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The map label for this gene is fdhD [H]

Identifier: 154247406

GI number: 154247406

Start: 3871257

End: 3872135

Strand: Reverse

Name: fdhD [H]

Synonym: Xaut_3478

Alternate gene names: 154247406

Gene position: 3872135-3871257 (Counterclockwise)

Preceding gene: 154247407

Following gene: 154247405

Centisome position: 72.94

GC content: 71.67

Gene sequence:

>879_bases
ATGACCGACACCGCCTCCACCTGCGCGCTGACGCAGGACACCGCCCTCCCCGCCCCGCCCCCGGCGCGGCGGGTGGAGCG
CGTGCAGGTGCGGGACGGCGCGGTTTCCACGGGAGAGCGGGCGGTGCCCGAGGAAGTGCCGGTCGCCCTCACCTTCAACG
GCACCACCCATGCGGTGATGATGGCGAGCCCGACCGACATCGCCGACTTCGCCCTTGGCTTCGCCCTCACCGAGGGCATC
GTCGCCTCGCCTGCCGAGATCCTGTCCCGCGAGGTGATCGTGGTGGACGAGGGCATCGAGGCCCGCATGTGGATCGCCGA
AGAGAAGATGAAGCATCTCTCCGCCCGGCGCCGGGCGCTGGCCGGGCCCACCGGCTGTGGCCTGTGCGGGGTGGAGAGCC
TTGCCGAGGCGGTGAAGCCGGCGGCGCTGGTGACGGCGGACACCCACTTCTCCCCGGCGACGCTGCTCGACGCCATGGCC
GCACTCGGCCCGCTCCAGAGCCTCAACCATGAGACCCGCGCGGTGCATGCGGCGGCCTATTTCGAGCCCGGCCGCGGCAT
CCTCGCCCTGGCCGAGGACGTGGGCCGGCACAATGCCCTCGACAAGCTGGTGGGCAAGGCGGCGGAGGCCGGCTTCGATG
CCGCGCGCGGCCTGCTGCTGCTGACCAGCCGCGTCTCCATCGAGATGGTTCAGAAGGCGGCGGTGCTGGGCGTGGGCGTC
ATTGCAGCCGTCTCGGCGCCGACATCGCTCGCCATCCGCACCGCCGACGCGGCGGGCATCACCCTGTGCGCCATCGTGCG
GCAGGATGGCTTCGAGATCTTCACCCATCCCGGGCGCATCGCCCTCCCCTCACCGGAACGGCAGAACCATGTCGCATAG

Upstream 100 bases:

>100_bases
AAGGGGCGCTTCAGTTCAAACCGTCATGGCCGGGCCTGACGACTAAGGCAGCTGACATCCCTTCCGGAACCCGCTCTCCG
CTCCCATGTGAAAACTTGAA

Downstream 100 bases:

>100_bases
CACTGCTGAAAAGCTCGTCTACATGGCGAACCAGATCGCCACCGCCTTCTCGGCGCAGAAGCACGCGGAGGCCGTGGAGG
CCACGCGCATCCACATCCAG

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTDTASTCALTQDTALPAPPPARRVERVQVRDGAVSTGERAVPEEVPVALTFNGTTHAVMMASPTDIADFALGFALTEGI
VASPAEILSREVIVVDEGIEARMWIAEEKMKHLSARRRALAGPTGCGLCGVESLAEAVKPAALVTADTHFSPATLLDAMA
ALGPLQSLNHETRAVHAAAYFEPGRGILALAEDVGRHNALDKLVGKAAEAGFDAARGLLLLTSRVSIEMVQKAAVLGVGV
IAAVSAPTSLAIRTADAAGITLCAIVRQDGFEIFTHPGRIALPSPERQNHVA

Sequences:

>Translated_292_residues
MTDTASTCALTQDTALPAPPPARRVERVQVRDGAVSTGERAVPEEVPVALTFNGTTHAVMMASPTDIADFALGFALTEGI
VASPAEILSREVIVVDEGIEARMWIAEEKMKHLSARRRALAGPTGCGLCGVESLAEAVKPAALVTADTHFSPATLLDAMA
ALGPLQSLNHETRAVHAAAYFEPGRGILALAEDVGRHNALDKLVGKAAEAGFDAARGLLLLTSRVSIEMVQKAAVLGVGV
IAAVSAPTSLAIRTADAAGITLCAIVRQDGFEIFTHPGRIALPSPERQNHVA
>Mature_291_residues
TDTASTCALTQDTALPAPPPARRVERVQVRDGAVSTGERAVPEEVPVALTFNGTTHAVMMASPTDIADFALGFALTEGIV
ASPAEILSREVIVVDEGIEARMWIAEEKMKHLSARRRALAGPTGCGLCGVESLAEAVKPAALVTADTHFSPATLLDAMAA
LGPLQSLNHETRAVHAAAYFEPGRGILALAEDVGRHNALDKLVGKAAEAGFDAARGLLLLTSRVSIEMVQKAAVLGVGVI
AAVSAPTSLAIRTADAAGITLCAIVRQDGFEIFTHPGRIALPSPERQNHVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=43.3333333333333, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30359; Mature: 30228

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTASTCALTQDTALPAPPPARRVERVQVRDGAVSTGERAVPEEVPVALTFNGTTHAVM
CCCCCCCEEEECCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE
MASPTDIADFALGFALTEGIVASPAEILSREVIVVDEGIEARMWIAEEKMKHLSARRRAL
EECCCCHHHHHHHHHHHHCHHCCCHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHH
AGPTGCGLCGVESLAEAVKPAALVTADTHFSPATLLDAMAALGPLQSLNHETRAVHAAAY
CCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEE
FEPGRGILALAEDVGRHNALDKLVGKAAEAGFDAARGLLLLTSRVSIEMVQKAAVLGVGV
ECCCCCEEHHHHHHCCHHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHH
IAAVSAPTSLAIRTADAAGITLCAIVRQDGFEIFTHPGRIALPSPERQNHVA
HHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TDTASTCALTQDTALPAPPPARRVERVQVRDGAVSTGERAVPEEVPVALTFNGTTHAVM
CCCCCCEEEECCCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEE
MASPTDIADFALGFALTEGIVASPAEILSREVIVVDEGIEARMWIAEEKMKHLSARRRAL
EECCCCHHHHHHHHHHHHCHHCCCHHHHCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHH
AGPTGCGLCGVESLAEAVKPAALVTADTHFSPATLLDAMAALGPLQSLNHETRAVHAAAY
CCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEEE
FEPGRGILALAEDVGRHNALDKLVGKAAEAGFDAARGLLLLTSRVSIEMVQKAAVLGVGV
ECCCCCEEHHHHHHCCHHHHHHHHHHHHHCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHH
IAAVSAPTSLAIRTADAAGITLCAIVRQDGFEIFTHPGRIALPSPERQNHVA
HHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]