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The map label for this gene is yjeK [C]

Identifier: 154247831

GI number: 154247831

Start: 4325726

End: 4326814

Strand: Reverse

Name: yjeK [C]

Synonym: Xaut_3908

Alternate gene names: 154247831

Gene position: 4326814-4325726 (Counterclockwise)

Preceding gene: 154247835

Following gene: 154247830

Centisome position: 81.5

GC content: 70.8

Gene sequence:

>1089_bases
ATGCCAAACCTTCCGCAGCCGAACCTTCTGCCTCTGCCCGCCCGCGATCAAGGCACCCTGCGCTCGGGCGACGACCTCGT
CGCCGCCGGCCTTGCAGACGCGCGCGACCGCGATGCGCTGGCCCGCGTGGCCGAACGCTATGCGGTGGCAGTGACGCCGA
CGCTCGTCGACGCCATCGACCGCACCGACCCCGCCGACCCCATCGCCCGCCAGTTCGTGCCGCATCCCGCCGAGCTGGAG
GTGCGGCCGGAAGAGTTGGCGGACCCCATCGGCGATGAAGCCCACAGCCCGGTGCCTGGCATCGTCCACCGCTATCGCGA
CCGGGCGCTGCTGAAGATCGTGGGGGTGTGCGCCGTCTATTGCCGCTTCTGCTTCCGCCGCGAGATGGTGGGGCCGGGCG
CGGCAGCCACCCTGTCACCGGAAGCGCTGGAGCGGGCCTTCGCGTATCTTTCCGCCCATCCCGAGATCTGGGAGGTGATC
CTCACCGGCGGCGACCCCTTCATGCTGTCGCCCCGCCGCATGGGCGAGGTGATGGCGCGCCTCGCCGCCATCGCCCATGT
GAAGATCGTGCGCTTCCACACCCGCGTGCCCATCGCCGCGCCGGAACGGGTGAGCGATGCGCTCATTGCCGCGCTCAAGG
CGCCGGGCCTCACCTCCTACGTGGCGGTGCATGTGAACCACGCCCGCGAGCTGACGCCGGATGCCCGTTCGGCCCTCGCC
CGCATGGCGGACGCTGGCATTCCGCTCCTGTCCCAGTCGGTGCTGCTGCGTGGAGTGAACGACGAGGCGGACACCCTCGC
CGCCTTGTTCCGCAGCCTCGTGGAATGCCGGGTGAAGCCCTATTACCTGCACCATCCCGACCTTGCCCCCGGCACCGCCC
ATTTCCGCCTCGACATCGCGCGGGGACAGGAACTGATGCGCGCCCTGCGCGGGCGGCTCTCGGGCATCGCGCTGCCCACC
TATGTGCTCGACATCCCCGGCGGTGCCGGCAAGGTGCCCCTGACCCCTGGCCACATTGCGCCCGCCGGCACGCGCCTCGC
CGTCTCCGACAATTGCGGCGGCGTCCATCTCTATCCGCCGGAGCGGTGA

Upstream 100 bases:

>100_bases
TTCGGTCACGTCCATGGAATCGCTCCTTGGCATCGCCGCTCCCGGCGGGGCTCGTGAATTGGCAAGGCCGGACGCATCCC
ATATAGGTGCCCCAACGCCC

Downstream 100 bases:

>100_bases
CGCCAGCCCGCGCGGCATCCGTCGATGACCGAGGCCGTGGCATGAAGGGTGAAGACGCCCTCCGCCCGTGCTATCGGACA
GGGCAAACAGGGAGGACGCC

Product: lysine 2,3-aminomutase YodO family protein

Products: (3S)-3,6-diaminohexanoate

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MPNLPQPNLLPLPARDQGTLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAELE
VRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATLSPEALERAFAYLSAHPEIWEVI
LTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPIAAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALA
RMADAGIPLLSQSVLLRGVNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIALPT
YVLDIPGGAGKVPLTPGHIAPAGTRLAVSDNCGGVHLYPPER

Sequences:

>Translated_362_residues
MPNLPQPNLLPLPARDQGTLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAELE
VRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATLSPEALERAFAYLSAHPEIWEVI
LTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPIAAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALA
RMADAGIPLLSQSVLLRGVNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIALPT
YVLDIPGGAGKVPLTPGHIAPAGTRLAVSDNCGGVHLYPPER
>Mature_361_residues
PNLPQPNLLPLPARDQGTLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAELEV
RPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATLSPEALERAFAYLSAHPEIWEVIL
TGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPIAAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALAR
MADAGIPLLSQSVLLRGVNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIALPTY
VLDIPGGAGKVPLTPGHIAPAGTRLAVSDNCGGVHLYPPER

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=312, Percent_Identity=37.8205128205128, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: 5.4.3.2

Molecular weight: Translated: 39009; Mature: 38877

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLPQPNLLPLPARDQGTLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAID
CCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHEEEECHHHHHHHH
RTDPADPIARQFVPHPAELEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVY
CCCCCCHHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CRFCFRREMVGPGAAATLSPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMAR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHH
LAAIAHVKIVRFHTRVPIAAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALA
HHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCHHHHHHH
RMADAGIPLLSQSVLLRGVNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIA
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHH
RGQELMRALRGRLSGIALPTYVLDIPGGAGKVPLTPGHIAPAGTRLAVSDNCGGVHLYPP
HHHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC
ER
CC
>Mature Secondary Structure 
PNLPQPNLLPLPARDQGTLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAID
CCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHEEEECHHHHHHHH
RTDPADPIARQFVPHPAELEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVY
CCCCCCHHHHHHCCCCCCCEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
CRFCFRREMVGPGAAATLSPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMAR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHH
LAAIAHVKIVRFHTRVPIAAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALA
HHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCHHHHHHH
RMADAGIPLLSQSVLLRGVNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIA
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEHH
RGQELMRALRGRLSGIALPTYVLDIPGGAGKVPLTPGHIAPAGTRLAVSDNCGGVHLYPP
HHHHHHHHHHHHHCCEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-lysine

Specific reaction: L-lysine = (3S)-3,6-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]