| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247383
Identifier: 154247383
GI number: 154247383
Start: 3846181
End: 3847224
Strand: Reverse
Name: 154247383
Synonym: Xaut_3455
Alternate gene names: NA
Gene position: 3847224-3846181 (Counterclockwise)
Preceding gene: 154247384
Following gene: 154247382
Centisome position: 72.47
GC content: 65.61
Gene sequence:
>1044_bases ATGACTACCCTCAAGTTCTCGCGCGGCATGTTCTCGCGCCGCTCCTTCACGCGTCTCGCCGCCGCCGGCGTGGTGCTGTC CGCCGCCTTCGCCGCCGTACCGGCGCGGGCGGAAGGCGTGCTGCGCATCGCCCAGCAGTTCGGCACCCTCTACACGCCCT TCCACGTGCTGCGCGAGAAGGGCCTCATCGAGAAGCACGGCAAGGCGCTGGGCATCGACATCAAGGTGGAATGGATCCGC CTGTCCGGTGGCGGTGCGGTGAATGATGCGCTGCTCTCCGGCAGCATCGACATCGCCTCCGCCGGCATCGGGCCGTTCCT CACCATCTGGGACAAGACCCGCGGCACGGCGCAGGAGGTGAAGATCGTCGGCGCGTTCGGGGCGCAGCCCAACTTCCTGC TCACCAACAACCCGAACGTGAAGACCATCAAGGACTTCACCGAGAAGGACAAGATCGCGACGCCGGCGGCCGGCGTGTCG GTGCAGGCGCGCATCCTCCAGATGGCGGCGGAACAGGCCTTCGGCCCCGGCAAGGCCAAGGCGCTCGACCCGCTGATGGT CACCCTGCCCCACCCGGACGCCACCGCCGCGCTGATCGCCGGCGGCACCGAGATCACCTCCCACCTGTCCAACCCGCCGT TCCAGAACCAGGCGCTGAAGGACCCCAAGGTCCACAAGGTGTTCTCCTCCTACGACATCCTCGGCGGCCCGGCGACGCCC ACCGTGGCCTACACCACGGTGAAGTTCCGCCAGGAAAATCCCAAGACCTACAAGGCCTTCCAGGACGCCTTCGCCGAGGC CACCAAATGGGTGGAGGACAATAAGAAGGAAGCGGCGGAGATCTACGTGAAGGTGGAGCAGTCCAAGCTTGATCCCGCCT TCATCGCCGAAGTCCTGTCGGATCCCGAGGTGAGCTACACGCTGGTGCCCCTCGGCACGGTGAAGTTCGCGGATTTCATG AACCGGATCGGCGCCATCAAGAACAAGCCCACCAGCTGGAAGGAATTTACCTTCGAAGAGCTGCACGCGGCCTCCGGCAG CTGA
Upstream 100 bases:
>100_bases GCCGCAAGGTATCCGACAATATTGTCAATGAGTTCGCCGTGGGCTCCCACCTCGCGGAGCGGCGTCGCGCCGCCGTGTCC TGAGCCCCGAGGAGATCAAG
Downstream 100 bases:
>100_bases GGGCACGACCATGACCGTCGCCGTCGCACGTCTTGAAGTCCCCCCGCATCTCCAGCCCGCGCCGCACCCGGCACAGGCTG GGGTTCAGGCCATCCCCGTC
Product: putative ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NMT1/THI5 Like Domain Protein; NLPA Lipoprotein; Transporter Periplasmic Component; Nlpa Lipoprotein; ABC-Type Transporter Periplasmic; Periplasmic Protein
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTTLKFSRGMFSRRSFTRLAAAGVVLSAAFAAVPARAEGVLRIAQQFGTLYTPFHVLREKGLIEKHGKALGIDIKVEWIR LSGGGAVNDALLSGSIDIASAGIGPFLTIWDKTRGTAQEVKIVGAFGAQPNFLLTNNPNVKTIKDFTEKDKIATPAAGVS VQARILQMAAEQAFGPGKAKALDPLMVTLPHPDATAALIAGGTEITSHLSNPPFQNQALKDPKVHKVFSSYDILGGPATP TVAYTTVKFRQENPKTYKAFQDAFAEATKWVEDNKKEAAEIYVKVEQSKLDPAFIAEVLSDPEVSYTLVPLGTVKFADFM NRIGAIKNKPTSWKEFTFEELHAASGS
Sequences:
>Translated_347_residues MTTLKFSRGMFSRRSFTRLAAAGVVLSAAFAAVPARAEGVLRIAQQFGTLYTPFHVLREKGLIEKHGKALGIDIKVEWIR LSGGGAVNDALLSGSIDIASAGIGPFLTIWDKTRGTAQEVKIVGAFGAQPNFLLTNNPNVKTIKDFTEKDKIATPAAGVS VQARILQMAAEQAFGPGKAKALDPLMVTLPHPDATAALIAGGTEITSHLSNPPFQNQALKDPKVHKVFSSYDILGGPATP TVAYTTVKFRQENPKTYKAFQDAFAEATKWVEDNKKEAAEIYVKVEQSKLDPAFIAEVLSDPEVSYTLVPLGTVKFADFM NRIGAIKNKPTSWKEFTFEELHAASGS >Mature_346_residues TTLKFSRGMFSRRSFTRLAAAGVVLSAAFAAVPARAEGVLRIAQQFGTLYTPFHVLREKGLIEKHGKALGIDIKVEWIRL SGGGAVNDALLSGSIDIASAGIGPFLTIWDKTRGTAQEVKIVGAFGAQPNFLLTNNPNVKTIKDFTEKDKIATPAAGVSV QARILQMAAEQAFGPGKAKALDPLMVTLPHPDATAALIAGGTEITSHLSNPPFQNQALKDPKVHKVFSSYDILGGPATPT VAYTTVKFRQENPKTYKAFQDAFAEATKWVEDNKKEAAEIYVKVEQSKLDPAFIAEVLSDPEVSYTLVPLGTVKFADFMN RIGAIKNKPTSWKEFTFEELHAASGS
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37423; Mature: 37292
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLKFSRGMFSRRSFTRLAAAGVVLSAAFAAVPARAEGVLRIAQQFGTLYTPFHVLREK CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHC GLIEKHGKALGIDIKVEWIRLSGGGAVNDALLSGSIDIASAGIGPFLTIWDKTRGTAQEV CCHHHCCCEEEEEEEEEEEEEECCCCCCHHHHCCCCEEECCCCCCEEEEECCCCCCHHHE KIVGAFGAQPNFLLTNNPNVKTIKDFTEKDKIATPAAGVSVQARILQMAAEQAFGPGKAK EEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC ALDPLMVTLPHPDATAALIAGGTEITSHLSNPPFQNQALKDPKVHKVFSSYDILGGPATP CCCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC TVAYTTVKFRQENPKTYKAFQDAFAEATKWVEDNKKEAAEIYVKVEQSKLDPAFIAEVLS EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHC DPEVSYTLVPLGTVKFADFMNRIGAIKNKPTSWKEFTFEELHAASGS CCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TTLKFSRGMFSRRSFTRLAAAGVVLSAAFAAVPARAEGVLRIAQQFGTLYTPFHVLREK CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHC GLIEKHGKALGIDIKVEWIRLSGGGAVNDALLSGSIDIASAGIGPFLTIWDKTRGTAQEV CCHHHCCCEEEEEEEEEEEEEECCCCCCHHHHCCCCEEECCCCCCEEEEECCCCCCHHHE KIVGAFGAQPNFLLTNNPNVKTIKDFTEKDKIATPAAGVSVQARILQMAAEQAFGPGKAK EEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC ALDPLMVTLPHPDATAALIAGGTEITSHLSNPPFQNQALKDPKVHKVFSSYDILGGPATP CCCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC TVAYTTVKFRQENPKTYKAFQDAFAEATKWVEDNKKEAAEIYVKVEQSKLDPAFIAEVLS EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHC DPEVSYTLVPLGTVKFADFMNRIGAIKNKPTSWKEFTFEELHAASGS CCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA