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The map label for this gene is ymfP [C]

Identifier: 154248402

GI number: 154248402

Start: 4975058

End: 4976158

Strand: Reverse

Name: ymfP [C]

Synonym: Xaut_4482

Alternate gene names: 154248402

Gene position: 4976158-4975058 (Counterclockwise)

Preceding gene: 154248403

Following gene: 154248401

Centisome position: 93.73

GC content: 71.12

Gene sequence:

>1101_bases
ATGCCTTTCCCCCTCAAGACACCGGCCGATCTGACCCGGCGCGCGGAAGCCTTGATGGAGGCGGCGCTGCGCAAGGCCCG
TCCCAATGTCGATCCGGCTGCGATCTCCCGGTCCGTGCGCTCGCCGCGGGGCATGATCGCGGCGACCATCCGCGTCATGG
TCATGCTCGTCTACGAGCTGCACCTGCATCTGCGCTGGTGGGGCGATCAGCTCTTTCCCGACACCGCCGAGGCCGAGTAC
CTGGTGCGTCATGCCTCGATCTGGGGCGTGACCCGCAGGCCCGCAACGCGGGCCATCGGATACGCGACTGTCGCCGGCGC
CAACGGCACTGCCGTGCCCATTGATGCGGTCCTCGTGGGCGCGGGCGGCCTGCTCTACACGGTGACCGCAGGCGCCACCA
TCGTAGCCGGCACCGCCACCATCACGGTCCGCGCGCTCGATGCGGGCGCCGATGGCAATGCGGCGGCCGACACAAGGCTG
TCCTTCCAGACCGACATCGACGGGCTCAATCCGCAGGAGGCCGTGGTCGATGCGGACGGGCTCACCGGCGGCGCGGCCAT
CGAGAGCCTCGCGTCGCTGCTGGCCCGGTTGCTCGCCGAGATCCGCGAGCCGGCCCATGGCGGCGCCAAGAGCGACTATC
CCAAGTGGGTTCAAAACACCTTCGCTGCGGCGCGGGTGCGTACCCTGCCCAACTGGGTCGGCGAGGGCACGGTCGGGGTG
TGCGTGGCCATGGGCACCGCCGCCCTGCCGCGCGTTCCGACGCCGGCGGAGCTGGAAGCCATGGCGGCGCACCTCGAAGG
TCTCCGCCCGGTGACCGCTGAGGTGATCATGGTTGCCGTCGAGCTGCTCGCGGTGCCCATCACCCTCGCGGTCGATCCCG
ACGAGGCGCGGGTGCGGCAGGCGGTCAACGCGGCGATCCTGACCCATTTCGCGGCCGACGCGGACATTGGCGCGCGGCTC
TATCGCTCGCGCCTGTCGGAGGCGATCTCCGCCGCCTCGGGCGAGTACCGCCATGAGCTGTCGGTGCCGGCCGCCGACGT
AGTGCCCACCGACATCCAGCTGCCGGTGCCCGGCGCGCTCACCTGGGCGGCGCTGCCATGA

Upstream 100 bases:

>100_bases
CCGGCGGACATCACCGTCGAGTGGGTGCGCACCAGTGTGCTCGGCCTGCGGGTGGTGGTGGACGGCCGCGAGGCCGCGTT
CGCAGTGCGGGCTGCCTGAC

Downstream 100 bases:

>100_bases
GCCGCTCGGCCGAGACCATCCAGCGCGAGGGGTTGTCCCTGTACTGGCCGAGCGACGTGATCGCTCCGGTGCCGGGCGGC
GTGATCGCCGCCGTGGTGGA

Product: baseplate J family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MPFPLKTPADLTRRAEALMEAALRKARPNVDPAAISRSVRSPRGMIAATIRVMVMLVYELHLHLRWWGDQLFPDTAEAEY
LVRHASIWGVTRRPATRAIGYATVAGANGTAVPIDAVLVGAGGLLYTVTAGATIVAGTATITVRALDAGADGNAAADTRL
SFQTDIDGLNPQEAVVDADGLTGGAAIESLASLLARLLAEIREPAHGGAKSDYPKWVQNTFAAARVRTLPNWVGEGTVGV
CVAMGTAALPRVPTPAELEAMAAHLEGLRPVTAEVIMVAVELLAVPITLAVDPDEARVRQAVNAAILTHFAADADIGARL
YRSRLSEAISAASGEYRHELSVPAADVVPTDIQLPVPGALTWAALP

Sequences:

>Translated_366_residues
MPFPLKTPADLTRRAEALMEAALRKARPNVDPAAISRSVRSPRGMIAATIRVMVMLVYELHLHLRWWGDQLFPDTAEAEY
LVRHASIWGVTRRPATRAIGYATVAGANGTAVPIDAVLVGAGGLLYTVTAGATIVAGTATITVRALDAGADGNAAADTRL
SFQTDIDGLNPQEAVVDADGLTGGAAIESLASLLARLLAEIREPAHGGAKSDYPKWVQNTFAAARVRTLPNWVGEGTVGV
CVAMGTAALPRVPTPAELEAMAAHLEGLRPVTAEVIMVAVELLAVPITLAVDPDEARVRQAVNAAILTHFAADADIGARL
YRSRLSEAISAASGEYRHELSVPAADVVPTDIQLPVPGALTWAALP
>Mature_365_residues
PFPLKTPADLTRRAEALMEAALRKARPNVDPAAISRSVRSPRGMIAATIRVMVMLVYELHLHLRWWGDQLFPDTAEAEYL
VRHASIWGVTRRPATRAIGYATVAGANGTAVPIDAVLVGAGGLLYTVTAGATIVAGTATITVRALDAGADGNAAADTRLS
FQTDIDGLNPQEAVVDADGLTGGAAIESLASLLARLLAEIREPAHGGAKSDYPKWVQNTFAAARVRTLPNWVGEGTVGVC
VAMGTAALPRVPTPAELEAMAAHLEGLRPVTAEVIMVAVELLAVPITLAVDPDEARVRQAVNAAILTHFAADADIGARLY
RSRLSEAISAASGEYRHELSVPAADVVPTDIQLPVPGALTWAALP

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 38352; Mature: 38221

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPLKTPADLTRRAEALMEAALRKARPNVDPAAISRSVRSPRGMIAATIRVMVMLVYEL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
HLHLRWWGDQLFPDTAEAEYLVRHASIWGVTRRPATRAIGYATVAGANGTAVPIDAVLVG
HHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCHHHHEEC
AGGLLYTVTAGATIVAGTATITVRALDAGADGNAAADTRLSFQTDIDGLNPQEAVVDADG
CCCEEEEEECCCEEEECCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHEEECCC
LTGGAAIESLASLLARLLAEIREPAHGGAKSDYPKWVQNTFAAARVRTLPNWVGEGTVGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
CVAMGTAALPRVPTPAELEAMAAHLEGLRPVTAEVIMVAVELLAVPITLAVDPDEARVRQ
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHH
AVNAAILTHFAADADIGARLYRSRLSEAISAASGEYRHELSVPAADVVPTDIQLPVPGAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHCCCCCEECCCCCCC
TWAALP
CCCCCC
>Mature Secondary Structure 
PFPLKTPADLTRRAEALMEAALRKARPNVDPAAISRSVRSPRGMIAATIRVMVMLVYEL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
HLHLRWWGDQLFPDTAEAEYLVRHASIWGVTRRPATRAIGYATVAGANGTAVPIDAVLVG
HHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCHHHHEEC
AGGLLYTVTAGATIVAGTATITVRALDAGADGNAAADTRLSFQTDIDGLNPQEAVVDADG
CCCEEEEEECCCEEEECCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHEEECCC
LTGGAAIESLASLLARLLAEIREPAHGGAKSDYPKWVQNTFAAARVRTLPNWVGEGTVGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
CVAMGTAALPRVPTPAELEAMAAHLEGLRPVTAEVIMVAVELLAVPITLAVDPDEARVRQ
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCHHHHHH
AVNAAILTHFAADADIGARLYRSRLSEAISAASGEYRHELSVPAADVVPTDIQLPVPGAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHCCCCCEECCCCCCC
TWAALP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]