| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247615
Identifier: 154247615
GI number: 154247615
Start: 4095324
End: 4096007
Strand: Reverse
Name: 154247615
Synonym: Xaut_3689
Alternate gene names: NA
Gene position: 4096007-4095324 (Counterclockwise)
Preceding gene: 154247626
Following gene: 154247613
Centisome position: 77.15
GC content: 60.82
Gene sequence:
>684_bases ATGGACGCAGCCCGCCAACTGATCCTCGACCGCATCGCAGACCTTGGGACGGACCTGAAAGCCGTGTCCCTCGCGCTGGG GCGCAACCACGCCTATCTGCAACAGTTCATTTCGCGGGGGGTGCCTGGCGAACTAGGCGAGCGCGACCGCAAAAAGCTCG CCATTATCTTGAAGGTAAACGATGAGCATCTCCGGTCGCGCCCGGTCGAGCACATTGACAGCATGGATGTCGCGTCGCTC GTAGATCGATCGAAGAAACGCAAGCCAGATCAGGAAGTCCGCGTCGTCGGCTATATCGGCGCCGGCGCAGAGGTCCACAC CGTCGATGACCACGAGAAGGGCGCCGGCCTTGACCTGGTGCAGGTGGACTTCCCCGTAAAGCACGGGACCGTTGGCGTCA TCGTGCGCGGCGATTCGATGCTGCCGATGTTCGAGGATGGCGACCTGATCGGCTATATCCGAGACGCATCCGGGCCGGAG CAACTGATCGGCAAAATTTGCGTCGTGAAGGTCGTTGACGGCCCTACCTATATTAAGCGTCTCAAGCGCGGGACCGAGCC GGGCCTCTATACCCTGGTTAGCGCCAATGCCAGAGACATTGAGGACGTGGATATCGAGTGGGCGGCGCGCTATCGATTCC ATCTTCCCGCCGATGAGTGGCACCGTTTGCGCGGAGCCGATTAA
Upstream 100 bases:
>100_bases GTTCGGCTCGATCATGCCGCCAATCTATAGGAATTTGCCTACCGCGCAAGAGGCAATTTCCTATTCGCCCCTAGCGTAGG GGATTTCCTATAAAGGTGTC
Downstream 100 bases:
>100_bases GCACTCACAGCCCGGCGAAATGCCGGGCTTTTTCGCGCCCGGCCAATAGGAACGAAAAATTTTCTGGTATAGGCATTTTC CTATTGACCGCCCGATAGGA
Product: putative phage repressor
Products: NA
Alternate protein names: LexA Repressor; Transcriptional Regulator; LexA-Family Protein; XRE Family Transcriptional Regulator
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MDAARQLILDRIADLGTDLKAVSLALGRNHAYLQQFISRGVPGELGERDRKKLAIILKVNDEHLRSRPVEHIDSMDVASL VDRSKKRKPDQEVRVVGYIGAGAEVHTVDDHEKGAGLDLVQVDFPVKHGTVGVIVRGDSMLPMFEDGDLIGYIRDASGPE QLIGKICVVKVVDGPTYIKRLKRGTEPGLYTLVSANARDIEDVDIEWAARYRFHLPADEWHRLRGAD
Sequences:
>Translated_227_residues MDAARQLILDRIADLGTDLKAVSLALGRNHAYLQQFISRGVPGELGERDRKKLAIILKVNDEHLRSRPVEHIDSMDVASL VDRSKKRKPDQEVRVVGYIGAGAEVHTVDDHEKGAGLDLVQVDFPVKHGTVGVIVRGDSMLPMFEDGDLIGYIRDASGPE QLIGKICVVKVVDGPTYIKRLKRGTEPGLYTLVSANARDIEDVDIEWAARYRFHLPADEWHRLRGAD >Mature_227_residues MDAARQLILDRIADLGTDLKAVSLALGRNHAYLQQFISRGVPGELGERDRKKLAIILKVNDEHLRSRPVEHIDSMDVASL VDRSKKRKPDQEVRVVGYIGAGAEVHTVDDHEKGAGLDLVQVDFPVKHGTVGVIVRGDSMLPMFEDGDLIGYIRDASGPE QLIGKICVVKVVDGPTYIKRLKRGTEPGLYTLVSANARDIEDVDIEWAARYRFHLPADEWHRLRGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25234; Mature: 25234
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAARQLILDRIADLGTDLKAVSLALGRNHAYLQQFISRGVPGELGERDRKKLAIILKVN CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC DEHLRSRPVEHIDSMDVASLVDRSKKRKPDQEVRVVGYIGAGAEVHTVDDHEKGAGLDLV HHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEE QVDFPVKHGTVGVIVRGDSMLPMFEDGDLIGYIRDASGPEQLIGKICVVKVVDGPTYIKR EEECCCCCCCEEEEEECCCCCCEECCCCEEEEEECCCCHHHHHCCEEEEEEECCHHHHHH LKRGTEPGLYTLVSANARDIEDVDIEWAARYRFHLPADEWHRLRGAD HHCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCHHHHHHHCCCC >Mature Secondary Structure MDAARQLILDRIADLGTDLKAVSLALGRNHAYLQQFISRGVPGELGERDRKKLAIILKVN CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEC DEHLRSRPVEHIDSMDVASLVDRSKKRKPDQEVRVVGYIGAGAEVHTVDDHEKGAGLDLV HHHHHHCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEE QVDFPVKHGTVGVIVRGDSMLPMFEDGDLIGYIRDASGPEQLIGKICVVKVVDGPTYIKR EEECCCCCCCEEEEEECCCCCCEECCCCEEEEEECCCCHHHHHCCEEEEEEECCHHHHHH LKRGTEPGLYTLVSANARDIEDVDIEWAARYRFHLPADEWHRLRGAD HHCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA