| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248421
Identifier: 154248421
GI number: 154248421
Start: 4990198
End: 4991916
Strand: Reverse
Name: 154248421
Synonym: Xaut_4501
Alternate gene names: NA
Gene position: 4991916-4990198 (Counterclockwise)
Preceding gene: 154248422
Following gene: 154248420
Centisome position: 94.03
GC content: 68.7
Gene sequence:
>1719_bases ATGGCCACCACCCTCAGCGCGCTGGACCTGCCCTTCGACGAGGCCATCGCCTTCCTGCGGCAGAAGGCGAATGTCACGTC GCGGGACTACACCGATGTCTGGGGCAAGGCCAACGTCAAGTCGTACACTGTTGCCGGTGCCAGCACTGAGGCCCTCGTTA ACGACTTCCGCGCCGAGACGGCGAAGGCGCTGGAGACGGGCACCTCGATCCAGGAGTTCCGCAAGACCTTCGACAAGATC GTCACCAAGCACGGCTGGGACCACACCGGCACGCCCGGCTTCCGCTCGCGGATCATCTTCGAGACCAACCTAGGCATGGC CTACAGCGCCGGCCGCTATGCCCAGCAGACCGAGACTGAGACCCTCGCCGCCTTCCCCTTCTGGCAGTACGTGCACTCCG GCGCGCTGCATCCGCGCAAGCAGCACCAGGCGTGGAACGGCCTGACCCTGCGCGCCGACGATCCGTTCTGGAAGACCCAC TACCCGCCCAATGGCTGGCGCTGCGGGTGCCGCACCCGTCCGGTCTCGGCCCGCGGGATGGCCCGCATGGGCAAGTCCGG GCCGGACACGGCGCCCCCCATCAAGCTCATCGAGCACACCATCCGCAAGACCGGCGAGGTGATCCGGGTGCCGGAGGGAA TCGATCCGGGGTTTGACTACAATGTCGGCCAGGAGTGGACCGGACAGGCACCGCAGATCCCGGCCAATGCCACCCTGACG GCCAAGACCGGCGCACCGCCTCCGGCCTCGCCCCCGCCGCCTCCGGCCGCTCCTGCCGCGCCGCCACCTCCACCAGCGTC CGATCCGGGGCCGGTGCTGGTGATGCCGCCTGTGCCGCCGGCGCCGGGCGTGCCGATCCCGCCGCCACCTCGGGGCGTCG TGCCGCGATCGCCGGCGCCCGCCCGACCCGCGCCCCCGGCCGGGCAGCCGATCCGGCCGAAACAGAAGGAGCTGGATCTC GGGCCGGTCCCGGCCCTTCCGGTGCGGCCGCGCGCTGCGAACGTGCGGATCACGCCCCGGATCGATCCGGAGCGCCCGGC CTGGCCGTGGAAGCCCCAGCCACGCCGCAAGCCGATACAGATGGAGATCAGCAACGCCGCGCTCGACCAGGCCGAGAAGC TGGGTATTTTCAGAAACCACCGCGAGGCCCGCCGGCTGGCCAACGAGCTGATGGCCGGCATACCGGACAGCCTGTCCGTC AAGGCCTCCTGGGAAGCCGGAGACAAGGCGGTGCGGCTTGTCGTCGACCACGCCGAGGTCCGGCTGGAGCGGACATTCTG GCGCGATGCCGACGGGCTGGTCGTTGACCATGACCTGTTCTGGATGCTGCAAAAGCATCAGGGCAAGGGGGGCGCGAAGC GGATGCTCAGGACGAGCTTCGCAGCCTACGACCGGATTGGCGTGGCCAAGGTCCAGGTCCACGCCAATATCGACGTCGGG GGCTATACGTGGGCCCGCTCCGGCTTCCGGGTCGAAGACGCCGAGGACATGCGGGATCTGCTCCGCGACGCCGCCAGCAC CTACAGTCCCACGATGCGTCTCGAGCTGCTGCGTGTCGTCGAGTCGTCTTCCGACACCGAGTTGATGTATAACGTCGCGA CGGTCACCGATGCGGGTGGCCCGTTTGGAAAACAAGTGCTGCTGGGATCTGACTGGTTCGGCGTGGCCGACCTGGTTGAT CCGGTGCACCGGGATTTGCTGGCCAGGGCGCTCCGATGA
Upstream 100 bases:
>100_bases AAGCATTCGCCGAGGCAATGACGCGTGGCATGGCGCTGGCCCACCTGGTGGGGCAGGCCGCCCTGGTGGATGAGCTGCGC CTCGAGGTCTGACCGGCGCC
Downstream 100 bases:
>100_bases CCAAGGTTGTCTACGATTTCATCGATCGCCCGGAGGGGCCTGTGATCGACGGCAGCGAGGAATTTCTGAATCCGGAGGAT CGGGTGACCCCGGCCGACCT
Product: putative head morphogenesis protein SPP1 gp7
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MATTLSALDLPFDEAIAFLRQKANVTSRDYTDVWGKANVKSYTVAGASTEALVNDFRAETAKALETGTSIQEFRKTFDKI VTKHGWDHTGTPGFRSRIIFETNLGMAYSAGRYAQQTETETLAAFPFWQYVHSGALHPRKQHQAWNGLTLRADDPFWKTH YPPNGWRCGCRTRPVSARGMARMGKSGPDTAPPIKLIEHTIRKTGEVIRVPEGIDPGFDYNVGQEWTGQAPQIPANATLT AKTGAPPPASPPPPPAAPAAPPPPPASDPGPVLVMPPVPPAPGVPIPPPPRGVVPRSPAPARPAPPAGQPIRPKQKELDL GPVPALPVRPRAANVRITPRIDPERPAWPWKPQPRRKPIQMEISNAALDQAEKLGIFRNHREARRLANELMAGIPDSLSV KASWEAGDKAVRLVVDHAEVRLERTFWRDADGLVVDHDLFWMLQKHQGKGGAKRMLRTSFAAYDRIGVAKVQVHANIDVG GYTWARSGFRVEDAEDMRDLLRDAASTYSPTMRLELLRVVESSSDTELMYNVATVTDAGGPFGKQVLLGSDWFGVADLVD PVHRDLLARALR
Sequences:
>Translated_572_residues MATTLSALDLPFDEAIAFLRQKANVTSRDYTDVWGKANVKSYTVAGASTEALVNDFRAETAKALETGTSIQEFRKTFDKI VTKHGWDHTGTPGFRSRIIFETNLGMAYSAGRYAQQTETETLAAFPFWQYVHSGALHPRKQHQAWNGLTLRADDPFWKTH YPPNGWRCGCRTRPVSARGMARMGKSGPDTAPPIKLIEHTIRKTGEVIRVPEGIDPGFDYNVGQEWTGQAPQIPANATLT AKTGAPPPASPPPPPAAPAAPPPPPASDPGPVLVMPPVPPAPGVPIPPPPRGVVPRSPAPARPAPPAGQPIRPKQKELDL GPVPALPVRPRAANVRITPRIDPERPAWPWKPQPRRKPIQMEISNAALDQAEKLGIFRNHREARRLANELMAGIPDSLSV KASWEAGDKAVRLVVDHAEVRLERTFWRDADGLVVDHDLFWMLQKHQGKGGAKRMLRTSFAAYDRIGVAKVQVHANIDVG GYTWARSGFRVEDAEDMRDLLRDAASTYSPTMRLELLRVVESSSDTELMYNVATVTDAGGPFGKQVLLGSDWFGVADLVD PVHRDLLARALR >Mature_571_residues ATTLSALDLPFDEAIAFLRQKANVTSRDYTDVWGKANVKSYTVAGASTEALVNDFRAETAKALETGTSIQEFRKTFDKIV TKHGWDHTGTPGFRSRIIFETNLGMAYSAGRYAQQTETETLAAFPFWQYVHSGALHPRKQHQAWNGLTLRADDPFWKTHY PPNGWRCGCRTRPVSARGMARMGKSGPDTAPPIKLIEHTIRKTGEVIRVPEGIDPGFDYNVGQEWTGQAPQIPANATLTA KTGAPPPASPPPPPAAPAAPPPPPASDPGPVLVMPPVPPAPGVPIPPPPRGVVPRSPAPARPAPPAGQPIRPKQKELDLG PVPALPVRPRAANVRITPRIDPERPAWPWKPQPRRKPIQMEISNAALDQAEKLGIFRNHREARRLANELMAGIPDSLSVK ASWEAGDKAVRLVVDHAEVRLERTFWRDADGLVVDHDLFWMLQKHQGKGGAKRMLRTSFAAYDRIGVAKVQVHANIDVGG YTWARSGFRVEDAEDMRDLLRDAASTYSPTMRLELLRVVESSSDTELMYNVATVTDAGGPFGKQVLLGSDWFGVADLVDP VHRDLLARALR
Specific function: Involved in virion morphogenesis [H]
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein F [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006528 [H]
Pfam domain/function: PF04233 Phage_Mu_F [H]
EC number: NA
Molecular weight: Translated: 62725; Mature: 62594
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLSALDLPFDEAIAFLRQKANVTSRDYTDVWGKANVKSYTVAGASTEALVNDFRAET CCCCCCHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHH AKALETGTSIQEFRKTFDKIVTKHGWDHTGTPGFRSRIIFETNLGMAYSAGRYAQQTETE HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEECCCCEECCCCHHHHHCCH TLAAFPFWQYVHSGALHPRKQHQAWNGLTLRADDPFWKTHYPPNGWRCGCRTRPVSARGM HHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARMGKSGPDTAPPIKLIEHTIRKTGEVIRVPEGIDPGFDYNVGQEWTGQAPQIPANATLT HHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE AKTGAPPPASPPPPPAAPAAPPPPPASDPGPVLVMPPVPPAPGVPIPPPPRGVVPRSPAP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC ARPAPPAGQPIRPKQKELDLGPVPALPVRPRAANVRITPRIDPERPAWPWKPQPRRKPIQ CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEE MEISNAALDQAEKLGIFRNHREARRLANELMAGIPDSLSVKASWEAGDKAVRLVVDHAEV EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEHHHH RLERTFWRDADGLVVDHDLFWMLQKHQGKGGAKRMLRTSFAAYDRIGVAKVQVHANIDVG HHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECC GYTWARSGFRVEDAEDMRDLLRDAASTYSPTMRLELLRVVESSSDTELMYNVATVTDAGG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCC PFGKQVLLGSDWFGVADLVDPVHRDLLARALR CCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATTLSALDLPFDEAIAFLRQKANVTSRDYTDVWGKANVKSYTVAGASTEALVNDFRAET CCCCCHHCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHH AKALETGTSIQEFRKTFDKIVTKHGWDHTGTPGFRSRIIFETNLGMAYSAGRYAQQTETE HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEEECCCCEECCCCHHHHHCCH TLAAFPFWQYVHSGALHPRKQHQAWNGLTLRADDPFWKTHYPPNGWRCGCRTRPVSARGM HHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARMGKSGPDTAPPIKLIEHTIRKTGEVIRVPEGIDPGFDYNVGQEWTGQAPQIPANATLT HHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE AKTGAPPPASPPPPPAAPAAPPPPPASDPGPVLVMPPVPPAPGVPIPPPPRGVVPRSPAP ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC ARPAPPAGQPIRPKQKELDLGPVPALPVRPRAANVRITPRIDPERPAWPWKPQPRRKPIQ CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEE MEISNAALDQAEKLGIFRNHREARRLANELMAGIPDSLSVKASWEAGDKAVRLVVDHAEV EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEHHHH RLERTFWRDADGLVVDHDLFWMLQKHQGKGGAKRMLRTSFAAYDRIGVAKVQVHANIDVG HHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECC GYTWARSGFRVEDAEDMRDLLRDAASTYSPTMRLELLRVVESSSDTELMYNVATVTDAGG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCC PFGKQVLLGSDWFGVADLVDPVHRDLLARALR CCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]