRRAPAWREHAQTDAGGGNMGAGESVRA CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCC GSDAMTEEEAYQILGLEPGADTEAVRAAHRALMKRLHPDLGGSSYLASRINRAKDVILRK CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC HG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA