| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is thiL [H]
Identifier: 154248202
GI number: 154248202
Start: 4747635
End: 4748645
Strand: Direct
Name: thiL [H]
Synonym: Xaut_4282
Alternate gene names: 154248202
Gene position: 4747635-4748645 (Clockwise)
Preceding gene: 154248201
Following gene: 154248204
Centisome position: 89.43
GC content: 72.3
Gene sequence:
>1011_bases ATGGCGGAAGGCGGCGACGGGGCAGGGGGATCGGGCGAGGATCGCTTCATCGCGCGCTTCCTGCGTCCCATCGCCGGTTC GTCCGCCGCCCTGGGCCTGCTCGACGATGCCGCACTGCTGACCCCGCCCGAGGGCTGCGACCTGGTTCTCACCAAGGACG CCGTGGTGGCAGGGGTCCATTTCTTCGCCGACGATCCGCCCGCCTCCATCGCCCGCAAGGCGCTGCGGGTGAACCTCTCC GACCTTGCCGCCAAGGGCGCCGACCCGCTCGGCGCCCTGCTGGCGCTGGCCCTGCCCAAGGGCACGCCAGACGCCTGGAT GGAAGCCTTCGCCGCCGCGCTGGGCGAGGATACGGAGCGCTATCTGTGCCCCATTCTCGGCGGCGATACAGTCTCCATCC CCGGTCCGGTCACCATCACGCTCACCGCTTTGGGCTCGGTGCCGAAGGGGGCCTTCGTGCCTCGCACGGGGGCCAGGCCC GGCCAGGCCATCCTCGTCACCGGCACCATCGGCGATGCCGCGCTGGGCCTGCGGCTTCGGCAGGACGGCAAGGCTGCGGC CTTCGCCGGCCTCAGCGACGAGCAGCGCGGCCATCTGCTGGACCGCTATCTGCACCCCCAGCCCCGTCTCGCCATCGCAC CGGTGCTGCGCCGCTACGCCAAGTCCGCCATGGATGTGTCCGACGGGCTTGCCGGCGACGTGGCGAAGATGCTCGCCGCT TCGGGCTGCGGCGGGCGCATCGAGGCGCGGCGGGTGCCGGTGTCGGCCGCCGCTGCGGAGGCCATCGCAGCCGACGCCGG CCTGTTCAGGACCGCGATCACTGGCGGGGACGATTACGAGGTGGTGGCCTGCGTGCCCCATGCCCTGGTCCACGTCTTCA CCGCCGAGGCGGCGCGGGTGGGCGTACCGGTGACGCTGATCGGCGAGACGCGGGAGCAGCCCGGCCTTGATGTGACCGAT GCCGGCGGCCATCCCCTCGACCTCGGCGCCGGCAGCTTCAGCCACTTCTGA
Upstream 100 bases:
>100_bases GCCGGCGCCTTCCTCGATCGCGACGAGACCGGCATGGTCAACGCCGTGCTGGACGCTCTGGCCCACGACCTGCGCCCCGA CGAGTTCAAGGGCGGCTGAC
Downstream 100 bases:
>100_bases GCCGGCGGGTCCGCGGCGCTATCCTAGCGCCACCAGCGCCGCCCCGGCGGCGATGAGGACCACGCCGAGGGTCGCCAGCG CGCTCAGGCGCTCGCCCAGG
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAEGGDGAGGSGEDRFIARFLRPIAGSSAALGLLDDAALLTPPEGCDLVLTKDAVVAGVHFFADDPPASIARKALRVNLS DLAAKGADPLGALLALALPKGTPDAWMEAFAAALGEDTERYLCPILGGDTVSIPGPVTITLTALGSVPKGAFVPRTGARP GQAILVTGTIGDAALGLRLRQDGKAAAFAGLSDEQRGHLLDRYLHPQPRLAIAPVLRRYAKSAMDVSDGLAGDVAKMLAA SGCGGRIEARRVPVSAAAAEAIAADAGLFRTAITGGDDYEVVACVPHALVHVFTAEAARVGVPVTLIGETREQPGLDVTD AGGHPLDLGAGSFSHF
Sequences:
>Translated_336_residues MAEGGDGAGGSGEDRFIARFLRPIAGSSAALGLLDDAALLTPPEGCDLVLTKDAVVAGVHFFADDPPASIARKALRVNLS DLAAKGADPLGALLALALPKGTPDAWMEAFAAALGEDTERYLCPILGGDTVSIPGPVTITLTALGSVPKGAFVPRTGARP GQAILVTGTIGDAALGLRLRQDGKAAAFAGLSDEQRGHLLDRYLHPQPRLAIAPVLRRYAKSAMDVSDGLAGDVAKMLAA SGCGGRIEARRVPVSAAAAEAIAADAGLFRTAITGGDDYEVVACVPHALVHVFTAEAARVGVPVTLIGETREQPGLDVTD AGGHPLDLGAGSFSHF >Mature_335_residues AEGGDGAGGSGEDRFIARFLRPIAGSSAALGLLDDAALLTPPEGCDLVLTKDAVVAGVHFFADDPPASIARKALRVNLSD LAAKGADPLGALLALALPKGTPDAWMEAFAAALGEDTERYLCPILGGDTVSIPGPVTITLTALGSVPKGAFVPRTGARPG QAILVTGTIGDAALGLRLRQDGKAAAFAGLSDEQRGHLLDRYLHPQPRLAIAPVLRRYAKSAMDVSDGLAGDVAKMLAAS GCGGRIEARRVPVSAAAAEAIAADAGLFRTAITGGDDYEVVACVPHALVHVFTAEAARVGVPVTLIGETREQPGLDVTDA GGHPLDLGAGSFSHF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=328, Percent_Identity=40.5487804878049, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34103; Mature: 33972
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGGDGAGGSGEDRFIARFLRPIAGSSAALGLLDDAALLTPPEGCDLVLTKDAVVAGVH CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCEEEECCHHEEEEE FFADDPPASIARKALRVNLSDLAAKGADPLGALLALALPKGTPDAWMEAFAAALGEDTER EECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC YLCPILGGDTVSIPGPVTITLTALGSVPKGAFVPRTGARPGQAILVTGTIGDAALGLRLR EEEEEECCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCEEEC QDGKAAAFAGLSDEQRGHLLDRYLHPQPRLAIAPVLRRYAKSAMDVSDGLAGDVAKMLAA CCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SGCGGRIEARRVPVSAAAAEAIAADAGLFRTAITGGDDYEVVACVPHALVHVFTAEAARV CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHHC GVPVTLIGETREQPGLDVTDAGGHPLDLGAGSFSHF CCCEEEEECCCCCCCCCEECCCCCEEECCCCCCCCC >Mature Secondary Structure AEGGDGAGGSGEDRFIARFLRPIAGSSAALGLLDDAALLTPPEGCDLVLTKDAVVAGVH CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCEEEECCHHEEEEE FFADDPPASIARKALRVNLSDLAAKGADPLGALLALALPKGTPDAWMEAFAAALGEDTER EECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC YLCPILGGDTVSIPGPVTITLTALGSVPKGAFVPRTGARPGQAILVTGTIGDAALGLRLR EEEEEECCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCEEEC QDGKAAAFAGLSDEQRGHLLDRYLHPQPRLAIAPVLRRYAKSAMDVSDGLAGDVAKMLAA CCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SGCGGRIEARRVPVSAAAAEAIAADAGLFRTAITGGDDYEVVACVPHALVHVFTAEAARV CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHHHHHHHC GVPVTLIGETREQPGLDVTDAGGHPLDLGAGSFSHF CCCEEEEECCCCCCCCCEECCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]