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The map label for this gene is 154247535

Identifier: 154247535

GI number: 154247535

Start: 4029686

End: 4030078

Strand: Reverse

Name: 154247535

Synonym: Xaut_3608

Alternate gene names: NA

Gene position: 4030078-4029686 (Counterclockwise)

Preceding gene: 154247536

Following gene: 154247534

Centisome position: 75.91

GC content: 59.8

Gene sequence:

>393_bases
ATGCCCACATTGAAAGATAAGACCAAAGAACTCGATGTGGTGATTGGCTTTCGTGTGAAGCAATCCCGTCTGCGCAGCGG
CGTTAGCCAGGAAGCGCTCGGCGAACACCTCGGGATCACGTTTCAGCAGATCCAGAAATACGAGAACGGCAAAAACCGGA
TCGCCTGCAGCACGCTGGTGATGATCGCCGATTTTCTCAAGGTCTCGGCACTTTTTCTCCTCCGCGGCACGGAAAAAGAC
GCCGGGGCCTTGCCCCAAGCCCGCGACACCGCCTCTGTCGAGGCCGTTGACCTCCTCTCGCAGCTCCCCCCGCATTCCAA
AGCTGCGGCAATCAACACGATCCGTGCGCTTCACGAAGCAACGGCCGGCGCACCGAACGCCGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GGGCAGCGCTCGCATCCGCCGCGACGGCCAATGTCGCCGTCGACCTCTTCACCATGCCCAGCCGGTTCGCCGCTGCGGCT
TTCGCCCCTTGGAGCGCCTG

Downstream 100 bases:

>100_bases
TGCTCCGGTTCCTCCGCAGGCTGCGAAGGCCATGGGCCGCCATGGCGGTGTCCAGCCAGAACGAAGCGGCCTTCTCCGCG
CACCGCGCCCGGTACGACCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPTLKDKTKELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLVMIADFLKVSALFLLRGTEKD
AGALPQARDTASVEAVDLLSQLPPHSKAAAINTIRALHEATAGAPNAEAA

Sequences:

>Translated_130_residues
MPTLKDKTKELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLVMIADFLKVSALFLLRGTEKD
AGALPQARDTASVEAVDLLSQLPPHSKAAAINTIRALHEATAGAPNAEAA
>Mature_129_residues
PTLKDKTKELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLVMIADFLKVSALFLLRGTEKDA
GALPQARDTASVEAVDLLSQLPPHSKAAAINTIRALHEATAGAPNAEAA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 13951; Mature: 13820

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLKDKTKELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLV
CCCCCCCCCCEEEHCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH
MIADFLKVSALFLLRGTEKDAGALPQARDTASVEAVDLLSQLPPHSKAAAINTIRALHEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TAGAPNAEAA
HCCCCCCCCC
>Mature Secondary Structure 
PTLKDKTKELDVVIGFRVKQSRLRSGVSQEALGEHLGITFQQIQKYENGKNRIACSTLV
CCCCCCCCCEEEHCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH
MIADFLKVSALFLLRGTEKDAGALPQARDTASVEAVDLLSQLPPHSKAAAINTIRALHEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TAGAPNAEAA
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]