| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247938
Identifier: 154247938
GI number: 154247938
Start: 4444873
End: 4445496
Strand: Reverse
Name: 154247938
Synonym: Xaut_4017
Alternate gene names: NA
Gene position: 4445496-4444873 (Counterclockwise)
Preceding gene: 154247939
Following gene: 154247937
Centisome position: 83.74
GC content: 68.11
Gene sequence:
>624_bases ATGCCGACCCGCTCCCCAGGGAGGTGGAGCAACGCTGGGGGCTGCGATTTCGCCGCGCGGCCATCTCTCTCCGCCGTGGA ACAGAACGTCCCGTGGTCGCCGGTTGTCGATCCGGCCATCGTGCTTCTCGCCCAACAGCCCGCGTTTCTTCCGGGAGCGC CCAGCGTGTCGTTCGGCGGCATGGTTGCGCCGCGCGATAGCACCGAGGGCCGATACTGGGTCCATGGTCCGGCACCTCAT GCCGCGCAGGTGCTGCTGCTGACCGGCACATGCTCCGAGGCGCCACTGGCGGCAGTGATCCCGCTGGACGCAGACACGAT TGGGCGGGTGGAGGCACTGACCCGCTTCTGGCGCGCCGTGGAGGGTCGGCCGGCGATCCCCGACACCCGCATCACCGCGC AGCAGCGTGGCCGGCTGCGCACCATGATGCTGGCGGCCGATGGTCGGGCGAACGGCGCCAGCTATCGCGATATCGCCATC GTCCTTTACAGCCACAAGCGCGTCGCGTCCGAGCCCTGGAAAACCTCGGCGCTGCGCGACAAGGTCATCGGCCTCGTCAA AGGCGGCCTCGCCATGATCGGCGGTGGTTATCTGAAGCTGCTGCGTCATCGCAGAAGACCATAG
Upstream 100 bases:
>100_bases TATTTCGACATGCTGCCGGTGGAGGGCCTCGCCTGGGAATGCCTGCGCCGGGATGAGACCTACCAGGAGCACTACCAGTC CCTCGTGAAGGCCGGCTCGG
Downstream 100 bases:
>100_bases TCGCATCGCCGGCATCTTGAGGGTGGGGATTTTCGCGCCCCTCAACTTCCCCATCCCCCTCGACAGCAGCCCTTCGCCAC CGTGATCGCCATCCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPTRSPGRWSNAGGCDFAARPSLSAVEQNVPWSPVVDPAIVLLAQQPAFLPGAPSVSFGGMVAPRDSTEGRYWVHGPAPH AAQVLLLTGTCSEAPLAAVIPLDADTIGRVEALTRFWRAVEGRPAIPDTRITAQQRGRLRTMMLAADGRANGASYRDIAI VLYSHKRVASEPWKTSALRDKVIGLVKGGLAMIGGGYLKLLRHRRRP
Sequences:
>Translated_207_residues MPTRSPGRWSNAGGCDFAARPSLSAVEQNVPWSPVVDPAIVLLAQQPAFLPGAPSVSFGGMVAPRDSTEGRYWVHGPAPH AAQVLLLTGTCSEAPLAAVIPLDADTIGRVEALTRFWRAVEGRPAIPDTRITAQQRGRLRTMMLAADGRANGASYRDIAI VLYSHKRVASEPWKTSALRDKVIGLVKGGLAMIGGGYLKLLRHRRRP >Mature_206_residues PTRSPGRWSNAGGCDFAARPSLSAVEQNVPWSPVVDPAIVLLAQQPAFLPGAPSVSFGGMVAPRDSTEGRYWVHGPAPHA AQVLLLTGTCSEAPLAAVIPLDADTIGRVEALTRFWRAVEGRPAIPDTRITAQQRGRLRTMMLAADGRANGASYRDIAIV LYSHKRVASEPWKTSALRDKVIGLVKGGLAMIGGGYLKLLRHRRRP
Specific function: Unknown
COG id: COG5419
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22221; Mature: 22090
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTRSPGRWSNAGGCDFAARPSLSAVEQNVPWSPVVDPAIVLLAQQPAFLPGAPSVSFGG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC MVAPRDSTEGRYWVHGPAPHAAQVLLLTGTCSEAPLAAVIPLDADTIGRVEALTRFWRAV EECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH EGRPAIPDTRITAQQRGRLRTMMLAADGRANGASYRDIAIVLYSHKRVASEPWKTSALRD CCCCCCCCCEECHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHCCCCCHHHHHHH KVIGLVKGGLAMIGGGYLKLLRHRRRP HHHHHHHCCHHHHCHHHHHHHHHHCCC >Mature Secondary Structure PTRSPGRWSNAGGCDFAARPSLSAVEQNVPWSPVVDPAIVLLAQQPAFLPGAPSVSFGG CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC MVAPRDSTEGRYWVHGPAPHAAQVLLLTGTCSEAPLAAVIPLDADTIGRVEALTRFWRAV EECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH EGRPAIPDTRITAQQRGRLRTMMLAADGRANGASYRDIAIVLYSHKRVASEPWKTSALRD CCCCCCCCCEECHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCHHCCCCCHHHHHHH KVIGLVKGGLAMIGGGYLKLLRHRRRP HHHHHHHCCHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA