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The map label for this gene is crtY [H]

Identifier: 154247503

GI number: 154247503

Start: 3998250

End: 3999407

Strand: Direct

Name: crtY [H]

Synonym: Xaut_3576

Alternate gene names: 154247503

Gene position: 3998250-3999407 (Clockwise)

Preceding gene: 154247501

Following gene: 154247504

Centisome position: 75.31

GC content: 68.05

Gene sequence:

>1158_bases
ATGGACATCGTCTTCGTCGGCGCCGGACTTGCCAATTGCCTTATGGCGGCGCGCCTCGCGGCCCAGCGTCCCGGCCTTCA
CATGCTGCTGCTGGAAGCCGGCGAGAGCGTGGGCGGCAATCACAGCTGGTCCTGCCACGACAGCGATCTCACTGCCGCGC
AGCGCGCCTTCCTCGCTCCCTTCCAGAGCTATCTCTGGGCCGGGCACGGGGTGCATTTTCCCGCTTTTTCGCGCACGCTC
AAAGGCGGCTACGCCACCATTTCCTCCGAGCGCATGGCCGAGGTGATGAATGAGCGCCTGTGCGCCGCCATCCGCACCAA
TGCCCGCGTCGCCCATGTGGCGCCCGACCACGTGGTGCTGGAGGGCGGCGAGCGCATCGACGCCCGCGCCGTGGTGGACG
GGCGCGGCCCACTCGCCTCGCGCCATCTCGACCTCGGCTACCAGACCTTCCTGGGGCAGGAACTGCGTATGTCTCGGCCC
CATGGCCTCACCCGCCCCATCATCATGGATGCGCGGGTGGAGCAGCTGGGCGGTTACCGCTTCGTCTATGTGCTGCCGCT
GGACGATGACACGCTGCTGGTGGAAGACACCTATTATGCCGACGGCCCGGATCTTCCCGCCGATGCCTTGCGCGGCCGCA
TTTCCGCCTATGCCGCGGCGCAGGGCTGGGCCGTGGATTATGTGGTGCGGGAGGAGGACGGCATCTTGCCGATAGCGTTG
GGCGGCGACATCAACGCCTTTCTTGCCGAGACGCCTTCGGGCGTCGCGCCCGCCGGACTGCGGGCAGGCCTGTTCCACCC
CACCACCGGCTACAGCCTGCCCGACGCCATGGCCCTGGCCGACTCGGTGAGCGCGCTTGCCGACCTTTCCGGCCCCGCGC
TTTCGGCGGCAGTGCGCAGCCATGCGGCGGCGGCGTGGAACGGGCGCGGCTTCTTCCGCCTGCTCAACCGCATGCTGTTC
CGCGCTGCCGATCCGGAGCGGCGCTATGCCATTCTCCAGCGCTTCTACGGGCTGTCGGAAGACCTGATCGCCCGTTTCTA
CGCCGATCGCCTCACCCTTGCCGACAAGGCGCGCATCCTTTCGGGCCGCCCACCCGTATCGGTGTTCAGGGCGCTCTCCT
GCCTTGTTGAGACGAAAGCCGCACCCGGTTCCCCATGA

Upstream 100 bases:

>100_bases
GCAGATTGGGGGACGAGCGGGAATCCGGCGCGGGGGTGACAGGCGACAGCCCGGCGGCTATTGCCCTTGCGGGGGCAACG
GCAGGAGCAGCGCTTAGGGC

Downstream 100 bases:

>100_bases
TGCTCGATGCCACCAAGACCATCCGCCGCGCCGCCGTCATCGGGTCCGGCTTCGGCGGGCTCTCCCTCGCCATCCGCCTG
CAGGCGGCGGGCATCCGCAC

Product: lycopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MDIVFVGAGLANCLMAARLAAQRPGLHMLLLEAGESVGGNHSWSCHDSDLTAAQRAFLAPFQSYLWAGHGVHFPAFSRTL
KGGYATISSERMAEVMNERLCAAIRTNARVAHVAPDHVVLEGGERIDARAVVDGRGPLASRHLDLGYQTFLGQELRMSRP
HGLTRPIIMDARVEQLGGYRFVYVLPLDDDTLLVEDTYYADGPDLPADALRGRISAYAAAQGWAVDYVVREEDGILPIAL
GGDINAFLAETPSGVAPAGLRAGLFHPTTGYSLPDAMALADSVSALADLSGPALSAAVRSHAAAAWNGRGFFRLLNRMLF
RAADPERRYAILQRFYGLSEDLIARFYADRLTLADKARILSGRPPVSVFRALSCLVETKAAPGSP

Sequences:

>Translated_385_residues
MDIVFVGAGLANCLMAARLAAQRPGLHMLLLEAGESVGGNHSWSCHDSDLTAAQRAFLAPFQSYLWAGHGVHFPAFSRTL
KGGYATISSERMAEVMNERLCAAIRTNARVAHVAPDHVVLEGGERIDARAVVDGRGPLASRHLDLGYQTFLGQELRMSRP
HGLTRPIIMDARVEQLGGYRFVYVLPLDDDTLLVEDTYYADGPDLPADALRGRISAYAAAQGWAVDYVVREEDGILPIAL
GGDINAFLAETPSGVAPAGLRAGLFHPTTGYSLPDAMALADSVSALADLSGPALSAAVRSHAAAAWNGRGFFRLLNRMLF
RAADPERRYAILQRFYGLSEDLIARFYADRLTLADKARILSGRPPVSVFRALSCLVETKAAPGSP
>Mature_385_residues
MDIVFVGAGLANCLMAARLAAQRPGLHMLLLEAGESVGGNHSWSCHDSDLTAAQRAFLAPFQSYLWAGHGVHFPAFSRTL
KGGYATISSERMAEVMNERLCAAIRTNARVAHVAPDHVVLEGGERIDARAVVDGRGPLASRHLDLGYQTFLGQELRMSRP
HGLTRPIIMDARVEQLGGYRFVYVLPLDDDTLLVEDTYYADGPDLPADALRGRISAYAAAQGWAVDYVVREEDGILPIAL
GGDINAFLAETPSGVAPAGLRAGLFHPTTGYSLPDAMALADSVSALADLSGPALSAAVRSHAAAAWNGRGFFRLLNRMLF
RAADPERRYAILQRFYGLSEDLIARFYADRLTLADKARILSGRPPVSVFRALSCLVETKAAPGSP

Specific function: Catalyzes the cyclization reaction which converts lycopene to beta-carotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008461
- InterPro:   IPR010108
- InterPro:   IPR008671 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 41443; Mature: 41443

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVFVGAGLANCLMAARLAAQRPGLHMLLLEAGESVGGNHSWSCHDSDLTAAQRAFLAP
CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
FQSYLWAGHGVHFPAFSRTLKGGYATISSERMAEVMNERLCAAIRTNARVAHVAPDHVVL
HHHHHHCCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE
EGGERIDARAVVDGRGPLASRHLDLGYQTFLGQELRMSRPHGLTRPIIMDARVEQLGGYR
CCCCEECCEEEECCCCCCCHHHHCCCHHHHHCHHHHCCCCCCCCCCEEEHHHHHHHCCEE
FVYVLPLDDDTLLVEDTYYADGPDLPADALRGRISAYAAAQGWAVDYVVREEDGILPIAL
EEEEEECCCCEEEEEECEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE
GGDINAFLAETPSGVAPAGLRAGLFHPTTGYSLPDAMALADSVSALADLSGPALSAAVRS
CCCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
HAAAAWNGRGFFRLLNRMLFRAADPERRYAILQRFYGLSEDLIARFYADRLTLADKARIL
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SGRPPVSVFRALSCLVETKAAPGSP
CCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIVFVGAGLANCLMAARLAAQRPGLHMLLLEAGESVGGNHSWSCHDSDLTAAQRAFLAP
CCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
FQSYLWAGHGVHFPAFSRTLKGGYATISSERMAEVMNERLCAAIRTNARVAHVAPDHVVL
HHHHHHCCCCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEE
EGGERIDARAVVDGRGPLASRHLDLGYQTFLGQELRMSRPHGLTRPIIMDARVEQLGGYR
CCCCEECCEEEECCCCCCCHHHHCCCHHHHHCHHHHCCCCCCCCCCEEEHHHHHHHCCEE
FVYVLPLDDDTLLVEDTYYADGPDLPADALRGRISAYAAAQGWAVDYVVREEDGILPIAL
EEEEEECCCCEEEEEECEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE
GGDINAFLAETPSGVAPAGLRAGLFHPTTGYSLPDAMALADSVSALADLSGPALSAAVRS
CCCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
HAAAAWNGRGFFRLLNRMLFRAADPERRYAILQRFYGLSEDLIARFYADRLTLADKARIL
HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SGRPPVSVFRALSCLVETKAAPGSP
CCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8422926; 7808389 [H]