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The map label for this gene is ydiK [C]

Identifier: 154248269

GI number: 154248269

Start: 4818523

End: 4819629

Strand: Direct

Name: ydiK [C]

Synonym: Xaut_4349

Alternate gene names: 154248269

Gene position: 4818523-4819629 (Clockwise)

Preceding gene: 154248267

Following gene: 154248271

Centisome position: 90.76

GC content: 67.84

Gene sequence:

>1107_bases
ATGGACGAGATGCGCGCGCGGCTGGAAAGCCCCGAGACCTTCGAACCCCTGCTGCGCCTTGCGCTGCGGTTCGGGACGCT
GGCGCTGCTGCTCATCTGGTGCTTCACCATCATGAAGCCGTTCCTCAACCCCATCCTGTGGGGCCTCATCATCGCCATTG
CGTCTCACCCGCTGTTCGTCCGGCTCCGGGCGGCGGTGCACGGCCGCACCGCCGTGGCGGCCACGCTCTACGTGCTTCTG
GCCCTCGCGCTGCTGGTGCTGCCGGCCTATCTCCTCGCTGATACGCTGATCGTGAGCCTCAAGCTTCTGGCCCACCACCT
CGCCGACGGAACCCTGCGGGTGCCGCCGCCGCCGGATTCGGTGCGCACCTGGATCCTGGTGGGCGACCCCATTCACCGCT
TCTGGCTGCTCTCCTCCACCAATCTCGACCAGGCTTTCGCCTCGATCACCCCGGAGCTGACCACCATGGGGCGCTCCATG
GTCTCGGGGGTGTCAGATGTGCTGGTCGGCTTCCTTGAATTCATCATCGCCATCTTCGTGGCGGCGGCATTCATGGCCAA
TGCGGCGAGCGGGCAGCGGATCGCCGGGGATGTCGCCATCCGGCTCGCGGGCGAAGGCGGGCGCAGCTATGCGGATCTCG
CGGTGCGCACCATCCGCAGCGTCACCAAGGGCATCATCGGCGTCGCCCTGATCCAGTCGCTGCTGGCGGGCCTGGGCTTC
CTGGCGGCGGATATCCCGGCGGCGGGATTGCTGGCGCTGTTGTGCCTGATCATCGCCATCGTGCAGCTGCCGCTGGTGCT
GGTGCTGCTGCCGGTGGTCATCTACGCCTTCACCATTCTCGATCCGGTGCCCGCCGTGGTGTTCGCGGTATGGTGCACGG
GCGTATCGCTGATCGAGCACGTGCTGCGGCCGCTGATGCTGGCGCGCGGGGTGGATGTGCCCATGCTGGTGGTGTTCATC
GGCGCCATCGGTGGGCTGCTCACCTCCGGCGTGCTCGGCCTGTTCGTCGGGCCGGTGGTGCTGGCGCTGGGCTACACGCT
GGTGCTGGCCTGGCTGCAGGCGGCGCCCCGTGGCGCGGGGACCGGCGTGGATATCAAAAGCCTTTGA

Upstream 100 bases:

>100_bases
CCAGCCCGATGCAATAGGCCTGCCAGAACAGGGCGATCGACGGCTTGACCCCCGCCTCCGCCGGGGCCACCACTGAGGCA
GGTCGGGAGGGGAGGGCGAG

Downstream 100 bases:

>100_bases
AGCCCCTCCCTTCGTCCGGGAACGGCGATCCGCCGGCGCGAGGGCCGCGCCGGCGGATATGCGTCGGTCAGTGGCCCACC
ACCGGCGCGATGACGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MDEMRARLESPETFEPLLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFVRLRAAVHGRTAVAATLYVLL
ALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDSVRTWILVGDPIHRFWLLSSTNLDQAFASITPELTTMGRSM
VSGVSDVLVGFLEFIIAIFVAAAFMANAASGQRIAGDVAIRLAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGF
LAADIPAAGLLALLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIEHVLRPLMLARGVDVPMLVVFI
GAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPRGAGTGVDIKSL

Sequences:

>Translated_368_residues
MDEMRARLESPETFEPLLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFVRLRAAVHGRTAVAATLYVLL
ALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDSVRTWILVGDPIHRFWLLSSTNLDQAFASITPELTTMGRSM
VSGVSDVLVGFLEFIIAIFVAAAFMANAASGQRIAGDVAIRLAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGF
LAADIPAAGLLALLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIEHVLRPLMLARGVDVPMLVVFI
GAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPRGAGTGVDIKSL
>Mature_368_residues
MDEMRARLESPETFEPLLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFVRLRAAVHGRTAVAATLYVLL
ALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDSVRTWILVGDPIHRFWLLSSTNLDQAFASITPELTTMGRSM
VSGVSDVLVGFLEFIIAIFVAAAFMANAASGQRIAGDVAIRLAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGF
LAADIPAAGLLALLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIEHVLRPLMLARGVDVPMLVVFI
GAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPRGAGTGVDIKSL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=338, Percent_Identity=28.698224852071, Blast_Score=131, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39001; Mature: 39001

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEMRARLESPETFEPLLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFV
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLRAAVHGRTAVAATLYVLLALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDS
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
VRTWILVGDPIHRFWLLSSTNLDQAFASITPELTTMGRSMVSGVSDVLVGFLEFIIAIFV
CEEEEEECCHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAFMANAASGQRIAGDVAIRLAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGF
HHHHHHHCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAADIPAAGLLALLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIEH
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRPLMLARGVDVPMLVVFIGAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPRGAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TGVDIKSL
CCCCCCCC
>Mature Secondary Structure
MDEMRARLESPETFEPLLRLALRFGTLALLLIWCFTIMKPFLNPILWGLIIAIASHPLFV
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RLRAAVHGRTAVAATLYVLLALALLVLPAYLLADTLIVSLKLLAHHLADGTLRVPPPPDS
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
VRTWILVGDPIHRFWLLSSTNLDQAFASITPELTTMGRSMVSGVSDVLVGFLEFIIAIFV
CEEEEEECCHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAFMANAASGQRIAGDVAIRLAGEGGRSYADLAVRTIRSVTKGIIGVALIQSLLAGLGF
HHHHHHHCCCCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAADIPAAGLLALLCLIIAIVQLPLVLVLLPVVIYAFTILDPVPAVVFAVWCTGVSLIEH
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRPLMLARGVDVPMLVVFIGAIGGLLTSGVLGLFVGPVVLALGYTLVLAWLQAAPRGAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TGVDIKSL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]