Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154247347

Identifier: 154247347

GI number: 154247347

Start: 3809678

End: 3810742

Strand: Direct

Name: 154247347

Synonym: Xaut_3419

Alternate gene names: NA

Gene position: 3809678-3810742 (Clockwise)

Preceding gene: 154247346

Following gene: 154247348

Centisome position: 71.76

GC content: 66.76

Gene sequence:

>1065_bases
ATGAGCGCCGACCTGTCATTGACCGGGCGCAAGCCGCCCCGGGAGGCATCTCCCCTCGTCTGGGCGGCGGCAACGGTCGC
GGCTATCGCCCTCTGGTTCGTGGTCTACGCCCAGCTCGCGCCGTTCTCCCAATGGTTGGTGGCCCGCCTGCCGGTGGAGC
CGGGCAGCCATCTTGCCGAAGCGGTGGCATTCTTCGTCTACGACACGCCCAAGGTGCTGATGCTGCTGACCCTGGTGGTG
TTCGCCATGGGCGTGGTGCGCAGCTTCTTCTCGGCCGAGCGCACCCGTGCGCTGCTCGCCGGAAAGCGCGAGGGGCTCGG
CAATATCGCGGCCGCTGGCCTCGGCATCGTCACGCCTTTCTGCTCCTGCTCGGCGGTGCCGCTGTTCGTCGGCTTTGTCT
CCGCCGGCGTGCCCCTCGGCGTTACGTTTTCCTTCCTCATCGCCGCGCCCATGGTCAATGAGGTGGCGCTGGGTCTGCTG
TTCGCGCTCGTGGGCTGGAAGGTGGCGCTCACCTATCTGGCCTTCGGCCTCGCTGTGGCCATCGTCGCCGGCTGGGTCAT
TGGCCGGCTGCACCTGGAAGGCTGGCTGGAAGACTGGGTGCGCAATGTGCGCGCCGCTCCGGTCGAGCTGCCGCCAAACG
GCATGACGCTGGTGGATCGCATCAGGGCGGGCCTCGACGCGGTGCGCGACATCGTCGGCAAGGTCTGGATGTGGATCATC
GCCGGCATCGCCGCGGGCGCCTTCATCCACGGCTTCGTGCCGGCGGATCTGCTCGCCTCCATCATGGGGCGGGATGCGTG
GTGGTCGGTTCCGGCGGCGGTCCTGTTGGGCATTCCCATGTATTCCAATGCCGCAGGCATCATCCCGGTGGTGGAAGCTC
TGCTGGCCAAGGGCGCTGCGCTGGGCACCGTGCTCGCCTTCATGATGGCAGTCATCGCCCTGTCGCTGCCGGAAATGATC
ATCCTGCGCAAAGTGTTGAGCCTGAAGCTGATCGCCGTGTTCATCGGTGTGGTTGGCGCCGGCATCCTCGCCGTGGGCTT
CCTGTTCAACGCGCTGTTTTCCTGA

Upstream 100 bases:

>100_bases
GGGTGCGGTACCGTCGTAATCCCGAATTGCCGGCCGAGCAGGCGGCGATCATCAATGCAGTCCTCATCAGTCTCGACGCG
ACATCGAACAGGAGAGCCGC

Downstream 100 bases:

>100_bases
AACAAAAAGGCACAAGCCATGAAGGACGTGAAGGTGCTCGGCCCCGGCTGCTCCCGCTGCGAGGCCACGGCGCAGATGGT
GCGGGATGAGGCGGCCAAGC

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Integral Membrane Protein

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVV
FAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL
FALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII
AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI
ILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS

Sequences:

>Translated_354_residues
MSADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVV
FAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL
FALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII
AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI
ILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS
>Mature_353_residues
SADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVVF
AMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLF
ALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWIIA
GIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMII
LRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37301; Mature: 37170

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH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HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA