| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247606
Identifier: 154247606
GI number: 154247606
Start: 4088271
End: 4088900
Strand: Reverse
Name: 154247606
Synonym: Xaut_3679
Alternate gene names: NA
Gene position: 4088900-4088271 (Counterclockwise)
Preceding gene: 154247607
Following gene: 154247605
Centisome position: 77.02
GC content: 60.79
Gene sequence:
>630_bases ATGAGCCTAGAGATAATCGACGTTCCGCAGAACTCGCCTGAGTGGATGCAGGCCAGGGCCGGTATCCCGACCGCCAGCAT GTTCTCCACCGTCATGGCAAAAGGCAAGGGCGGCGGAGAAAGCGTCACGCGCCGGAAGTACATGCTTCAGTTGGCGGGCG AAATTTTGACCGGAGAGCCGGCAGAAACCTACAGCAACGCGCATATGGAGCGCGGGCACATCATGGAGCCAGAGGCGCGG AATTTCTATGCCTTCCAGCGCGATGTTGAGCCGGAATTGGTCGGCTTCATCCGCAATGGGCAGAAGGGGTGCAGCCCGGA CAGCCTCATCGGAACTGATGGCATGCTGGAGATCAAGACGAAGATCCCATCACTTCTGATCGAATGCTTGTTGAAGGATG AGTTCCCGAGCGAGCACGTCGCCCAATGCCAGGGCGCGCTATGGGTGGCCGAGCGCGAATGGCTGGACATCTGCGTCTAT TGGCCGAAGCTCCCGCCCTTCATCAAGCGCACCCATCGCGATGAACTCTACATCGCGGCCCTGTCCAAGGCCGTCTCCGA CTTCAACGCCGAGCTGCAGGAGGTGGTGGAGCAGATCCGCGCCTACGGCGGCGGGAAGGCCGCGGCATGA
Upstream 100 bases:
>100_bases TTGCAGACGGAGAGCCAGATACGGCCATAGCGGCCTCATTTGGAGTTCACCCAGGTGCCATTTGGTTCATCCGAAGCGGC AAGCACTGGAGCCATGTAGA
Downstream 100 bases:
>100_bases GCGACAAGCCCTCCATATGGCTGGTGCGCAAGGGTGAACTGCTCTTGCCCCGCGCCCGGTTCGATGCCGAAGCGCTCACC CGCTACAGGGAGGGCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Exonuclease; Phage-Type Endonuclease; Bacteriophage Exonuclease; Phage Related Protein; Exonuclease Phage-Type; Phage Related Exonuclease; Phage-Like Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSLEIIDVPQNSPEWMQARAGIPTASMFSTVMAKGKGGGESVTRRKYMLQLAGEILTGEPAETYSNAHMERGHIMEPEAR NFYAFQRDVEPELVGFIRNGQKGCSPDSLIGTDGMLEIKTKIPSLLIECLLKDEFPSEHVAQCQGALWVAEREWLDICVY WPKLPPFIKRTHRDELYIAALSKAVSDFNAELQEVVEQIRAYGGGKAAA
Sequences:
>Translated_209_residues MSLEIIDVPQNSPEWMQARAGIPTASMFSTVMAKGKGGGESVTRRKYMLQLAGEILTGEPAETYSNAHMERGHIMEPEAR NFYAFQRDVEPELVGFIRNGQKGCSPDSLIGTDGMLEIKTKIPSLLIECLLKDEFPSEHVAQCQGALWVAEREWLDICVY WPKLPPFIKRTHRDELYIAALSKAVSDFNAELQEVVEQIRAYGGGKAAA >Mature_208_residues SLEIIDVPQNSPEWMQARAGIPTASMFSTVMAKGKGGGESVTRRKYMLQLAGEILTGEPAETYSNAHMERGHIMEPEARN FYAFQRDVEPELVGFIRNGQKGCSPDSLIGTDGMLEIKTKIPSLLIECLLKDEFPSEHVAQCQGALWVAEREWLDICVYW PKLPPFIKRTHRDELYIAALSKAVSDFNAELQEVVEQIRAYGGGKAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23276; Mature: 23145
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEIIDVPQNSPEWMQARAGIPTASMFSTVMAKGKGGGESVTRRKYMLQLAGEILTGEP CCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC AETYSNAHMERGHIMEPEARNFYAFQRDVEPELVGFIRNGQKGCSPDSLIGTDGMLEIKT HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEHHH KIPSLLIECLLKDEFPSEHVAQCQGALWVAEREWLDICVYWPKLPPFIKRTHRDELYIAA HHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHCCCHHHHHH LSKAVSDFNAELQEVVEQIRAYGGGKAAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLEIIDVPQNSPEWMQARAGIPTASMFSTVMAKGKGGGESVTRRKYMLQLAGEILTGEP CEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC AETYSNAHMERGHIMEPEARNFYAFQRDVEPELVGFIRNGQKGCSPDSLIGTDGMLEIKT HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCCEEHHH KIPSLLIECLLKDEFPSEHVAQCQGALWVAEREWLDICVYWPKLPPFIKRTHRDELYIAA HHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHCCCHHHHHH LSKAVSDFNAELQEVVEQIRAYGGGKAAA HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA