| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247857
Identifier: 154247857
GI number: 154247857
Start: 4354110
End: 4354772
Strand: Reverse
Name: 154247857
Synonym: Xaut_3934
Alternate gene names: NA
Gene position: 4354772-4354110 (Counterclockwise)
Preceding gene: 154247863
Following gene: 154247856
Centisome position: 82.03
GC content: 69.68
Gene sequence:
>663_bases ATGGGTGATCGCATTCGCTTGAGCATCGACGGGCGCGCGCTGGAGGTGGAGGCGCCGGTCTCCATCCTTCAGGCCACCAC CGCCGATGGCACCCCGCTCACCGCCAATGTGGGCTGTCTCGGCCAGGGGGTGTGCGGGGCCTGTCGCTGCATGGTCCGCC GGGCAGGCGAGCGCGAGGTGTCCACGGTGCTGGCCTGCGAGACCCCGGCCGAAGACGGCATGCAGGTGAGCTTCATCGAC TATTTCACGCCGGACAAGCCGCACGTCTATGACATCGCGACCTTCACCGACAGCTGGCGCCTGTCGGACGCGGTCGCCGA CATCTTTCCCGAGGCGGCCCACTGCCGCCATTGCAGCGGCTGCGATCGGGCCTGCCCCAAGGGACTGGAGGTGCAGCGCG GCGTGGAGCTGGCGGTAGCTGGGGACTTCGCGGGCGTGGCGCAGGTGTTCGACCAGTGCGTCATGTGCAACCTGTGCACC CTCGCCTGCCCCGAGCGCATCTGGCCCAACCATCTGGGCCTCATGGTCCGCCGCGCCCTGACCGCCCTGACCCTGCGCCC CTCCGACCTCATTCGCCGCCTTAACGAACTGGAGCTGGGCGAGGCCTGCCTCGACCTGACCGGGACCGAAGCCGAGCCTG CCTCCACCCCGGCCCGGAGGTGA
Upstream 100 bases:
>100_bases CAGCCCGCCCCGGCTGGCACGGCCCTTGTTATGCCAGGGACCACCGGGGAGGAGCACCAGCGCGCCTGCCCCAACAAGAG CAAGACAGGAGCAGGGTTCG
Downstream 100 bases:
>100_bases ATTCGATGACCCACGCCACGACCTTCGCCATCCCCTACGCCGACGCCCTCGCTCGCCTCTCCCCTGGCGCCGATCCGGTG ATGCGGCCCGAGGCGCTATC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGDRIRLSIDGRALEVEAPVSILQATTADGTPLTANVGCLGQGVCGACRCMVRRAGEREVSTVLACETPAEDGMQVSFID YFTPDKPHVYDIATFTDSWRLSDAVADIFPEAAHCRHCSGCDRACPKGLEVQRGVELAVAGDFAGVAQVFDQCVMCNLCT LACPERIWPNHLGLMVRRALTALTLRPSDLIRRLNELELGEACLDLTGTEAEPASTPARR
Sequences:
>Translated_220_residues MGDRIRLSIDGRALEVEAPVSILQATTADGTPLTANVGCLGQGVCGACRCMVRRAGEREVSTVLACETPAEDGMQVSFID YFTPDKPHVYDIATFTDSWRLSDAVADIFPEAAHCRHCSGCDRACPKGLEVQRGVELAVAGDFAGVAQVFDQCVMCNLCT LACPERIWPNHLGLMVRRALTALTLRPSDLIRRLNELELGEACLDLTGTEAEPASTPARR >Mature_219_residues GDRIRLSIDGRALEVEAPVSILQATTADGTPLTANVGCLGQGVCGACRCMVRRAGEREVSTVLACETPAEDGMQVSFIDY FTPDKPHVYDIATFTDSWRLSDAVADIFPEAAHCRHCSGCDRACPKGLEVQRGVELAVAGDFAGVAQVFDQCVMCNLCTL ACPERIWPNHLGLMVRRALTALTLRPSDLIRRLNELELGEACLDLTGTEAEPASTPARR
Specific function: Unknown
COG id: COG1152
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23724; Mature: 23593
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRIRLSIDGRALEVEAPVSILQATTADGTPLTANVGCLGQGVCGACRCMVRRAGEREV CCCEEEEEECCEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHH STVLACETPAEDGMQVSFIDYFTPDKPHVYDIATFTDSWRLSDAVADIFPEAAHCRHCSG HEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCC CDRACPKGLEVQRGVELAVAGDFAGVAQVFDQCVMCNLCTLACPERIWPNHLGLMVRRAL CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHH TALTLRPSDLIRRLNELELGEACLDLTGTEAEPASTPARR HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GDRIRLSIDGRALEVEAPVSILQATTADGTPLTANVGCLGQGVCGACRCMVRRAGEREV CCEEEEEECCEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCHHH STVLACETPAEDGMQVSFIDYFTPDKPHVYDIATFTDSWRLSDAVADIFPEAAHCRHCSG HEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCC CDRACPKGLEVQRGVELAVAGDFAGVAQVFDQCVMCNLCTLACPERIWPNHLGLMVRRAL CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHH TALTLRPSDLIRRLNELELGEACLDLTGTEAEPASTPARR HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA