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The map label for this gene is crtB [H]

Identifier: 154247505

GI number: 154247505

Start: 4000915

End: 4001850

Strand: Direct

Name: crtB [H]

Synonym: Xaut_3578

Alternate gene names: 154247505

Gene position: 4000915-4001850 (Clockwise)

Preceding gene: 154247504

Following gene: 154247506

Centisome position: 75.36

GC content: 71.47

Gene sequence:

>936_bases
ATGAGCACGCCTGCGCCTACCGTCCTCGGTGCCAGCGAGGAGGCCATAAACAAGGGCTCCAAGAGCTTCGCCGCCGCCGC
GCGCCTGTTCGGCCCGCGCATGCGGGAAGACGCGGTGATGCTCTATGCCTGGTGCCGCCACTGCGACGACGTGGTGGACG
GGCAGGAACTGGGGCACGGGCGTGTCTCCAGCGCCGCCTCGCCCGCCGAGCGGCTCGATGGCCTCTATGAGGAGACCCGC
AACGCCTATCGCGGCGCGCCCTCCGCCCATCCGGCCTTCGCCGCCTTCGCCGAGGTGGTGAAGCGCAACGACATTCCCGA
GCGCTATCCCCTTCAACTGCTGGAGGGCTTCCGCATGGACGTGGAAGGCCGGCGCTACGACACCCTCGATGACACGCTCA
CCTATTGCTACCACGTGGCCGGCGTGGTGGGCGTGATGATGGCCCTCATCATGGGCGCGCGGGATGAAGTGGTGCTGGAC
CGGGCGAGCGACCTCGGCCTCGGCTTCCAGCTCACCAACATCGCCCGCGACGTGATGGAGGATGCCGCCATCGGCCGCAT
CTACCTGCCGGCGGCCTTCCTCGCAGAGGCCGGCGTGCCGGAGGCGGCCATCGCCGCGCCGGAGCACCGCGCGGCGGTGG
CCGGCGTGGTGGCGCGGCTGCTCGACGTGGCCGAGCCCTATTACGACCAGGCCCTCATCGGCATGGCCGCCCTGCCGTTC
CGCGCGGCGGCAGCGGTGGGCGCGGCGCGTGGGGTCTATCGCGCCATCGGCATCGAGGTCCGTAAGCGCGGGCCGAAGGC
GTGGGATACCCGCGTCTCCACCTCCACGGCCCAGAAGGCCGGCTTTCTCGCGGGTGGCCTCGCGCAGGCCCTCGCCACGC
GGTTCAGAGGCGCGCCGCCGCCCCGTCCCGCGCATCTTTGGACGCGTCCCGCATGA

Upstream 100 bases:

>100_bases
CCGGGGCCGGCACCCATCCGGGGGCGGGCGTGCCGGGGGTGGTGGGCTCGGCCAAGGCCACGGCGGGGCTCATCCTCGCG
GATCTGGGCGTGACGCCGCG

Downstream 100 bases:

>100_bases
CCCATTTCGCCGTCGTCGCCCCGCCGCTGCCGGGCCATATCAATCCGTTGCTGGTGCTCGCCCGGGAGCTTACCGCGCGC
GGCCATCGCGTCACCTTCGT

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSTPAPTVLGASEEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHGRVSSAASPAERLDGLYEETR
NAYRGAPSAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMDVEGRRYDTLDDTLTYCYHVAGVVGVMMALIMGARDEVVLD
RASDLGLGFQLTNIARDVMEDAAIGRIYLPAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPF
RAAAAVGAARGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLAGGLAQALATRFRGAPPPRPAHLWTRPA

Sequences:

>Translated_311_residues
MSTPAPTVLGASEEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHGRVSSAASPAERLDGLYEETR
NAYRGAPSAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMDVEGRRYDTLDDTLTYCYHVAGVVGVMMALIMGARDEVVLD
RASDLGLGFQLTNIARDVMEDAAIGRIYLPAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPF
RAAAAVGAARGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLAGGLAQALATRFRGAPPPRPAHLWTRPA
>Mature_310_residues
STPAPTVLGASEEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHGRVSSAASPAERLDGLYEETRN
AYRGAPSAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMDVEGRRYDTLDDTLTYCYHVAGVVGVMMALIMGARDEVVLDR
ASDLGLGFQLTNIARDVMEDAAIGRIYLPAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPFR
AAAAVGAARGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLAGGLAQALATRFRGAPPPRPAHLWTRPA

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33279; Mature: 33148

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPAPTVLGASEEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHG
CCCCCCCEECCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCC
RVSSAASPAERLDGLYEETRNAYRGAPSAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMD
CHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VEGRRYDTLDDTLTYCYHVAGVVGVMMALIMGARDEVVLDRASDLGLGFQLTNIARDVME
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
DAAIGRIYLPAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPF
HHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RAAAAVGAARGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLAGGLAQALATRFRGAPP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRPAHLWTRPA
CCCCCCCCCCC
>Mature Secondary Structure 
STPAPTVLGASEEAINKGSKSFAAAARLFGPRMREDAVMLYAWCRHCDDVVDGQELGHG
CCCCCCEECCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCC
RVSSAASPAERLDGLYEETRNAYRGAPSAHPAFAAFAEVVKRNDIPERYPLQLLEGFRMD
CHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
VEGRRYDTLDDTLTYCYHVAGVVGVMMALIMGARDEVVLDRASDLGLGFQLTNIARDVME
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
DAAIGRIYLPAAFLAEAGVPEAAIAAPEHRAAVAGVVARLLDVAEPYYDQALIGMAALPF
HHHCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RAAAAVGAARGVYRAIGIEVRKRGPKAWDTRVSTSTAQKAGFLAGGLAQALATRFRGAPP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRPAHLWTRPA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]