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The map label for this gene is sufB [C]

Identifier: 154248389

GI number: 154248389

Start: 4959937

End: 4961409

Strand: Reverse

Name: sufB [C]

Synonym: Xaut_4469

Alternate gene names: 154248389

Gene position: 4961409-4959937 (Counterclockwise)

Preceding gene: 154248390

Following gene: 154248388

Centisome position: 93.45

GC content: 63.07

Gene sequence:

>1473_bases
ATGCCTGCGGTTCAGGAAACGGTTGAACGCGTCCGCGCGCTCGACGTGGACCAGTACAAGTACGGTTTCGTCACGGACAT
CGAGAGCGAGAAGGCTCCCAAGGGCCTGTCCGAGGACACGATCCGCTATATCTCCGCCAAGAAGAACGAGCCCGAATGGA
TGCTCGAATGGCGGCTGGAAGCCTACCGGCGCTGGCTCACCATGGTGGAGCCCACCTGGGCGCGGGTGAGCTATCCGCAG
ATCGATTTCCAGGACTATTATTATTATTCCGCGCCCAAGGCGGCGCCGAAGTCCATCGACGAGATCGATCCGGAAATCCT
CAAGACCTACGAGAAGCTGGGCATTCCGCTGCGCGAGCGCGACGCCCTGCTGGGCATCGAGAGTTCCGGCGGCTCGAAGG
TGGCGGTGGACGCGGTGTTCGACAGCGTGTCAGTGGCCACCACCTTCAAGGCGGAGCTGGCCAGCGCAGGCGTGATCTTC
ATGCCCATCTCGGAAGCCATCCGCGAGCATCCCGAGCTGGTGAAGACCTATCTCGGCTCGGTGGTGCCGGTGTCGGACAA
TTTCTACGCCACGCTGAATTCGGCGGTCTTTTCCGACGGGTCGTTCGTGTACATCCCCAAGGGGGTGCGCTGCCCCATGG
AATTGTCCACCTACTTCCGCATCAACGAGCGCAACACCGGCCAGTTCGAGCGCACCCTCATCATCGCCGACGAGGGAGCC
TATGTGAGCTATCTGGAAGGCTGCACCGCGCCCCAGCGTGACGAGAACCAGCTGCATGCCGCCGTGGTGGAGCTGGTGGC
GCTGAAGGGCGCCGAGATCAAGTATTCCACCGTCCAGAACTGGTATCCCGGCGACAAGGACGGCAAGGGCGGCATCTATA
ATTTCGTCACCAAGCGCGGCGACTGCCGGGGCGACAATTCCAAGATCTCGTGGACCCAGGTGGAGACCGGATCGGCCATC
ACCTGGAAGTATCCGAGCTGCATCCTGAGGGGCGACAACTCGCAGGGCGAGTTCTATTCCATCGCCATCTCCAACGGCCA
CCAGCAGGTGGATAGCGGCACCAAGATGATCCATCTCGGCAAGAACACGTCGAGCCGCATCATCTCCAAGGGCATCGCCG
CCGGCCATTCCGAGAACACCTATCGCGGGCAGGTCTCGGCCCACCGCAAGGCGACCGGCGCGCGCAACTTCACCAATTGC
GACTCGCTGCTCATCGGCGACCAGTGCGGCGCGCACACCGTGCCCTACATGGAGGCCAAGAACGCCTCGGCCCAGTTCGA
GCACGAGGCCACCACCTCCAAGATCTCCGAGGACCAGCTGTTCTACTGCCTCCAGCGCGGCCTCGGCCCGGAGGAGGCGG
TGGCGCTGATCGTCAACGGCTTCGTGCGCGACGTGCTCCAGCAGCTGCCCATGGAGTTCGCCGTGGAGGCCCAGAAGCTC
ATCGCCGTGAGCCTCGAGGGAAGCGTGGGGTGA

Upstream 100 bases:

>100_bases
GGGGCGGAAATTCAGGACCCGCGCGTCATGCGCGGCATGAGACGTAAGACGTGAACTTGACCCGCGGGCCTTGACCCCGC
GCGGGAGAGGAGAAGAGAAG

Downstream 100 bases:

>100_bases
GCATTTGGCCCTTGTAACGATGCGTCATGGCCGGGCTTTTCCCGGCCATCCACGCCCGGCGACCGGGAACAGGCTTCCCT
CCAGTGCGCCAGCGGCACGG

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MPAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLEAYRRWLTMVEPTWARVSYPQ
IDFQDYYYYSAPKAAPKSIDEIDPEILKTYEKLGIPLRERDALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIF
MPISEAIREHPELVKTYLGSVVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGA
YVSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAI
TWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNC
DSLLIGDQCGAHTVPYMEAKNASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQKL
IAVSLEGSVG

Sequences:

>Translated_490_residues
MPAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLEAYRRWLTMVEPTWARVSYPQ
IDFQDYYYYSAPKAAPKSIDEIDPEILKTYEKLGIPLRERDALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIF
MPISEAIREHPELVKTYLGSVVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGA
YVSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAI
TWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNC
DSLLIGDQCGAHTVPYMEAKNASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQKL
IAVSLEGSVG
>Mature_489_residues
PAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLEAYRRWLTMVEPTWARVSYPQI
DFQDYYYYSAPKAAPKSIDEIDPEILKTYEKLGIPLRERDALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIFM
PISEAIREHPELVKTYLGSVVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGAY
VSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRGDCRGDNSKISWTQVETGSAIT
WKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLGKNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNCD
SLLIGDQCGAHTVPYMEAKNASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQKLI
AVSLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=488, Percent_Identity=61.8852459016393, Blast_Score=648, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54353; Mature: 54221

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLE
CCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AYRRWLTMVEPTWARVSYPQIDFQDYYYYSAPKAAPKSIDEIDPEILKTYEKLGIPLRER
HHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCCCC
DALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIFMPISEAIREHPELVKTYLGS
CCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHCC
VVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGA
EEEECCCCEEEECHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCC
YVSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG
CHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHCCC
DCRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLG
CCCCCCCEEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECCCCHHHCCCCEEEEEC
KNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNCDSLLIGDQCGAHTVPYMEAK
CCCHHHHHHHHHCCCCCCCCEECCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEECC
NASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQKL
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEE
IAVSLEGSVG
EEEEECCCCC
>Mature Secondary Structure 
PAVQETVERVRALDVDQYKYGFVTDIESEKAPKGLSEDTIRYISAKKNEPEWMLEWRLE
CCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
AYRRWLTMVEPTWARVSYPQIDFQDYYYYSAPKAAPKSIDEIDPEILKTYEKLGIPLRER
HHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCCCC
DALLGIESSGGSKVAVDAVFDSVSVATTFKAELASAGVIFMPISEAIREHPELVKTYLGS
CCEEEEECCCCCEEEEEEHHCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHCC
VVPVSDNFYATLNSAVFSDGSFVYIPKGVRCPMELSTYFRINERNTGQFERTLIIADEGA
EEEECCCCEEEECHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCC
YVSYLEGCTAPQRDENQLHAAVVELVALKGAEIKYSTVQNWYPGDKDGKGGIYNFVTKRG
CHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHHCCC
DCRGDNSKISWTQVETGSAITWKYPSCILRGDNSQGEFYSIAISNGHQQVDSGTKMIHLG
CCCCCCCEEEEEEEECCCEEEEECCEEEEECCCCCCCEEEEEECCCCHHHCCCCEEEEEC
KNTSSRIISKGIAAGHSENTYRGQVSAHRKATGARNFTNCDSLLIGDQCGAHTVPYMEAK
CCCHHHHHHHHHCCCCCCCCEECCCHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEECC
NASAQFEHEATTSKISEDQLFYCLQRGLGPEEAVALIVNGFVRDVLQQLPMEFAVEAQKL
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEE
IAVSLEGSVG
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]