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The map label for this gene is ssuC [H]

Identifier: 154247392

GI number: 154247392

Start: 3855139

End: 3856023

Strand: Direct

Name: ssuC [H]

Synonym: Xaut_3464

Alternate gene names: 154247392

Gene position: 3855139-3856023 (Clockwise)

Preceding gene: 154247391

Following gene: 154247393

Centisome position: 72.62

GC content: 69.49

Gene sequence:

>885_bases
GTGAGCCAAGCCGACCACACCGCAATTCTCGCCCTGCCGGGCCTCGCCTCAAGGGAGCCCGCGGCGTCCTCCGCGCCCGT
GCGCGGCCCCCGCGTGTTCGCACCTCGCGTCTTCGGACCGCGCGCTCTGCTGGCTTTGTCCTGGCTGGCGCCGCTGCTGT
TGGTGCTGGTGTGGGAAATCCTCGCCCAGACCGGCTATGTCACCCCGCAGGTGCTGCCGGCACCCAGCAAGGTGGTGCGC
ACGGCGTGGCGGCTCGCCACCACCGGATCGCTGCTGACCGATCTCGGCACCAGCCTGCTGCGCGCGGCGGTGGGCTTCGT
CCTCGGCGGCAGCATCGCTTTCGGGCTGGGCATTCTGGTGGGCTTCTCGCGCCTGGCCGAGGCTCTCATCGACCGCAGCG
TGCAGATGGTGCGGGCCATTCCCTTCCTCGCGCTGCTGCCCTTGGTCATCGTGTGGTTCGGCGTGGGTGAGGGGCAGAAG
ATCTTCCTGGTGGCGCTGGGCGTGGCCTTTCCCATCTACATCAACACCACGCTCGGCATCCGGCAGGTGGACGGCAAGCT
CCTGGAACTGGGCCGGGTGCAGGGCCTGTCCACAGCGCAGATGATCACTCGCATCATCCTGCCGGGGGCCTTGCCCTCCA
TCCTCACCGGGGTGCGTTATGCGCTGGCCACCGCATGGCTGGCGCTGGTGGTGGCCGAGACCATCGGCGCCCAGGCCGGC
ATCGGCTTCCTCGCCATGGACGCGCGCGAATTCCTGCGCACCGACGTGGTGGTGCTCACCATCGTCATCTACGCGCTCAT
CGGCGTGGCGGCGGATTCCCTCGCCCGGCTGCTGGAGCGGCGGCTTCTGGCCTGGCACCCCAATTTCGGCGGAGCGGCCC
GATGA

Upstream 100 bases:

>100_bases
GAGGTGTTCCCGCGCCTCGGCCGCGCCGCGCCGTCGCGCGTGGACCTGCGCCAGTCGCAGGCCGGCTGAGCTCTCTCCTT
TCCTTCGCCCCGAGGTCATC

Downstream 100 bases:

>100_bases
CCGCCGCCCTTCAGGACGTACCTGCCCAGGACGCCCCCGCGGCGGTGCGTGTCTCCGGCCTGCGCCGGGCCTATGGGCAG
CGCGTGGTCATCGACCGGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSQADHTAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEILAQTGYVTPQVLPAPSKVVR
TAWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILVGFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQK
IFLVALGVAFPIYINTTLGIRQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIGAQAG
IGFLAMDAREFLRTDVVVLTIVIYALIGVAADSLARLLERRLLAWHPNFGGAAR

Sequences:

>Translated_294_residues
MSQADHTAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEILAQTGYVTPQVLPAPSKVVR
TAWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILVGFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQK
IFLVALGVAFPIYINTTLGIRQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIGAQAG
IGFLAMDAREFLRTDVVVLTIVIYALIGVAADSLARLLERRLLAWHPNFGGAAR
>Mature_293_residues
SQADHTAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEILAQTGYVTPQVLPAPSKVVRT
AWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILVGFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQKI
FLVALGVAFPIYINTTLGIRQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIGAQAGI
GFLAMDAREFLRTDVVVLTIVIYALIGVAADSLARLLERRLLAWHPNFGGAAR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=242, Percent_Identity=52.4793388429752, Blast_Score=234, Evalue=5e-63,
Organism=Escherichia coli, GI1786564, Length=241, Percent_Identity=36.0995850622407, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31109; Mature: 30977

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQADHTAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEI
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAQTGYVTPQVLPAPSKVVRTAWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILV
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQKIFLVALGVAFPIYINTTLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCH
RQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIGAQAG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGFLAMDAREFLRTDVVVLTIVIYALIGVAADSLARLLERRLLAWHPNFGGAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SQADHTAILALPGLASREPAASSAPVRGPRVFAPRVFGPRALLALSWLAPLLLVLVWEI
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAQTGYVTPQVLPAPSKVVRTAWRLATTGSLLTDLGTSLLRAAVGFVLGGSIAFGLGILV
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFSRLAEALIDRSVQMVRAIPFLALLPLVIVWFGVGEGQKIFLVALGVAFPIYINTTLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCH
RQVDGKLLELGRVQGLSTAQMITRIILPGALPSILTGVRYALATAWLALVVAETIGAQAG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGFLAMDAREFLRTDVVVLTIVIYALIGVAADSLARLLERRLLAWHPNFGGAAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]