| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248019
Identifier: 154248019
GI number: 154248019
Start: 4535778
End: 4536518
Strand: Reverse
Name: 154248019
Synonym: Xaut_4098
Alternate gene names: NA
Gene position: 4536518-4535778 (Counterclockwise)
Preceding gene: 154248020
Following gene: 154248017
Centisome position: 85.45
GC content: 74.36
Gene sequence:
>741_bases ATGACCCTGCATGTGACCCTGCCCCCGGCATCGCGGCCGGGCCTGCTCGCCTCCGTGGCCGATCTTGCCGAGATGGAGGT GGCGCTCGGCGCCGGCGCCGACATCGTGGACCTGAAGAACCCGGCCGAGGGGGCGCTCGGCGCCTGGGCGGAGGCGCCGC TCAAGGCCGCCGTCGCCCGCTGGCGCGCGGCGGGCTGCGTCACCGGCCTCAGCGCCACCGTGGGCGACCAGCCCCTGGAC GCCGCGACCATCCTTGCCGCCGCCCGGCGCACCGCCTCGACCGGCGTGCCGCTGGTGAAGATCGGCTTTCCCCTGCCCTT GGACGGCGCCGGGGCGGCGCTGGCCCCAGTCCTCGATGCCCTGCGGCCGCTGGCGCTGGAGACGCGGCTCATCGCGGTTC TGTTCGCCGACCAGGATCCGGACCTCTCCACCATCGCCCAATTCGCCGAAGCCGGCTTCCACGGGGTGATGCTGGATACG GCGGACAAGGCGGCCGGCGGCCTCCTCGCCCACCTCCCGGTGCCGCGCCTCGCCGGCTTTGTGGCAGAGGCCAGGGCGGC CGGCCTGCTCACCGGCCTTGCGGGCTCCCTGAAGCTTCAGGACATCGCGCCTCTGGCAACGCTCAAACCCCACTATCTCG GCTTCCGCGGCGCCCTGTGCGCGACCGGGCGCACCAGCGCCCTCGACCCGGCACAGCTCGCTCGGGTGCGGGAGGAACTG AAGGGACGGGTGGCGGCCTGA
Upstream 100 bases:
>100_bases ATCTCTCCATCGCCATCGAGAAGACCGCCGGCCCCGCCGAGCGCGAGGCATGGGACTGGCTGTGCGAGACCATCGCCGAC CACCGGGCGCGGGCGGCATC
Downstream 100 bases:
>100_bases CGGGCGGGGATGGCACCGGCGCTGTCCGCTTTCGGGCAATCAAGGCGAGCCGACCCGCGATCACTCCGTCATGCCCGGCC TTGTGCCGGGTATCCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLD AATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDT ADKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL KGRVAA
Sequences:
>Translated_246_residues MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLD AATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDT ADKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL KGRVAA >Mature_245_residues TLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLDA ATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTA DKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREELK GRVAA
Specific function: Unknown
COG id: COG1891
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0264 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007565 [H]
Pfam domain/function: PF04476 DUF556 [H]
EC number: NA
Molecular weight: Translated: 24872; Mature: 24741
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVAR CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH WRAAGCVTGLSATVGDQPLDAATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDA HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH LRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTADKAAGGLLAHLPVPRLAGF HHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCEEECCCHHHHHHH VAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL HHHHHHHHHHHHHCCCCCHHHCCCHHHCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHHH KGRVAA CCCCCC >Mature Secondary Structure TLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVAR EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH WRAAGCVTGLSATVGDQPLDAATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDA HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH LRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTADKAAGGLLAHLPVPRLAGF HHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCEEECCCHHHHHHH VAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL HHHHHHHHHHHHHCCCCCHHHCCCHHHCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHHH KGRVAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA