| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is trpE [H]
Identifier: 154248298
GI number: 154248298
Start: 4853425
End: 4854936
Strand: Reverse
Name: trpE [H]
Synonym: Xaut_4378
Alternate gene names: 154248298
Gene position: 4854936-4853425 (Counterclockwise)
Preceding gene: 154248299
Following gene: 154248297
Centisome position: 91.45
GC content: 68.52
Gene sequence:
>1512_bases GTGAACGCACCCACCGATTTCGACCTCTTCACCTCGCGCTACCTGAAGGGCGAGGCGCAGGTGGTTTCCACCACCCTGGT GGCCGACCTGGAAACCCCGGTCTCGGCCTTCCTGAAGCTCGCCGGGGACACCCCCAACGCCTTCCTCCTCGAATCGGTGG AAGGCGGGCAGACCCGCGGTCGCTATTCCATGATCGGGCTCGCGCCCGACCTTATCTTCCGCGCGTCCGGCGATACGGCG GAGATCAACCGCACCCCGGCGGCGGACAAGGACGCCTTCGTCCCCTGCTCCGAGCCGCCGCTGAAGGCGCTGCGGACCCT GCTCGCCGAATCGGCCATCGACCTGCCGGCCGGTGCCCCGCCCATGGCGGCGGGCGTATTCGGCTATCTCGGCTACGACA TGGTACGGCAGATGGAGAAGCTGGCCCCCGCCAAGCCGGACCCCATCGGCGTGCCCGAGGCGCTGCTCATCCGCCCCACC CTCATGGTGGTGTTCGACGCGGTGAAGGACGAGCTGACCGCCGTCACCCCGGTGCGCCCGAAGGAGGGTGTCTCCCCCCG CGCGGCCTATGAGGCGGCGCTGGAGCGGCTCGACCAGGTGGTGGCGGGGCTGGAGCGAGCTATCGCCCATCCGGCGCCTG AGCCCTTCCACGGCGAGGTTCTGCCGGTCTCCAACACCAGTGCGGACGAGTTCTGCGCCATGGTGGACAAGGCAAAGGAC TATATCCGCGCCGGCGACATCTTCCAGGTGGTGCTGTCCCAGCGCTTCGAGAGCCCGTTCACCCTGCCGCCCTTCGCCCT CTACCGGGCTCTGCGGCGCGTGAACCCGGCGCCGTTCCTGGTCTATCTCAACTTCGACGGCTTCTCCGTGGTGTGCTCCT CGCCCGAGATCCTGGTGCGGCTGCGCGGCGGGCAGGTGACCATCCGTCCCATCGCCGGCACCCGCAAGCGCGGCGCCAGC CATGTGGAGGATGACGCGCTGGCCGCCGAGCTTCTGGCCGATCCCAAGGAGCGCGCCGAGCATCTCATGCTGCTGGACCT CGGCCGAAACGATGCCGGGCGAGTGTCGCAGATCGGCACGGTGAAGGTGACCGACAGCTTCTTCATCGAGCGCTACAGTC AGGTGATGCACATCGTCTCCAACGTGGAGGGCACGCTGGACCCGCGCTTCGACGCGGTGGATGCGCTGGCCGCCGGCTTT CCCGCCGGCACCGTCTCCGGCTCGCCCAAGGTGCGGGCGATGGAGATCATCGACGAGCTGGAGAAGGACAAGCGCGGCAT CTATGCCGGCGCCATCGGCTATTTCGGCGCCAATGGCGAGATGGACACCTGCATCGTCCTGCGCACCGCCGTGGTGAAGG ATGGCCGCATGTATGTGCAGGCCGGCGCCGGCATCGTCTACGACAGCGTGCCCGAGAGCGAGCAGCAGGAATGCGTGAAC AAGGCCAAGGCCCTGTTCCGCGCCGGGGAAGAGGCGGTGCGCTTCGCCGCCCGCGCCGGCAAGGGGCAGTGA
Upstream 100 bases:
>100_bases ATCTTTCCGCCATCCAGAAGGAGATCGGCGTGAAGATCAACGACAAGCTCTTCGCCCAGGCCACGGGCGCTGGCGCGACC AACTGAAGGTGGGCCACAGC
Downstream 100 bases:
>100_bases AGGCGATGGGTGCGCGCCACGCCGATGCACCGCTGGTTCGGATCAGGCACGCGGGCATGGCCGGCGTCGTGGCGGCCCGA TGGCGTGGGTCGCCCCGCAC
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MNAPTDFDLFTSRYLKGEAQVVSTTLVADLETPVSAFLKLAGDTPNAFLLESVEGGQTRGRYSMIGLAPDLIFRASGDTA EINRTPAADKDAFVPCSEPPLKALRTLLAESAIDLPAGAPPMAAGVFGYLGYDMVRQMEKLAPAKPDPIGVPEALLIRPT LMVVFDAVKDELTAVTPVRPKEGVSPRAAYEAALERLDQVVAGLERAIAHPAPEPFHGEVLPVSNTSADEFCAMVDKAKD YIRAGDIFQVVLSQRFESPFTLPPFALYRALRRVNPAPFLVYLNFDGFSVVCSSPEILVRLRGGQVTIRPIAGTRKRGAS HVEDDALAAELLADPKERAEHLMLLDLGRNDAGRVSQIGTVKVTDSFFIERYSQVMHIVSNVEGTLDPRFDAVDALAAGF PAGTVSGSPKVRAMEIIDELEKDKRGIYAGAIGYFGANGEMDTCIVLRTAVVKDGRMYVQAGAGIVYDSVPESEQQECVN KAKALFRAGEEAVRFAARAGKGQ
Sequences:
>Translated_503_residues MNAPTDFDLFTSRYLKGEAQVVSTTLVADLETPVSAFLKLAGDTPNAFLLESVEGGQTRGRYSMIGLAPDLIFRASGDTA EINRTPAADKDAFVPCSEPPLKALRTLLAESAIDLPAGAPPMAAGVFGYLGYDMVRQMEKLAPAKPDPIGVPEALLIRPT LMVVFDAVKDELTAVTPVRPKEGVSPRAAYEAALERLDQVVAGLERAIAHPAPEPFHGEVLPVSNTSADEFCAMVDKAKD YIRAGDIFQVVLSQRFESPFTLPPFALYRALRRVNPAPFLVYLNFDGFSVVCSSPEILVRLRGGQVTIRPIAGTRKRGAS HVEDDALAAELLADPKERAEHLMLLDLGRNDAGRVSQIGTVKVTDSFFIERYSQVMHIVSNVEGTLDPRFDAVDALAAGF PAGTVSGSPKVRAMEIIDELEKDKRGIYAGAIGYFGANGEMDTCIVLRTAVVKDGRMYVQAGAGIVYDSVPESEQQECVN KAKALFRAGEEAVRFAARAGKGQ >Mature_503_residues MNAPTDFDLFTSRYLKGEAQVVSTTLVADLETPVSAFLKLAGDTPNAFLLESVEGGQTRGRYSMIGLAPDLIFRASGDTA EINRTPAADKDAFVPCSEPPLKALRTLLAESAIDLPAGAPPMAAGVFGYLGYDMVRQMEKLAPAKPDPIGVPEALLIRPT LMVVFDAVKDELTAVTPVRPKEGVSPRAAYEAALERLDQVVAGLERAIAHPAPEPFHGEVLPVSNTSADEFCAMVDKAKD YIRAGDIFQVVLSQRFESPFTLPPFALYRALRRVNPAPFLVYLNFDGFSVVCSSPEILVRLRGGQVTIRPIAGTRKRGAS HVEDDALAAELLADPKERAEHLMLLDLGRNDAGRVSQIGTVKVTDSFFIERYSQVMHIVSNVEGTLDPRFDAVDALAAGF PAGTVSGSPKVRAMEIIDELEKDKRGIYAGAIGYFGANGEMDTCIVLRTAVVKDGRMYVQAGAGIVYDSVPESEQQECVN KAKALFRAGEEAVRFAARAGKGQ
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=504, Percent_Identity=35.3174603174603, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1788114, Length=448, Percent_Identity=30.3571428571429, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI87082077, Length=260, Percent_Identity=29.6153846153846, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786809, Length=204, Percent_Identity=26.9607843137255, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=463, Percent_Identity=40.1727861771058, Blast_Score=292, Evalue=7e-80, Organism=Saccharomyces cerevisiae, GI6324361, Length=398, Percent_Identity=24.6231155778894, Blast_Score=112, Evalue=2e-25,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54163; Mature: 54163
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPTDFDLFTSRYLKGEAQVVSTTLVADLETPVSAFLKLAGDTPNAFLLESVEGGQTRG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC RYSMIGLAPDLIFRASGDTAEINRTPAADKDAFVPCSEPPLKALRTLLAESAIDLPAGAP CEEEEECCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PMAAGVFGYLGYDMVRQMEKLAPAKPDPIGVPEALLIRPTLMVVFDAVKDELTAVTPVRP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KEGVSPRAAYEAALERLDQVVAGLERAIAHPAPEPFHGEVLPVSNTSADEFCAMVDKAKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH YIRAGDIFQVVLSQRFESPFTLPPFALYRALRRVNPAPFLVYLNFDGFSVVCSSPEILVR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEEE LRGGQVTIRPIAGTRKRGASHVEDDALAAELLADPKERAEHLMLLDLGRNDAGRVSQIGT ECCCEEEEEECCCCHHCCCCCCCHHHHHHHHHCCHHHHHCEEEEEECCCCCCCCHHCCCE VKVTDSFFIERYSQVMHIVSNVEGTLDPRFDAVDALAAGFPAGTVSGSPKVRAMEIIDEL EEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH EKDKRGIYAGAIGYFGANGEMDTCIVLRTAVVKDGRMYVQAGAGIVYDSVPESEQQECVN HHHCCCEEEEHHEEECCCCCCCHHHEEHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH KAKALFRAGEEAVRFAARAGKGQ HHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MNAPTDFDLFTSRYLKGEAQVVSTTLVADLETPVSAFLKLAGDTPNAFLLESVEGGQTRG CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC RYSMIGLAPDLIFRASGDTAEINRTPAADKDAFVPCSEPPLKALRTLLAESAIDLPAGAP CEEEEECCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC PMAAGVFGYLGYDMVRQMEKLAPAKPDPIGVPEALLIRPTLMVVFDAVKDELTAVTPVRP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KEGVSPRAAYEAALERLDQVVAGLERAIAHPAPEPFHGEVLPVSNTSADEFCAMVDKAKD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH YIRAGDIFQVVLSQRFESPFTLPPFALYRALRRVNPAPFLVYLNFDGFSVVCSSPEILVR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCEEEEE LRGGQVTIRPIAGTRKRGASHVEDDALAAELLADPKERAEHLMLLDLGRNDAGRVSQIGT ECCCEEEEEECCCCHHCCCCCCCHHHHHHHHHCCHHHHHCEEEEEECCCCCCCCHHCCCE VKVTDSFFIERYSQVMHIVSNVEGTLDPRFDAVDALAAGFPAGTVSGSPKVRAMEIIDEL EEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH EKDKRGIYAGAIGYFGANGEMDTCIVLRTAVVKDGRMYVQAGAGIVYDSVPESEQQECVN HHHCCCEEEEHHEEECCCCCCCHHHEEHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHH KAKALFRAGEEAVRFAARAGKGQ HHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA