| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mdeA [H]
Identifier: 154248252
GI number: 154248252
Start: 4804180
End: 4805583
Strand: Direct
Name: mdeA [H]
Synonym: Xaut_4332
Alternate gene names: 154248252
Gene position: 4804180-4805583 (Clockwise)
Preceding gene: 154248251
Following gene: 154248253
Centisome position: 90.49
GC content: 67.24
Gene sequence:
>1404_bases ATGACCGACGAGACCAGCACGCCGCCGCACGAGCCGGGTTTTGCCACCCTCGCCATCCACGCGGGCGCGCAGCCGGACCC GACCACGGGCGCACGGGCAACCCCTATCTACCAGACCACGTCCTTCGTCTTCGACGACGTGGACCATGCCGCGGCACTGT TCGGCCTCCAGACCTTCGGCAACATCTATTCGCGCATCACCAACCCCACCAATGCGGTGCTGGAAGAGCGCGTGGCGGCG CTGGAAGGCGGCACGGCGGCGCTGGCGGTGGCCTCGGGTCACGCGGCGCAGCACTTGGTGTTCCACACGCTGCTGACGCC GGGGGATGAGTTCATCGCCTCCCGCAAGCTCTATGGCGGCTCCATCAACCAGTTCAACCACGCCTTCAAGAGCTTCGGCT GGAACGTGGTGTGGGCGGATCCGGACGACATCTCCTCCTTCGAGAAGGCGGTGACGCCGAAGACCAAGGCCATCTTCACC GAGAGCATCGCCAATCCCGGCGGCGTGGTCACCGACATCGCCGCCATCTCGGCGGTGGCGAAGAAGGCCGGCGTGCCGCT CATCGTCGACAACACGCTGGCGACGCCCTACCTGTGGCAGCCCATCAGGCACGGCGCGGACATCGTCATCCATTCGGCCA CCAAGTTTCTGGGCGGACACGGCAATTCCATCGGCGGCGTGATCGTGGACGCGGGCACATTCGACTGGTCCGCCACCGAT CGCTATCCGTTCCTCTCCAAGCCGCGGCCGGAATATTCCGGCATGGTGCTGCACGAGACCTTCGGCAATTTCGCCTTCGC CATCGCGGCCCGGGTGCTGGGCCTGCGCGATCTAAGCAGAGATTCCCCGTCTGGCCAACGAATGCGGCCTGCGCTGCTGG TTGCGGGCGTGGACGGCGGCATGGATGGCGTGGTCGAGCGCGTCGCTATCCTTGAAAGTCTGGTGGGCGAGATGGTGCGC CTTGAGGTCGCGCCAGACCGCTTCGATGTCGTTGAGCTCGGGCGCGTATTTCGGCAGCCATTCAACGGTGAGCCAGTGGG CGCGGGCGGCCAGGGCGGCGCGGGAGAGCTTGCTGGTGTGGATCGGTCCGTTGTCCTCGACCAGCACGACGGGCCTGGCG GCGCGGCCCGGCTTGGGGCCGTACGCCTCATCGAGTTGCTGGAGGTGGGCGACGAAATCGCTGCTGCGCTTGGTCGGGCT GGTCTGGACGATCAGCTCCCGGGTGGCATGGTTGAGCGAGCCGAGCATCGCCACATTCTTGGCCTGACCCGGCGCCGGCA CCCGCAGGTCGGCGCCGGACTTCGCCCAGGCACGGGCGAGGTAGGGATGGGTCAGCGCCTCGCTCTCGTCGCCATACAGC AGCACGATGTCGCCTGCCGCGGCCTGCTGCTGGCGCAGTCGTAG
Upstream 100 bases:
>100_bases GTGGACCTAAAATCTCATAACATCCGTCGATTTTCTGTATTAAATAAAAATCCACGCCGGGCTATCACGGATCGGCGTCA GCCACTGGGAGAATGCGCTT
Downstream 100 bases:
>100_bases GCGCAATCCGACCCGATCGATCTCGTCCGCCTTCTGGCGTCCCTTCAGCGTGTGCCGAGGCCGCCGCCAGCGGAACTTTT TTTTCGCAGCGCCTTGGACA
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTDETSTPPHEPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYSRITNPTNAVLEERVAA LEGGTAALAVASGHAAQHLVFHTLLTPGDEFIASRKLYGGSINQFNHAFKSFGWNVVWADPDDISSFEKAVTPKTKAIFT ESIANPGGVVTDIAAISAVAKKAGVPLIVDNTLATPYLWQPIRHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWSATD RYPFLSKPRPEYSGMVLHETFGNFAFAIAARVLGLRDLSRDSPSGQRMRPALLVAGVDGGMDGVVERVAILESLVGEMVR LEVAPDRFDVVELGRVFRQPFNGEPVGAGGQGGAGELAGVDRSVVLDQHDGPGGAARLGAVRLIELLEVGDEIAAALGRA GLDDQLPGGMVERAEHRHILGLTRRRHPQVGAGLRPGTGEVGMGQRLALVAIQQHDVACRGLLLAQS
Sequences:
>Translated_467_residues MTDETSTPPHEPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYSRITNPTNAVLEERVAA LEGGTAALAVASGHAAQHLVFHTLLTPGDEFIASRKLYGGSINQFNHAFKSFGWNVVWADPDDISSFEKAVTPKTKAIFT ESIANPGGVVTDIAAISAVAKKAGVPLIVDNTLATPYLWQPIRHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWSATD RYPFLSKPRPEYSGMVLHETFGNFAFAIAARVLGLRDLSRDSPSGQRMRPALLVAGVDGGMDGVVERVAILESLVGEMVR LEVAPDRFDVVELGRVFRQPFNGEPVGAGGQGGAGELAGVDRSVVLDQHDGPGGAARLGAVRLIELLEVGDEIAAALGRA GLDDQLPGGMVERAEHRHILGLTRRRHPQVGAGLRPGTGEVGMGQRLALVAIQQHDVACRGLLLAQS >Mature_466_residues TDETSTPPHEPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFGNIYSRITNPTNAVLEERVAAL EGGTAALAVASGHAAQHLVFHTLLTPGDEFIASRKLYGGSINQFNHAFKSFGWNVVWADPDDISSFEKAVTPKTKAIFTE SIANPGGVVTDIAAISAVAKKAGVPLIVDNTLATPYLWQPIRHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWSATDR YPFLSKPRPEYSGMVLHETFGNFAFAIAARVLGLRDLSRDSPSGQRMRPALLVAGVDGGMDGVVERVAILESLVGEMVRL EVAPDRFDVVELGRVFRQPFNGEPVGAGGQGGAGELAGVDRSVVLDQHDGPGGAARLGAVRLIELLEVGDEIAAALGRAG LDDQLPGGMVERAEHRHILGLTRRRHPQVGAGLRPGTGEVGMGQRLALVAIQQHDVACRGLLLAQS
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=222, Percent_Identity=38.7387387387387, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI299473759, Length=222, Percent_Identity=31.981981981982, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI25453487, Length=221, Percent_Identity=31.6742081447964, Blast_Score=89, Evalue=9e-18, Organism=Escherichia coli, GI1790375, Length=215, Percent_Identity=35.3488372093023, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1789383, Length=227, Percent_Identity=27.3127753303965, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560056, Length=219, Percent_Identity=37.4429223744292, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17538055, Length=228, Percent_Identity=36.4035087719298, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71980708, Length=220, Percent_Identity=34.5454545454545, Blast_Score=127, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323333, Length=293, Percent_Identity=47.098976109215, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6319307, Length=236, Percent_Identity=33.0508474576271, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321170, Length=206, Percent_Identity=31.0679611650485, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321254, Length=234, Percent_Identity=31.1965811965812, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321904, Length=220, Percent_Identity=30, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922554, Length=224, Percent_Identity=33.9285714285714, Blast_Score=111, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 49194; Mature: 49063
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETSTPPHEPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFG CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH NIYSRITNPTNAVLEERVAALEGGTAALAVASGHAAQHLVFHTLLTPGDEFIASRKLYGG HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCC SINQFNHAFKSFGWNVVWADPDDISSFEKAVTPKTKAIFTESIANPGGVVTDIAAISAVA CHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KKAGVPLIVDNTLATPYLWQPIRHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWSATD HHCCCCEEECCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCEEEEECCCCCCCCCC RYPFLSKPRPEYSGMVLHETFGNFAFAIAARVLGLRDLSRDSPSGQRMRPALLVAGVDGG CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC MDGVVERVAILESLVGEMVRLEVAPDRFDVVELGRVFRQPFNGEPVGAGGQGGAGELAGV HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DRSVVLDQHDGPGGAARLGAVRLIELLEVGDEIAAALGRAGLDDQLPGGMVERAEHRHIL CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHH GLTRRRHPQVGAGLRPGTGEVGMGQRLALVAIQQHDVACRGLLLAQS HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHEEEEECC >Mature Secondary Structure TDETSTPPHEPGFATLAIHAGAQPDPTTGARATPIYQTTSFVFDDVDHAAALFGLQTFG CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH NIYSRITNPTNAVLEERVAALEGGTAALAVASGHAAQHLVFHTLLTPGDEFIASRKLYGG HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCC SINQFNHAFKSFGWNVVWADPDDISSFEKAVTPKTKAIFTESIANPGGVVTDIAAISAVA CHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KKAGVPLIVDNTLATPYLWQPIRHGADIVIHSATKFLGGHGNSIGGVIVDAGTFDWSATD HHCCCCEEECCCCCCCHHHHHHHCCCCEEEECHHHHHCCCCCCCCEEEEECCCCCCCCCC RYPFLSKPRPEYSGMVLHETFGNFAFAIAARVLGLRDLSRDSPSGQRMRPALLVAGVDGG CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC MDGVVERVAILESLVGEMVRLEVAPDRFDVVELGRVFRQPFNGEPVGAGGQGGAGELAGV HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC DRSVVLDQHDGPGGAARLGAVRLIELLEVGDEIAAALGRAGLDDQLPGGMVERAEHRHIL CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHH GLTRRRHPQVGAGLRPGTGEVGMGQRLALVAIQQHDVACRGLLLAQS HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]