Click here to switch to the map view.

The map label for this gene is argD1 [H]

Identifier: 154248453

GI number: 154248453

Start: 5010382

End: 5011083

Strand: Reverse

Name: argD1 [H]

Synonym: Xaut_4533

Alternate gene names: 154248453

Gene position: 5011083-5010382 (Counterclockwise)

Preceding gene: 154248454

Following gene: 154248450

Centisome position: 94.39

GC content: 68.95

Gene sequence:

>702_bases
ATGCGCATGCTGTCGCGATTGCCGCCGGCTTTTGTCGGCGCCGGAGGTGCCATGTCCCAGTCTGCGTCCCAACCTGCGCC
GGAGCCGCCCGGGGAAAGCGGCGAGACGCACCTTGCGCCCCTCGATTTTTCCGGCGCCTGCCTCGTCGCCACGGCTGAGC
CGGCGCAGGGGCCTTTGGAACCCGCGCCCACCCCGGATGCCGCCGCCCTCGCGGACCTGCTGGTGGCGCATTCCTTCGGC
GACACCGCGGTGCTGCTGCCATCGGCCGTTACCGTGCGGCGGGTGATCCTCGACACCGTCCGTGCCCAGCACCGCGTCGC
CGGACGGCCCAAACGGCGAGAGTTGCTGGTCTGCGCCGGGGATGGGCCTTTGGCGCTGGAATTTGCCGGCGATGCGGAGG
TCAGCCGCATGCCTGATGAGATCGGCGCCATCCGCGCCGCCATAGGGCCGAAGACGGCCGGCCTGTTCGTCGCTCCGGTC
CGGCTTGCGGCGGGCATCGAGATGCTGCCGGGCTCCTTCCTCGCTGAACTGCGCGAGGCGGCGGACGAATATGGCCTCGC
CCTGATCTTCGACGAGACCGACGCGGGCCTCGGGCGTACCGGCATGGCCTTCGCCCATGAATGGACCGGCGTGACTGAAT
GCAGACACATCATCCTGCAGATCGTGGGATACCGTGGGACATGCGGGGATATATCGGGATGA

Upstream 100 bases:

>100_bases
GCCGCGTTCGGGCGGGGGAGACGAGGCAGAGACGGCTCGGCCGCAGGCTTGAAGTCGGATCGTGGTTCGCAGATGTGACC
GGTTAAGGCCGCGTTCTTGC

Downstream 100 bases:

>100_bases
GCCGTTGTCCTGCCTGGGTTAGCGGGGCGTCGCGGGCAAAATCGGCGGCGGCGCTTTTAGTCTTGCAGAAGGGGTCGTTC
CGGCGGCCAGGACAGTTGCT

Product: class III aminotransferase

Products: NA

Alternate protein names: ACOAT 1 [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRMLSRLPPAFVGAGGAMSQSASQPAPEPPGESGETHLAPLDFSGACLVATAEPAQGPLEPAPTPDAAALADLLVAHSFG
DTAVLLPSAVTVRRVILDTVRAQHRVAGRPKRRELLVCAGDGPLALEFAGDAEVSRMPDEIGAIRAAIGPKTAGLFVAPV
RLAAGIEMLPGSFLAELREAADEYGLALIFDETDAGLGRTGMAFAHEWTGVTECRHIILQIVGYRGTCGDISG

Sequences:

>Translated_233_residues
MRMLSRLPPAFVGAGGAMSQSASQPAPEPPGESGETHLAPLDFSGACLVATAEPAQGPLEPAPTPDAAALADLLVAHSFG
DTAVLLPSAVTVRRVILDTVRAQHRVAGRPKRRELLVCAGDGPLALEFAGDAEVSRMPDEIGAIRAAIGPKTAGLFVAPV
RLAAGIEMLPGSFLAELREAADEYGLALIFDETDAGLGRTGMAFAHEWTGVTECRHIILQIVGYRGTCGDISG
>Mature_233_residues
MRMLSRLPPAFVGAGGAMSQSASQPAPEPPGESGETHLAPLDFSGACLVATAEPAQGPLEPAPTPDAAALADLLVAHSFG
DTAVLLPSAVTVRRVILDTVRAQHRVAGRPKRRELLVCAGDGPLALEFAGDAEVSRMPDEIGAIRAAIGPKTAGLFVAPV
RLAAGIEMLPGSFLAELREAADEYGLALIFDETDAGLGRTGMAFAHEWTGVTECRHIILQIVGYRGTCGDISG

Specific function: Involved In Both The Arginine And Lysine Biosynthetic Pathways. [C]

COG id: COG4992

COG function: function code E; Ornithine/acetylornithine aminotransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004636
- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.11 [H]

Molecular weight: Translated: 24085; Mature: 24085

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMLSRLPPAFVGAGGAMSQSASQPAPEPPGESGETHLAPLDFSGACLVATAEPAQGPLE
CCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC
PAPTPDAAALADLLVAHSFGDTAVLLPSAVTVRRVILDTVRAQHRVAGRPKRRELLVCAG
CCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DGPLALEFAGDAEVSRMPDEIGAIRAAIGPKTAGLFVAPVRLAAGIEMLPGSFLAELREA
CCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHCCHHHHHHHHHH
ADEYGLALIFDETDAGLGRTGMAFAHEWTGVTECRHIILQIVGYRGTCGDISG
HHHCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRMLSRLPPAFVGAGGAMSQSASQPAPEPPGESGETHLAPLDFSGACLVATAEPAQGPLE
CCHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCC
PAPTPDAAALADLLVAHSFGDTAVLLPSAVTVRRVILDTVRAQHRVAGRPKRRELLVCAG
CCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DGPLALEFAGDAEVSRMPDEIGAIRAAIGPKTAGLFVAPVRLAAGIEMLPGSFLAELREA
CCCEEEEECCCCHHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHCCCHHCCHHHHHHHHHH
ADEYGLALIFDETDAGLGRTGMAFAHEWTGVTECRHIILQIVGYRGTCGDISG
HHHCCEEEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]