| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248109
Identifier: 154248109
GI number: 154248109
Start: 4633730
End: 4635238
Strand: Reverse
Name: 154248109
Synonym: Xaut_4189
Alternate gene names: NA
Gene position: 4635238-4633730 (Counterclockwise)
Preceding gene: 154248110
Following gene: 154248108
Centisome position: 87.31
GC content: 69.32
Gene sequence:
>1509_bases ATGAGCGCATATTCCGAGCTTTCCGCCCATTTCACCCGCACCGCCGCCCTCGGCAATGGCATCGGCATCCTGCAGTGGGA CAGCGACACCATGATGCCCAAGGGTGCCGCCGAAACCCGCGCCGAGAGTCTCGCGCTGCTGCGGGTGCTCCATCACGGAA TGGTGACCGACCCGCGCATCGGCGACTGGCTCGCCGGCGCCTCCGGCGAGGATCTCGGCCCGTGGGAACAGGCGAACGTG CGCGAGATCGAGCGGCAATACACCGTGCAGACCGCCCTGCCCGCCGATCTCGTGGACGCCGCGAGCCGGGCTTCGTCCAA GTGCGAGATGGCCTGGCGCAAGGCCCGCGCCGAGGCGGATTTCCCCGCGCTCCTGCCCTATCTGGAAGAGGTGCTGCGCC TGCAGCGGGAGATGGGACAGGCCAAGGGCGAGAAGCTCGGCCTCTCCACCTATGACGCGCTGTTGAACGACTACGAGCCC GGTGGCCGCTCCGCGCGCATCGACGCCTTGTTCGACGATCTCGCCCAGTTTCTGCCCGCCTTCACCGAGCAGGTGCTGGA GGTGCAGTCCCGCCGCCCGGCGACGCCGCCCTTATCCGGCCCGTTCGCGGTTGAGGCCCAGCGCGCGTTGGGCGTCGAGA TGATGAGGACGGTGGGCTTCGATTTCGACCGTGGCCGCCTCGATGTCTCCACCCACCCCTTCTGCGGCGGCGCCGACAAC GACGTGCGCATCACCACGCGCTACGACGAGGCCAATTTCTCCAAGGCCCTCATGGGGGTGCTGCACGAAACCGGCCACGC CCTCTACGAGCAGGGCCGCCCGCGCGACTACATCTTCCAGCCGGTGGGACAGGCCCGCTCCATGAGCGTGCACGAGAGCC AGTCCCTGCTGATGGAGATGCAGGCCTGCCGCAGCCGCGAATTCCTCACCTTCGCCGCCCCCCGCATGCGCGCCGCCTTC AATGGCGCCGGCCCCGCCTGGGAGGCCGAGGCCCTGTGGCGCTCCTATACCCGGGTGGAGCGCGGCTTCATCCGCGTGGA TGCGGACGAGGTGACTTATCCCGCCCATGTCATCCTGCGCTATCGCCTCGAAAAGGCGCTGATCGGCGACGAGATGAAGC TGTCCGACCTGCCCGGCGCCTGGGCCGAGGGCATGAAGACGCTGCTGGGCGTGGTGCCGCCGGACGACCGGCTCGGCTGC CTGCAGGATATCCATTGGCCGAGCGGTGGCTGGGGCTACTTCCCCACCTATACCCTCGGTGCCATGACGGCGGCGCAGCT GTTCGACGCCGCCTGCAAGGCCGACCCGTCCATCCTGCCCGGCATCGCCCGCGGCGATTTCGCGCCGCTGCTGGCGTGGC TGCGCACCAACGTCCACAGCCAGGGATCGCTGCTGGAGACGGACGCTCTGCTGACCCGCGCCACCGGCCGGCCCCTCGAC GCCTCGGTGTTCAAGGCCCACCTGGTGCGGCGCTACGGCGGCGAGATGGAGCAGCACCAGGCGGCGTGA
Upstream 100 bases:
>100_bases GGGCGGCTGGCGTCGGGGGCTTTTCTTGGCGGGCGCGGTTCTCTACCGTCGCACCATCGCTTTCAAACACGGCCGTCCGG CCATCGGGATTTTCACGACC
Downstream 100 bases:
>100_bases GATCTGCCGGGGAAGGCCCCCCAACCCCTTCCCCGGCAAAGCTTCGCGATTTTTGCATCCGCCTGTCGGCCATGGGCATA CTCCCGCGTCCTAGGACAAG
Product: carboxypeptidase Taq
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MSAYSELSAHFTRTAALGNGIGILQWDSDTMMPKGAAETRAESLALLRVLHHGMVTDPRIGDWLAGASGEDLGPWEQANV REIERQYTVQTALPADLVDAASRASSKCEMAWRKARAEADFPALLPYLEEVLRLQREMGQAKGEKLGLSTYDALLNDYEP GGRSARIDALFDDLAQFLPAFTEQVLEVQSRRPATPPLSGPFAVEAQRALGVEMMRTVGFDFDRGRLDVSTHPFCGGADN DVRITTRYDEANFSKALMGVLHETGHALYEQGRPRDYIFQPVGQARSMSVHESQSLLMEMQACRSREFLTFAAPRMRAAF NGAGPAWEAEALWRSYTRVERGFIRVDADEVTYPAHVILRYRLEKALIGDEMKLSDLPGAWAEGMKTLLGVVPPDDRLGC LQDIHWPSGGWGYFPTYTLGAMTAAQLFDAACKADPSILPGIARGDFAPLLAWLRTNVHSQGSLLETDALLTRATGRPLD ASVFKAHLVRRYGGEMEQHQAA
Sequences:
>Translated_502_residues MSAYSELSAHFTRTAALGNGIGILQWDSDTMMPKGAAETRAESLALLRVLHHGMVTDPRIGDWLAGASGEDLGPWEQANV REIERQYTVQTALPADLVDAASRASSKCEMAWRKARAEADFPALLPYLEEVLRLQREMGQAKGEKLGLSTYDALLNDYEP GGRSARIDALFDDLAQFLPAFTEQVLEVQSRRPATPPLSGPFAVEAQRALGVEMMRTVGFDFDRGRLDVSTHPFCGGADN DVRITTRYDEANFSKALMGVLHETGHALYEQGRPRDYIFQPVGQARSMSVHESQSLLMEMQACRSREFLTFAAPRMRAAF NGAGPAWEAEALWRSYTRVERGFIRVDADEVTYPAHVILRYRLEKALIGDEMKLSDLPGAWAEGMKTLLGVVPPDDRLGC LQDIHWPSGGWGYFPTYTLGAMTAAQLFDAACKADPSILPGIARGDFAPLLAWLRTNVHSQGSLLETDALLTRATGRPLD ASVFKAHLVRRYGGEMEQHQAA >Mature_501_residues SAYSELSAHFTRTAALGNGIGILQWDSDTMMPKGAAETRAESLALLRVLHHGMVTDPRIGDWLAGASGEDLGPWEQANVR EIERQYTVQTALPADLVDAASRASSKCEMAWRKARAEADFPALLPYLEEVLRLQREMGQAKGEKLGLSTYDALLNDYEPG GRSARIDALFDDLAQFLPAFTEQVLEVQSRRPATPPLSGPFAVEAQRALGVEMMRTVGFDFDRGRLDVSTHPFCGGADND VRITTRYDEANFSKALMGVLHETGHALYEQGRPRDYIFQPVGQARSMSVHESQSLLMEMQACRSREFLTFAAPRMRAAFN GAGPAWEAEALWRSYTRVERGFIRVDADEVTYPAHVILRYRLEKALIGDEMKLSDLPGAWAEGMKTLLGVVPPDDRLGCL QDIHWPSGGWGYFPTYTLGAMTAAQLFDAACKADPSILPGIARGDFAPLLAWLRTNVHSQGSLLETDALLTRATGRPLDA SVFKAHLVRRYGGEMEQHQAA
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 55392; Mature: 55261
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYSELSAHFTRTAALGNGIGILQWDSDTMMPKGAAETRAESLALLRVLHHGMVTDPRI CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GDWLAGASGEDLGPWEQANVREIERQYTVQTALPADLVDAASRASSKCEMAWRKARAEAD CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC FPALLPYLEEVLRLQREMGQAKGEKLGLSTYDALLNDYEPGGRSARIDALFDDLAQFLPA CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH FTEQVLEVQSRRPATPPLSGPFAVEAQRALGVEMMRTVGFDFDRGRLDVSTHPFCGGADN HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC DVRITTRYDEANFSKALMGVLHETGHALYEQGRPRDYIFQPVGQARSMSVHESQSLLMEM CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCHHHHHHHHHHH QACRSREFLTFAAPRMRAAFNGAGPAWEAEALWRSYTRVERGFIRVDADEVTYPAHVILR HHHCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHH YRLEKALIGDEMKLSDLPGAWAEGMKTLLGVVPPDDRLGCLQDIHWPSGGWGYFPTYTLG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH AMTAAQLFDAACKADPSILPGIARGDFAPLLAWLRTNVHSQGSLLETDALLTRATGRPLD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCC ASVFKAHLVRRYGGEMEQHQAA HHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure SAYSELSAHFTRTAALGNGIGILQWDSDTMMPKGAAETRAESLALLRVLHHGMVTDPRI CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GDWLAGASGEDLGPWEQANVREIERQYTVQTALPADLVDAASRASSKCEMAWRKARAEAD CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC FPALLPYLEEVLRLQREMGQAKGEKLGLSTYDALLNDYEPGGRSARIDALFDDLAQFLPA CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH FTEQVLEVQSRRPATPPLSGPFAVEAQRALGVEMMRTVGFDFDRGRLDVSTHPFCGGADN HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC DVRITTRYDEANFSKALMGVLHETGHALYEQGRPRDYIFQPVGQARSMSVHESQSLLMEM CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHCCCHHHHHHHHHHH QACRSREFLTFAAPRMRAAFNGAGPAWEAEALWRSYTRVERGFIRVDADEVTYPAHVILR HHHCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHH YRLEKALIGDEMKLSDLPGAWAEGMKTLLGVVPPDDRLGCLQDIHWPSGGWGYFPTYTLG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHH AMTAAQLFDAACKADPSILPGIARGDFAPLLAWLRTNVHSQGSLLETDALLTRATGRPLD HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCC ASVFKAHLVRRYGGEMEQHQAA HHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]