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The map label for this gene is crtI [H]

Identifier: 154247504

GI number: 154247504

Start: 3999404

End: 4000918

Strand: Direct

Name: crtI [H]

Synonym: Xaut_3577

Alternate gene names: 154247504

Gene position: 3999404-4000918 (Clockwise)

Preceding gene: 154247503

Following gene: 154247505

Centisome position: 75.33

GC content: 67.52

Gene sequence:

>1515_bases
ATGATGCTCGATGCCACCAAGACCATCCGCCGCGCCGCCGTCATCGGGTCCGGCTTCGGCGGGCTCTCCCTCGCCATCCG
CCTGCAGGCGGCGGGCATCCGCACCACCGTGTTCGAGCAGCGGGACAAGCCCGGCGGCCGCGCCTACGTCTATGAGCAGG
ACGGCTTCACCTTCGATGGCGGCCCCACCGTCATCACCGATCCCACCTGCCTGGAAGAAGTGTTCGCCGCCGCCGGCCGC
AAGCTGTCCGACTATGTGGAGCTGATGCCGGTCTCGCCGTTCTACCGGCTGCTGTGGCCGGACGGCCGGCAGTTCGACTA
TGTGAACGACCAGGCCGCGCTGGACGCCCAGATCGCCACCTTCGATAAGGCGGACGTGGAGGGCTATCGCCGCTTCCTCG
CCTATTCGCAGGCGGTCTTCGAGGAGGGTTATCTCAAGCTCGGCGCGGTGCCGTTCCTCGAATTCTCCAGCATGATGAAG
GCCGCGCCCAAGCTGGTGAGGCTGGAAGCCTGGCGCTCGGTCTATGCCATGGTCTCGCGCTTCATCCGCGACGATCACCT
GCGGCAGGCCTTCTCGTTCCATTCCCTGCTGGTGGGGGGCAATCCCTTCTCCACCTCGTCCATCTATGCCCTCATCCATG
CGCTGGAGCGCAAGTGGGGCGTGTTCTTCCCCCGCGGGGGAACCGGCGCCTTGGTGCGCGGCATGGTCAAGCTGTTCACC
GACCTCGGCGGCGAGATCCGCCTCACCAGCCCGGTGGACGAGATCGTGGTGGAGGGCCAGCGCGCCACCGCCGTGAAGCT
CAAGAGCGGCGAGACCCTGCCGTTCGACCTCGTCGCCTCCAATGCGGACGTGGTGCACACCTATCGCCACCTTCTGCGCG
GGGCGGCGCGCGGTCGCTCGGAAGGCGCGCGGCTGGCCAAGACGCGCCACTCCATGTCGCTGTTCGTCACCTATTTCGGG
GCGCGGCGCACCTGGGACCATCTCCAGCACCACACGGTGCTGTTCGGTCCGCGCTATCGGGGCCTCGTGGACGAGATCTT
CAAGGGCCCGAACCTTCCCGACGACTTCTCGCTCTATCTCCACGCGCCCACCGTGACAGACAAATCGCTGGCGCCGGAAG
GCTGTACCGCCTTCTACGTGCTCTCGCCGGTGCCGCATCTGGGCAAGGCGGACATCGACTGGGAGGTGGAAGGCCCGCTC
TATCGCGACCGCATCCTCGCCCATCTGGAAGAGCGGCTACTGCCGGGGCTGCGCGACAGCCTCGTCACCTCGCGCATCCT
CACCCCCTTCGGCTTCCGCGACGAACTGTCCGCCCATCAGGGCTCGGCCTTCTCGGTAGAACCGCTCCTCACCCAGTCAG
CGTGGTTCCGGCCGCACAACCGCGATGCCAAGATTGCCAACCTCTATTTCGCCGGGGCCGGCACCCATCCGGGGGCGGGC
GTGCCGGGGGTGGTGGGCTCGGCCAAGGCCACGGCGGGGCTCATCCTCGCGGATCTGGGCGTGACGCCGCGATGA

Upstream 100 bases:

>100_bases
CCCTTGCCGACAAGGCGCGCATCCTTTCGGGCCGCCCACCCGTATCGGTGTTCAGGGCGCTCTCCTGCCTTGTTGAGACG
AAAGCCGCACCCGGTTCCCC

Downstream 100 bases:

>100_bases
GCACGCCTGCGCCTACCGTCCTCGGTGCCAGCGAGGAGGCCATAAACAAGGGCTCCAAGAGCTTCGCCGCCGCCGCGCGC
CTGTTCGGCCCGCGCATGCG

Product: zeta-phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MMLDATKTIRRAAVIGSGFGGLSLAIRLQAAGIRTTVFEQRDKPGGRAYVYEQDGFTFDGGPTVITDPTCLEEVFAAAGR
KLSDYVELMPVSPFYRLLWPDGRQFDYVNDQAALDAQIATFDKADVEGYRRFLAYSQAVFEEGYLKLGAVPFLEFSSMMK
AAPKLVRLEAWRSVYAMVSRFIRDDHLRQAFSFHSLLVGGNPFSTSSIYALIHALERKWGVFFPRGGTGALVRGMVKLFT
DLGGEIRLTSPVDEIVVEGQRATAVKLKSGETLPFDLVASNADVVHTYRHLLRGAARGRSEGARLAKTRHSMSLFVTYFG
ARRTWDHLQHHTVLFGPRYRGLVDEIFKGPNLPDDFSLYLHAPTVTDKSLAPEGCTAFYVLSPVPHLGKADIDWEVEGPL
YRDRILAHLEERLLPGLRDSLVTSRILTPFGFRDELSAHQGSAFSVEPLLTQSAWFRPHNRDAKIANLYFAGAGTHPGAG
VPGVVGSAKATAGLILADLGVTPR

Sequences:

>Translated_504_residues
MMLDATKTIRRAAVIGSGFGGLSLAIRLQAAGIRTTVFEQRDKPGGRAYVYEQDGFTFDGGPTVITDPTCLEEVFAAAGR
KLSDYVELMPVSPFYRLLWPDGRQFDYVNDQAALDAQIATFDKADVEGYRRFLAYSQAVFEEGYLKLGAVPFLEFSSMMK
AAPKLVRLEAWRSVYAMVSRFIRDDHLRQAFSFHSLLVGGNPFSTSSIYALIHALERKWGVFFPRGGTGALVRGMVKLFT
DLGGEIRLTSPVDEIVVEGQRATAVKLKSGETLPFDLVASNADVVHTYRHLLRGAARGRSEGARLAKTRHSMSLFVTYFG
ARRTWDHLQHHTVLFGPRYRGLVDEIFKGPNLPDDFSLYLHAPTVTDKSLAPEGCTAFYVLSPVPHLGKADIDWEVEGPL
YRDRILAHLEERLLPGLRDSLVTSRILTPFGFRDELSAHQGSAFSVEPLLTQSAWFRPHNRDAKIANLYFAGAGTHPGAG
VPGVVGSAKATAGLILADLGVTPR
>Mature_504_residues
MMLDATKTIRRAAVIGSGFGGLSLAIRLQAAGIRTTVFEQRDKPGGRAYVYEQDGFTFDGGPTVITDPTCLEEVFAAAGR
KLSDYVELMPVSPFYRLLWPDGRQFDYVNDQAALDAQIATFDKADVEGYRRFLAYSQAVFEEGYLKLGAVPFLEFSSMMK
AAPKLVRLEAWRSVYAMVSRFIRDDHLRQAFSFHSLLVGGNPFSTSSIYALIHALERKWGVFFPRGGTGALVRGMVKLFT
DLGGEIRLTSPVDEIVVEGQRATAVKLKSGETLPFDLVASNADVVHTYRHLLRGAARGRSEGARLAKTRHSMSLFVTYFG
ARRTWDHLQHHTVLFGPRYRGLVDEIFKGPNLPDDFSLYLHAPTVTDKSLAPEGCTAFYVLSPVPHLGKADIDWEVEGPL
YRDRILAHLEERLLPGLRDSLVTSRILTPFGFRDELSAHQGSAFSVEPLLTQSAWFRPHNRDAKIANLYFAGAGTHPGAG
VPGVVGSAKATAGLILADLGVTPR

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55557; Mature: 55557

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLDATKTIRRAAVIGSGFGGLSLAIRLQAAGIRTTVFEQRDKPGGRAYVYEQDGFTFDG
CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCEEECC
GPTVITDPTCLEEVFAAAGRKLSDYVELMPVSPFYRLLWPDGRQFDYVNDQAALDAQIAT
CCEEEECHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHCHHHHH
FDKADVEGYRRFLAYSQAVFEEGYLKLGAVPFLEFSSMMKAAPKLVRLEAWRSVYAMVSR
CCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRDDHLRQAFSFHSLLVGGNPFSTSSIYALIHALERKWGVFFPRGGTGALVRGMVKLFT
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHH
DLGGEIRLTSPVDEIVVEGQRATAVKLKSGETLPFDLVASNADVVHTYRHLLRGAARGRS
HCCCCEEECCCHHHHHCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
EGARLAKTRHSMSLFVTYFGARRTWDHLQHHTVLFGPRYRGLVDEIFKGPNLPDDFSLYL
CCHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCEEEE
HAPTVTDKSLAPEGCTAFYVLSPVPHLGKADIDWEVEGPLYRDRILAHLEERLLPGLRDS
ECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHH
LVTSRILTPFGFRDELSAHQGSAFSVEPLLTQSAWFRPHNRDAKIANLYFAGAGTHPGAG
HHHHHHCCCCCCHHHHHCCCCCCEEECHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
VPGVVGSAKATAGLILADLGVTPR
CCCCCCCCHHHHCEEEEECCCCCC
>Mature Secondary Structure
MMLDATKTIRRAAVIGSGFGGLSLAIRLQAAGIRTTVFEQRDKPGGRAYVYEQDGFTFDG
CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEEEEECCCEEECC
GPTVITDPTCLEEVFAAAGRKLSDYVELMPVSPFYRLLWPDGRQFDYVNDQAALDAQIAT
CCEEEECHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHCHHHHH
FDKADVEGYRRFLAYSQAVFEEGYLKLGAVPFLEFSSMMKAAPKLVRLEAWRSVYAMVSR
CCHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRDDHLRQAFSFHSLLVGGNPFSTSSIYALIHALERKWGVFFPRGGTGALVRGMVKLFT
HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHH
DLGGEIRLTSPVDEIVVEGQRATAVKLKSGETLPFDLVASNADVVHTYRHLLRGAARGRS
HCCCCEEECCCHHHHHCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC
EGARLAKTRHSMSLFVTYFGARRTWDHLQHHTVLFGPRYRGLVDEIFKGPNLPDDFSLYL
CCHHHHHHHHHHEEEEEECCCHHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCCCCEEEE
HAPTVTDKSLAPEGCTAFYVLSPVPHLGKADIDWEVEGPLYRDRILAHLEERLLPGLRDS
ECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHH
LVTSRILTPFGFRDELSAHQGSAFSVEPLLTQSAWFRPHNRDAKIANLYFAGAGTHPGAG
HHHHHHCCCCCCHHHHHCCCCCCEEECHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
VPGVVGSAKATAGLILADLGVTPR
CCCCCCCCHHHHCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]