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The map label for this gene is rfbU [H]

Identifier: 154247486

GI number: 154247486

Start: 3973939

End: 3975081

Strand: Direct

Name: rfbU [H]

Synonym: Xaut_3559

Alternate gene names: 154247486

Gene position: 3973939-3975081 (Clockwise)

Preceding gene: 154247485

Following gene: 154247487

Centisome position: 74.85

GC content: 60.63

Gene sequence:

>1143_bases
ATGACACAGCTTGACGTTACGGTGCCGTTGTTTGCAATTCATCATCACAAGATTGGTGGAACGGAATCGGCGGTCTACAA
TCTGGTGCACGGCCTGGCGCGAACCGACGCGCGGCTCACCATCGCCTTTGCCGAGGCCGGACGCTTTTCGCCTGAGTTCC
AGCAGTGGATGGTGGACAATCCGCACGTCGCCCAGGCGATCCTGCCGGCTATTCGTGGCTCGAAGAACACCCGCTTTCTC
GAGGAAACGCTTTTCGAGCTGAAGCGTGGCAAAGAGGGATGGGTCGTTTACCCAAACTATTTCCTGCCGCCGCGTCTGGG
TTCAAGAAAATCTGCCGTTATTCTTCATGATATCCAGTACAAGGTTCTGCCGCAGTACCACAGCGCCAAGCGCAAGGCCT
GGTTGAACTTTTACCTGAAGGGGCTGTTCAAGCGGGCTGACGTGGTCCTGTCCATCTCGAATTCCGAGAAAAACCTGGTC
GCTGAGCATTTCGGCGCCGAGGCGGCGAGCCGCTGCCAGGTCATTTATAACGCCATCGACTGGCATCGCTTCGAGGGCGG
GCCGATCAGCCAGCGCATCGTCGATCTGGCGCAGCGCCCCTATATCCTTACGGTCAGTCATCCTTTCCCGCACAAGAACA
TCTCGACGCTCATCAAGGCCTTCAACGCCATCAGCCAGACGGACAAGGAGATCCGCCTGTACCTGGTGGGCAAGGACTCC
CCCGAGCGGCGTCAGCTGATCACCGAGAACGCGGATCCGGCGGCTGTGGACCGCATCGAGCTGACCGGCGTGGTCAGCGA
TGCGGAACTGGGCGAGCTGTACCGTCGGGCGCGGGTGTTTGCCCTGCCGTCCCTCTACGAAGGGTTCGGGATGCCGGCCG
TGGAAGCCATGGGCCTCGGTGTGCCGACGGTCGCCAGCGGCGTGACCTCGCTGCCCGAGGTGACGCTGGGCCAGGCCAGC
TATGTCGACGATCCGTTGAGTGTCGGCGGCTGGATCGACGCCATATCGGCCCTTCTTGAGCGCGGAGGGCGTGTCGCTCC
CGAAGTGGTCGAGCAGATTCGCCAGAAATATGAACCCAAACACGTTGCGGAAAACCTGCTCGACGTTTTGGCGTCGGCAG
ACGCCGCTGGAACATCAAGGTGA

Upstream 100 bases:

>100_bases
AGAAGGAGGCTGCATTGTCGTCGCAGCCGCTGATCATCGATTTTGATGGTGATGCTGTGGTCAAGATCGAAATCTCGATT
TAGCTAGGAGCCGTTCGATC

Downstream 100 bases:

>100_bases
TGAACATGGATCGCGCCGTCGTCGTCATCCCAACCTACAATGCCAGTCGTCATTTGGGAGACCTGCTGCCTGCGCTGCAG
CAGCAGGGGCTGCGTCCGGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTQLDVTVPLFAIHHHKIGGTESAVYNLVHGLARTDARLTIAFAEAGRFSPEFQQWMVDNPHVAQAILPAIRGSKNTRFL
EETLFELKRGKEGWVVYPNYFLPPRLGSRKSAVILHDIQYKVLPQYHSAKRKAWLNFYLKGLFKRADVVLSISNSEKNLV
AEHFGAEAASRCQVIYNAIDWHRFEGGPISQRIVDLAQRPYILTVSHPFPHKNISTLIKAFNAISQTDKEIRLYLVGKDS
PERRQLITENADPAAVDRIELTGVVSDAELGELYRRARVFALPSLYEGFGMPAVEAMGLGVPTVASGVTSLPEVTLGQAS
YVDDPLSVGGWIDAISALLERGGRVAPEVVEQIRQKYEPKHVAENLLDVLASADAAGTSR

Sequences:

>Translated_380_residues
MTQLDVTVPLFAIHHHKIGGTESAVYNLVHGLARTDARLTIAFAEAGRFSPEFQQWMVDNPHVAQAILPAIRGSKNTRFL
EETLFELKRGKEGWVVYPNYFLPPRLGSRKSAVILHDIQYKVLPQYHSAKRKAWLNFYLKGLFKRADVVLSISNSEKNLV
AEHFGAEAASRCQVIYNAIDWHRFEGGPISQRIVDLAQRPYILTVSHPFPHKNISTLIKAFNAISQTDKEIRLYLVGKDS
PERRQLITENADPAAVDRIELTGVVSDAELGELYRRARVFALPSLYEGFGMPAVEAMGLGVPTVASGVTSLPEVTLGQAS
YVDDPLSVGGWIDAISALLERGGRVAPEVVEQIRQKYEPKHVAENLLDVLASADAAGTSR
>Mature_379_residues
TQLDVTVPLFAIHHHKIGGTESAVYNLVHGLARTDARLTIAFAEAGRFSPEFQQWMVDNPHVAQAILPAIRGSKNTRFLE
ETLFELKRGKEGWVVYPNYFLPPRLGSRKSAVILHDIQYKVLPQYHSAKRKAWLNFYLKGLFKRADVVLSISNSEKNLVA
EHFGAEAASRCQVIYNAIDWHRFEGGPISQRIVDLAQRPYILTVSHPFPHKNISTLIKAFNAISQTDKEIRLYLVGKDSP
ERRQLITENADPAAVDRIELTGVVSDAELGELYRRARVFALPSLYEGFGMPAVEAMGLGVPTVASGVTSLPEVTLGQASY
VDDPLSVGGWIDAISALLERGGRVAPEVVEQIRQKYEPKHVAENLLDVLASADAAGTSR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42118; Mature: 41986

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLDVTVPLFAIHHHKIGGTESAVYNLVHGLARTDARLTIAFAEAGRFSPEFQQWMVDN
CCCEEEEEHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCC
PHVAQAILPAIRGSKNTRFLEETLFELKRGKEGWVVYPNYFLPPRLGSRKSAVILHDIQY
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECHH
KVLPQYHSAKRKAWLNFYLKGLFKRADVVLSISNSEKNLVAEHFGAEAASRCQVIYNAID
HCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHH
WHRFEGGPISQRIVDLAQRPYILTVSHPFPHKNISTLIKAFNAISQTDKEIRLYLVGKDS
HHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCC
PERRQLITENADPAAVDRIELTGVVSDAELGELYRRARVFALPSLYEGFGMPAVEAMGLG
HHHHHHHCCCCCCCHHCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCC
VPTVASGVTSLPEVTLGQASYVDDPLSVGGWIDAISALLERGGRVAPEVVEQIRQKYEPK
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
HVAENLLDVLASADAAGTSR
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQLDVTVPLFAIHHHKIGGTESAVYNLVHGLARTDARLTIAFAEAGRFSPEFQQWMVDN
CCEEEEEHEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHCCCC
PHVAQAILPAIRGSKNTRFLEETLFELKRGKEGWVVYPNYFLPPRLGSRKSAVILHDIQY
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECHH
KVLPQYHSAKRKAWLNFYLKGLFKRADVVLSISNSEKNLVAEHFGAEAASRCQVIYNAID
HCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHH
WHRFEGGPISQRIVDLAQRPYILTVSHPFPHKNISTLIKAFNAISQTDKEIRLYLVGKDS
HHCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCC
PERRQLITENADPAAVDRIELTGVVSDAELGELYRRARVFALPSLYEGFGMPAVEAMGLG
HHHHHHHCCCCCCCHHCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCC
VPTVASGVTSLPEVTLGQASYVDDPLSVGGWIDAISALLERGGRVAPEVVEQIRQKYEPK
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
HVAENLLDVLASADAAGTSR
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]