BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

Click here to switch to the map view.

The map label for this gene is budC [H]

Identifier: 154247963

GI number: 154247963

Start: 4470151

End: 4470936

Strand: Reverse

Name: budC [H]

Synonym: Xaut_4042

Alternate gene names: 154247963

Gene position: 4470936-4470151 (Counterclockwise)

Preceding gene: 154247964

Following gene: 154247962

Centisome position: 84.22

GC content: 69.72

Gene sequence:

>786_bases
ATGCCCAGTCTGAAGGACAAGAGCATCGTCATCACCGGCGCGGCCGGCGGCATCGGCGCCGCCATCGCGAAAGCCCTTGC
GGCGGACGGCGCCCGCATCACTGTGGCCGACCTCTCGGAGCCCGCCGCCCGCGCGGTGGCCGGGGAGATCACGGCCGCCG
GCGGCACCGCCATCGCGGTTGCGGTGGATGTGCGCCAGCGGGCGCAGGTGCGCGCCCTGCTCGATGAGGCCGTGGCCGCC
CATGGCCGGCTCGACGTGCTGTTCAACAATGCCGGCGTGGCCCAGACCCGGCCCTTTCTCGACATCACGGAAGACGACTG
GCGCTTCGTCACCGACGTGAACGCGCTGGGCGTGCTCATCGGCATGCAGGAGGCCATCAAGACGTTCAAAAGACAGGGCG
GCGGCGGCAAGATCGTCAACACTGCCTCCATCGCCGCCAAGCAGGGCTACGAGCCGCTGGCCCATTATTGCGCCAGCAAG
TTCGCCGTGGTGGCCTTGACCCAGGCGGCGGCGCGCGCCTTCGGCAAGGATCAGATCACCGTCAACGCCTTCTGCCCCGG
CGTGGTCGCCACCGACATGTGGAAGATCATCGACAAGGGCTTCCGCGACAGCGGCCTCACCAGCGCCGACAACGAGGCGT
TCGACACCTTCGCCGCCGGCGCCGTGCTGGGCCGGCCCTCCACCCCGGCGGACCTCGTGGGGGTGGCGCGTTTCCTCGCC
TCCTCCGCCTCCGACTTCATGACCGGCCAGTCCCTGCTGGTGGACGGCGGCATGGTCTTCACCTGA

Upstream 100 bases:

>100_bases
CGGCCGCTGACCGCTCGTCCACCGCCGCCGCAGCCCGGAAATGGCCGCCCGAGAGGGCGGTCAACGGCGGCGTGTGGCCA
ATCAAAATCCAGGAGGAACC

Downstream 100 bases:

>100_bases
GCGGGAGAGCGGCGATGAGCGAGCAGTCGATATCGAACGAGCTGAAGTCCATGAACCTTCGGTTCGCCACCCTCGGCAAA
GCCTTGCCCCAGGCCATGGG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: Acetoin(diacetyl) reductase; AR; Meso-2,3-butanediol dehydrogenase [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPSLKDKSIVITGAAGGIGAAIAKALAADGARITVADLSEPAARAVAGEITAAGGTAIAVAVDVRQRAQVRALLDEAVAA
HGRLDVLFNNAGVAQTRPFLDITEDDWRFVTDVNALGVLIGMQEAIKTFKRQGGGGKIVNTASIAAKQGYEPLAHYCASK
FAVVALTQAAARAFGKDQITVNAFCPGVVATDMWKIIDKGFRDSGLTSADNEAFDTFAAGAVLGRPSTPADLVGVARFLA
SSASDFMTGQSLLVDGGMVFT

Sequences:

>Translated_261_residues
MPSLKDKSIVITGAAGGIGAAIAKALAADGARITVADLSEPAARAVAGEITAAGGTAIAVAVDVRQRAQVRALLDEAVAA
HGRLDVLFNNAGVAQTRPFLDITEDDWRFVTDVNALGVLIGMQEAIKTFKRQGGGGKIVNTASIAAKQGYEPLAHYCASK
FAVVALTQAAARAFGKDQITVNAFCPGVVATDMWKIIDKGFRDSGLTSADNEAFDTFAAGAVLGRPSTPADLVGVARFLA
SSASDFMTGQSLLVDGGMVFT
>Mature_260_residues
PSLKDKSIVITGAAGGIGAAIAKALAADGARITVADLSEPAARAVAGEITAAGGTAIAVAVDVRQRAQVRALLDEAVAAH
GRLDVLFNNAGVAQTRPFLDITEDDWRFVTDVNALGVLIGMQEAIKTFKRQGGGGKIVNTASIAAKQGYEPLAHYCASKF
AVVALTQAAARAFGKDQITVNAFCPGVVATDMWKIIDKGFRDSGLTSADNEAFDTFAAGAVLGRPSTPADLVGVARFLAS
SASDFMTGQSLLVDGGMVFT

Specific function: Catalyzes the reversible reduction of (S)-acetoin to 2,3-butanediol in the presence of NADH [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=263, Percent_Identity=32.6996197718631, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI32483357, Length=258, Percent_Identity=28.2945736434109, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI40254992, Length=253, Percent_Identity=29.2490118577075, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=31.1740890688259, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI31542939, Length=203, Percent_Identity=33.9901477832512, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI66933014, Length=258, Percent_Identity=30.6201550387597, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=30.0847457627119, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=26.7924528301887, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI10190704, Length=262, Percent_Identity=29.3893129770992, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=28.740157480315, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=23.4615384615385, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=34.1040462427746, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=32.0855614973262, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI40254986, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=24.5136186770428, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI210032110, Length=201, Percent_Identity=26.3681592039801, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI10190746, Length=221, Percent_Identity=27.6018099547511, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4758504, Length=271, Percent_Identity=29.8892988929889, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI166795268, Length=204, Percent_Identity=31.3725490196078, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI225579078, Length=208, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI33667109, Length=208, Percent_Identity=26.4423076923077, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI186928839, Length=204, Percent_Identity=28.921568627451, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI223718074, Length=173, Percent_Identity=32.9479768786127, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI83715985, Length=181, Percent_Identity=33.7016574585635, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI126723191, Length=193, Percent_Identity=31.6062176165803, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI150247226, Length=195, Percent_Identity=30.2564102564103, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=37.7431906614786, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=32.1705426356589, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=35.9073359073359, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=31.7460317460317, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=32.421875, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787335, Length=258, Percent_Identity=27.906976744186, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=31.0077519379845, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1789378, Length=260, Percent_Identity=29.6153846153846, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=28.4584980237154, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=29.4573643410853, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=33.6842105263158, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367365, Length=259, Percent_Identity=28.1853281853282, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787526, Length=259, Percent_Identity=25.4826254826255, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=33.59375, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=31.640625, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=29.6442687747036, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=30.1204819277108, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=264, Percent_Identity=28.4090909090909, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=256, Percent_Identity=30.46875, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=272, Percent_Identity=29.0441176470588, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=28.3018867924528, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=267, Percent_Identity=29.5880149812734, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=32.2751322751323, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=27.6752767527675, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.811320754717, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=264, Percent_Identity=26.5151515151515, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=274, Percent_Identity=31.021897810219, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=194, Percent_Identity=28.3505154639175, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=28.0442804428044, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=27.4436090225564, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=28.4644194756554, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=198, Percent_Identity=29.2929292929293, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=28.8557213930348, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=273, Percent_Identity=26.7399267399267, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=27.4436090225564, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=28.6245353159851, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=273, Percent_Identity=26.7399267399267, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=270, Percent_Identity=25.5555555555556, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=279, Percent_Identity=31.1827956989247, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=26.6423357664234, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=283, Percent_Identity=26.8551236749117, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17558628, Length=190, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=193, Percent_Identity=35.7512953367876, Blast_Score=101, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322227, Length=253, Percent_Identity=25.6916996047431, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=30.6532663316583, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21357041, Length=266, Percent_Identity=34.5864661654135, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI28571526, Length=266, Percent_Identity=33.8345864661654, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21355319, Length=263, Percent_Identity=30.0380228136882, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=29.9610894941634, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=30.1960784313725, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24643142, Length=260, Percent_Identity=33.0769230769231, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=29.6875, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=32.7956989247312, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17737361, Length=275, Percent_Identity=30.5454545454545, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24640492, Length=201, Percent_Identity=28.3582089552239, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281364494, Length=211, Percent_Identity=29.8578199052133, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=29.3193717277487, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641232, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364892, Length=169, Percent_Identity=31.3609467455621, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24580925, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007236, Length=203, Percent_Identity=27.0935960591133, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24665243, Length=199, Percent_Identity=26.6331658291457, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221331218, Length=199, Percent_Identity=26.6331658291457, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24663911, Length=204, Percent_Identity=27.9411764705882, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24647946, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45553409, Length=211, Percent_Identity=28.436018957346, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24647948, Length=211, Percent_Identity=28.436018957346, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24641388, Length=202, Percent_Identity=32.1782178217822, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24665247, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221331216, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24581726, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014007
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.304 [H]

Molecular weight: Translated: 26787; Mature: 26656

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLKDKSIVITGAAGGIGAAIAKALAADGARITVADLSEPAARAVAGEITAAGGTAIAV
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEECCCCEEEE
AVDVRQRAQVRALLDEAVAAHGRLDVLFNNAGVAQTRPFLDITEDDWRFVTDVNALGVLI
EECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEHHHHHHHHH
GMQEAIKTFKRQGGGGKIVNTASIAAKQGYEPLAHYCASKFAVVALTQAAARAFGKDQIT
HHHHHHHHHHHCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNAFCPGVVATDMWKIIDKGFRDSGLTSADNEAFDTFAAGAVLGRPSTPADLVGVARFLA
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SSASDFMTGQSLLVDGGMVFT
HCHHHHHCCCEEEECCCEEEC
>Mature Secondary Structure 
PSLKDKSIVITGAAGGIGAAIAKALAADGARITVADLSEPAARAVAGEITAAGGTAIAV
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEECCCCEEEE
AVDVRQRAQVRALLDEAVAAHGRLDVLFNNAGVAQTRPFLDITEDDWRFVTDVNALGVLI
EECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEECCCCCCEEEEHHHHHHHHH
GMQEAIKTFKRQGGGGKIVNTASIAAKQGYEPLAHYCASKFAVVALTQAAARAFGKDQIT
HHHHHHHHHHHCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNAFCPGVVATDMWKIIDKGFRDSGLTSADNEAFDTFAAGAVLGRPSTPADLVGVARFLA
EEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
SSASDFMTGQSLLVDGGMVFT
HCHHHHHCCCEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11173520 [H]