| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ssuD [H]
Identifier: 154247391
GI number: 154247391
Start: 3854022
End: 3855107
Strand: Direct
Name: ssuD [H]
Synonym: Xaut_3463
Alternate gene names: 154247391
Gene position: 3854022-3855107 (Clockwise)
Preceding gene: 154247390
Following gene: 154247392
Centisome position: 72.6
GC content: 69.52
Gene sequence:
>1086_bases ATGTCCGTTCCTCCCCTCCGTATCGGCGTCTGGGCGCCTGTCCACGGGCCGCGCGCGGCGCTGCAGGATCCGGCCGAGCC GTTCAATGCATCGTGGGAGCACAATCGCGACACCGTGCTTCAGGCCGAGGCGCTGGGATATGACGCGACGCTGGTGGCCC AGCACACGGTGAACCCGCACCTGCCGGACCACGACCAGCTTGAGGCCTGGACCGCCTCCGCCGCGCTGGCGGCGCTCACC AGCCGCATCGAGATCATCGCCGCCATCAAACCCTATCTCTACCACCCGGTGGTGCTGGCGAAGATGGCGCTGCAGATCGA GAACATCTCGCGCGGGCGGTTCGCCTTCAATCTCGTCAATGCGTGGAACCGCGCGGAATTTGAGAAGGCCGGCATCCCCT TCGGCGAGCACGACGAACGCTATGCCTATGGCCGCGAGTGGATCACCGTGGTGGAGAAGCTCATCCGCGGCGAGAGCGTG ACCCACACCGGCGAGAACTTCGCCCTCACCGATTATCAGCTGACCCCGAAGGACCTCCACCGCGCCCGCCCGCGCATCTA TCTCGGCGGGGAATCCGAGCCCGCCCGCGCGCTGGCGGCGGATGCGGCGGACGTGTTCTTCATCAACGGCCAGCCGCTGG AGGACGTGACCACCTTCATCGCCGACCTGAGGCGCCGCCCGCGCACGCTTGCGCCTTTGTCGTTCGGCCTTGCCGCCTTC GTCATCGCTCGCGACACCGAGCGGGAGGCGCGGGAGGAATACCAGCGGCTCGCGGCGCTGGCCGCCCGGGATGCGGGCGT GCGCGCCGCCCAGGCCGCCCGCACCGATCCCAACGTGGTCATGGTGAAGACCTTCGCCAAGTCGGAGCGCGTGGGCACCA ATGGCGGCACGGCGGCGGGGCTGGTGGGCAGCTACGACCAGGTGGCCGAGCGCATCCGCGCCTTCCATGCCGCCGGCATC GAATTGTTCATGCTGCAGTTCCAGCCGCTCACCGTCGAGCTTGCCCGCTTCGCGCGGGAGGTGTTCCCGCGCCTCGGCCG CGCCGCGCCGTCGCGCGTGGACCTGCGCCAGTCGCAGGCCGGCTGA
Upstream 100 bases:
>100_bases GGCGCTGGTGGCCTTCCTGAAGGCGCTGTAACGCCGATGCGGCTTGACAATCACATTATATCGATCTTTTTTATCAAAAT AATTGACTAAAGGGTAAGCC
Downstream 100 bases:
>100_bases GCTCTCTCCTTTCCTTCGCCCCGAGGTCATCGTGAGCCAAGCCGACCACACCGCAATTCTCGCCCTGCCGGGCCTCGCCT CAAGGGAGCCCGCGGCGTCC
Product: alkanesulfonate monooxygenase
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSVPPLRIGVWAPVHGPRAALQDPAEPFNASWEHNRDTVLQAEALGYDATLVAQHTVNPHLPDHDQLEAWTASAALAALT SRIEIIAAIKPYLYHPVVLAKMALQIENISRGRFAFNLVNAWNRAEFEKAGIPFGEHDERYAYGREWITVVEKLIRGESV THTGENFALTDYQLTPKDLHRARPRIYLGGESEPARALAADAADVFFINGQPLEDVTTFIADLRRRPRTLAPLSFGLAAF VIARDTEREAREEYQRLAALAARDAGVRAAQAARTDPNVVMVKTFAKSERVGTNGGTAAGLVGSYDQVAERIRAFHAAGI ELFMLQFQPLTVELARFAREVFPRLGRAAPSRVDLRQSQAG
Sequences:
>Translated_361_residues MSVPPLRIGVWAPVHGPRAALQDPAEPFNASWEHNRDTVLQAEALGYDATLVAQHTVNPHLPDHDQLEAWTASAALAALT SRIEIIAAIKPYLYHPVVLAKMALQIENISRGRFAFNLVNAWNRAEFEKAGIPFGEHDERYAYGREWITVVEKLIRGESV THTGENFALTDYQLTPKDLHRARPRIYLGGESEPARALAADAADVFFINGQPLEDVTTFIADLRRRPRTLAPLSFGLAAF VIARDTEREAREEYQRLAALAARDAGVRAAQAARTDPNVVMVKTFAKSERVGTNGGTAAGLVGSYDQVAERIRAFHAAGI ELFMLQFQPLTVELARFAREVFPRLGRAAPSRVDLRQSQAG >Mature_360_residues SVPPLRIGVWAPVHGPRAALQDPAEPFNASWEHNRDTVLQAEALGYDATLVAQHTVNPHLPDHDQLEAWTASAALAALTS RIEIIAAIKPYLYHPVVLAKMALQIENISRGRFAFNLVNAWNRAEFEKAGIPFGEHDERYAYGREWITVVEKLIRGESVT HTGENFALTDYQLTPKDLHRARPRIYLGGESEPARALAADAADVFFINGQPLEDVTTFIADLRRRPRTLAPLSFGLAAFV IARDTEREAREEYQRLAALAARDAGVRAAQAARTDPNVVMVKTFAKSERVGTNGGTAAGLVGSYDQVAERIRAFHAAGIE LFMLQFQPLTVELARFAREVFPRLGRAAPSRVDLRQSQAG
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=327, Percent_Identity=29.3577981651376, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1787247, Length=357, Percent_Identity=27.1708683473389, Blast_Score=106, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 39864; Mature: 39732
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPPLRIGVWAPVHGPRAALQDPAEPFNASWEHNRDTVLQAEALGYDATLVAQHTVNPH CCCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEECCCCCC LPDHDQLEAWTASAALAALTSRIEIIAAIKPYLYHPVVLAKMALQIENISRGRFAFNLVN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHH AWNRAEFEKAGIPFGEHDERYAYGREWITVVEKLIRGESVTHTGENFALTDYQLTPKDLH HHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCHHHHH RARPRIYLGGESEPARALAADAADVFFINGQPLEDVTTFIADLRRRPRTLAPLSFGLAAF HCCCEEEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH VIARDTEREAREEYQRLAALAARDAGVRAAQAARTDPNVVMVKTFAKSERVGTNGGTAAG HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHH LVGSYDQVAERIRAFHAAGIELFMLQFQPLTVELARFAREVFPRLGRAAPSRVDLRQSQA HCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHCCC G C >Mature Secondary Structure SVPPLRIGVWAPVHGPRAALQDPAEPFNASWEHNRDTVLQAEALGYDATLVAQHTVNPH CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEECCCCCC LPDHDQLEAWTASAALAALTSRIEIIAAIKPYLYHPVVLAKMALQIENISRGRFAFNLVN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHH AWNRAEFEKAGIPFGEHDERYAYGREWITVVEKLIRGESVTHTGENFALTDYQLTPKDLH HHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCHHHHH RARPRIYLGGESEPARALAADAADVFFINGQPLEDVTTFIADLRRRPRTLAPLSFGLAAF HCCCEEEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH VIARDTEREAREEYQRLAALAARDAGVRAAQAARTDPNVVMVKTFAKSERVGTNGGTAAG HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHH LVGSYDQVAERIRAFHAAGIELFMLQFQPLTVELARFAREVFPRLGRAAPSRVDLRQSQA HCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHCCHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA