| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is imuB [H]
Identifier: 154247397
GI number: 154247397
Start: 3862451
End: 3863893
Strand: Reverse
Name: imuB [H]
Synonym: Xaut_3469
Alternate gene names: 154247397
Gene position: 3863893-3862451 (Counterclockwise)
Preceding gene: 154247398
Following gene: 154247396
Centisome position: 72.78
GC content: 75.95
Gene sequence:
>1443_bases GTGGTGCACACCCTCGCCAACGCCCGCCGCCTCCAGGCGGTGGACGCGGCGGCGGCGCGCCTCGGCCTCCATCCGGGGCT GACCTTGGCGGATGCGCAGGCTCGCGTGCCGGACCTTCAGGCGGTGGAGGCGGACCCGGCGGCGGACGGCGCGCTGCTGG CCGCCATCGCCTGCTGGTGCGAGCGCTGGACGCCGTTCGTGGCGCTCGCGCCGCCTCATGGCATCGTGCTCGATATCACC GGCTGCGCCCATCTATTTGCCGGCGAGAAGGCCATGCTCGCCGCCATGGTGGCGCGCCTCACCGCCCAGGGCTTCGCCGT CCAGGGCGCGGTGGCCGGAACCGCGCGCGCGGCACTGGCGCTCGCCCGCTGGCGCCCCGGCCTCGTGGCCGCGCCGGGGA CGGAGGGGGAGGCCGTGGCCGGCCTGCCGGTGGCGGCGCTGGAGCTGGATCCGGAGGCCGAGCGCAGCCTCGCCTATCTC GGCCTTGCCACCATCGGCGACCTTTCGGGCAAGCCCCGGGCCGCGCTCGCCGCCCGCTTCGGCAGCCGGATCGTCAGCCG GCTGGAGGAGATCACCGGCGCCGCCGACGCCCCCATCTCCCCCCTCAATCCCCTGCCCGTCTACGTGGCCGAACGGCGCT TCGCCGAGCCCATGGGAGATGAGGACACCGCCCGCGCCGTGATCGCCGACCTCGCCCGCGAGCTAGCTGGCGTGCTGGAG CGGCACGGGGAAGGCGGGCGGCGCTTTGCGGCGGCCTTCTTCCGCAGCGACGGCGCCGTGCGGCGGGTGGAGGCGGGCAC CGCCGCCCCTTTGCGCGATGCCGCGCGCCTCGCCGGCCTGTTCCGCGAGCGGCTCGCGGCGCTGGCCGATCCGCTGGATC CCGGCTTCGGCTATGACGTGATCCGCCTGTCGGTCACCGCCTGCGAGCAGCTTACCGCCACCCAGGCCGCCTTCGGCGTG CCGCCTGAGGAAGCCGCCCTGTCGGAGCTGGTGGACGTGCTGTCCGCCCGCCTCGGCCCGCGGCGGGTGATGTGCCTTCA GCCGCAGGACAGCCATGTGCCCGAGCGGGCGGCGGCGCGCGTGCCGGCGCAGAAGGGCTGGGCCGTGGCGGGCCTCGCCG CCTGGCCCGCAGCGGCGGCGGAGGGCGCGCCCCTGCCCCGCCCGCCGGCCCTGTTCGCCCATCCCGAGCCGGTGGAGACG CTGGCCGAGGTGCCGGACGGCCCGCCGCTCCGCTTCCGCTGGCGGCGCATGCTGCACGAGGTGGTGCGCGCCGAGGGGCC GGAGCGCATCGCCGCCGAATGGTGGACCGGGTCGGAAGCGCTGACCCGCGATTATTTCCGCGTGGAGGACAAGGAAGGCC GCCGTTTCTGGCTCTATCGCGCCGGCACCTACGGGCGGGAGACATCGGAGCCGCGCTGGTTCCTGCACGGGCTGTTCCCG TGA
Upstream 100 bases:
>100_bases CACCGACCGGCTGCATCGCAAGGCCCGGCACGCGCGGACGGCCCGGCCCCCGTGGTCGTCGGCTCCTTCGAGCGCCGCGC CGGATGAGGCGCCTCTCGCG
Downstream 100 bases:
>100_bases GCACGTCGCCCATGACCACGCCTGCCATGAACGCCATCGCCCCGGCGCCGGCCTATGCGGAGCTTTGCGCCGCCTCCCAT TTCTCCTTCCTGCGCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MVHTLANARRLQAVDAAAARLGLHPGLTLADAQARVPDLQAVEADPAADGALLAAIACWCERWTPFVALAPPHGIVLDIT GCAHLFAGEKAMLAAMVARLTAQGFAVQGAVAGTARAALALARWRPGLVAAPGTEGEAVAGLPVAALELDPEAERSLAYL GLATIGDLSGKPRAALAARFGSRIVSRLEEITGAADAPISPLNPLPVYVAERRFAEPMGDEDTARAVIADLARELAGVLE RHGEGGRRFAAAFFRSDGAVRRVEAGTAAPLRDAARLAGLFRERLAALADPLDPGFGYDVIRLSVTACEQLTATQAAFGV PPEEAALSELVDVLSARLGPRRVMCLQPQDSHVPERAAARVPAQKGWAVAGLAAWPAAAAEGAPLPRPPALFAHPEPVET LAEVPDGPPLRFRWRRMLHEVVRAEGPERIAAEWWTGSEALTRDYFRVEDKEGRRFWLYRAGTYGRETSEPRWFLHGLFP
Sequences:
>Translated_480_residues MVHTLANARRLQAVDAAAARLGLHPGLTLADAQARVPDLQAVEADPAADGALLAAIACWCERWTPFVALAPPHGIVLDIT GCAHLFAGEKAMLAAMVARLTAQGFAVQGAVAGTARAALALARWRPGLVAAPGTEGEAVAGLPVAALELDPEAERSLAYL GLATIGDLSGKPRAALAARFGSRIVSRLEEITGAADAPISPLNPLPVYVAERRFAEPMGDEDTARAVIADLARELAGVLE RHGEGGRRFAAAFFRSDGAVRRVEAGTAAPLRDAARLAGLFRERLAALADPLDPGFGYDVIRLSVTACEQLTATQAAFGV PPEEAALSELVDVLSARLGPRRVMCLQPQDSHVPERAAARVPAQKGWAVAGLAAWPAAAAEGAPLPRPPALFAHPEPVET LAEVPDGPPLRFRWRRMLHEVVRAEGPERIAAEWWTGSEALTRDYFRVEDKEGRRFWLYRAGTYGRETSEPRWFLHGLFP >Mature_480_residues MVHTLANARRLQAVDAAAARLGLHPGLTLADAQARVPDLQAVEADPAADGALLAAIACWCERWTPFVALAPPHGIVLDIT GCAHLFAGEKAMLAAMVARLTAQGFAVQGAVAGTARAALALARWRPGLVAAPGTEGEAVAGLPVAALELDPEAERSLAYL GLATIGDLSGKPRAALAARFGSRIVSRLEEITGAADAPISPLNPLPVYVAERRFAEPMGDEDTARAVIADLARELAGVLE RHGEGGRRFAAAFFRSDGAVRRVEAGTAAPLRDAARLAGLFRERLAALADPLDPGFGYDVIRLSVTACEQLTATQAAFGV PPEEAALSELVDVLSARLGPRRVMCLQPQDSHVPERAAARVPAQKGWAVAGLAAWPAAAAEGAPLPRPPALFAHPEPVET LAEVPDGPPLRFRWRRMLHEVVRAEGPERIAAEWWTGSEALTRDYFRVEDKEGRRFWLYRAGTYGRETSEPRWFLHGLFP
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 51087; Mature: 51087
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHTLANARRLQAVDAAAARLGLHPGLTLADAQARVPDLQAVEADPAADGALLAAIACWC CCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHH ERWTPFVALAPPHGIVLDITGCAHLFAGEKAMLAAMVARLTAQGFAVQGAVAGTARAALA HHCCCEEEECCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH LARWRPGLVAAPGTEGEAVAGLPVAALELDPEAERSLAYLGLATIGDLSGKPRAALAARF HHHCCCCEEECCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GSRIVSRLEEITGAADAPISPLNPLPVYVAERRFAEPMGDEDTARAVIADLARELAGVLE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RHGEGGRRFAAAFFRSDGAVRRVEAGTAAPLRDAARLAGLFRERLAALADPLDPGFGYDV HCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE IRLSVTACEQLTATQAAFGVPPEEAALSELVDVLSARLGPRRVMCLQPQDSHVPERAAAR EHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHC VPAQKGWAVAGLAAWPAAAAEGAPLPRPPALFAHPEPVETLAEVPDGPPLRFRWRRMLHE CCCCCCCEEEEHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH VVRAEGPERIAAEWWTGSEALTRDYFRVEDKEGRRFWLYRAGTYGRETSEPRWFLHGLFP HHHCCCCCHHHHHHCCCCHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCC >Mature Secondary Structure MVHTLANARRLQAVDAAAARLGLHPGLTLADAQARVPDLQAVEADPAADGALLAAIACWC CCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHH ERWTPFVALAPPHGIVLDITGCAHLFAGEKAMLAAMVARLTAQGFAVQGAVAGTARAALA HHCCCEEEECCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHH LARWRPGLVAAPGTEGEAVAGLPVAALELDPEAERSLAYLGLATIGDLSGKPRAALAARF HHHCCCCEEECCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GSRIVSRLEEITGAADAPISPLNPLPVYVAERRFAEPMGDEDTARAVIADLARELAGVLE HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RHGEGGRRFAAAFFRSDGAVRRVEAGTAAPLRDAARLAGLFRERLAALADPLDPGFGYDV HCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE IRLSVTACEQLTATQAAFGVPPEEAALSELVDVLSARLGPRRVMCLQPQDSHVPERAAAR EHEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHC VPAQKGWAVAGLAAWPAAAAEGAPLPRPPALFAHPEPVETLAEVPDGPPLRFRWRRMLHE CCCCCCCEEEEHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHH VVRAEGPERIAAEWWTGSEALTRDYFRVEDKEGRRFWLYRAGTYGRETSEPRWFLHGLFP HHHCCCCCHHHHHHCCCCHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA