| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247338
Identifier: 154247338
GI number: 154247338
Start: 3799922
End: 3802267
Strand: Direct
Name: 154247338
Synonym: Xaut_3410
Alternate gene names: NA
Gene position: 3799922-3802267 (Clockwise)
Preceding gene: 154247337
Following gene: 154247346
Centisome position: 71.58
GC content: 69.57
Gene sequence:
>2346_bases ATGTCCTTCCGCCGGTTGATTGGCGCCTGTGTCTCAGCGCTCGCTGCCGGCATCCTTTCCGCCGGGGTGATCGCGCTGGC AGCCGAATTCTCCTCGCAGCGCCCGGGACAGGCGCTCGGGCCCGGCGGGATCGGCGCGTTGACAGACCAGGCGCCAACGG GCTTCGTCGGCTCCGCAGCCTGCGCGGACTGCCATGGGGCACAAACCCGCGCCTGGCTCTCCTCCCAGCATGCCCATGCC ATGGCCCGCGCCGAACCGCAGACGGTGCTTGGCAATTTCGACGACGCCCGCGTCTCGCACCAGGGCAGTTCGGCGCGCTT CTTCCGCGACGGATCGCGCTACATGGTCGAGACCGAGGGCGCCGACGGCAAGTCCGCCGCGTTCGAGATCACCGATACGT TCGGCGTCCACCCTCTGCAGCAGTATCTCGTGACCTTTCCGGACGGGCGCCGCCAGGCACTGCCGTTCGCCTATGACACC CAGCCGGCCGCCGAGGGCGGACAACGCTGGTTTCATCTTTATCCGGACCAGATGATCGCATCCACGGACATCCTGCACTG GACCGGGTTGCAGCAGAACTGGAACTTCATGTGCGCCGAATGTCACTCGACGGCGCTCCGCAAGAATTATGATCCGGCTG CGAACCGCTTCGACACGCGCTTCTCCGAGATCAGCGTCGGCTGCGAGGCCTGTCACGGTCCGGCAGGGCGCCATGTGGAA TGGGCCCGGGGCCCTCGCGACCGCGAGGCGCCGAACAAGGGCTTTGCCTCGGTTGCCGCCCTTCGCCCGCCGGCGGACTG GACCATCGACCCGGCCACCGGCAGCCCGGCCCACGGCGTGTCACGGCCTGCAGGCGATGTCGTGGAGACTTGCGCCCGCT GCCATGCCCGTCGCAGCATCCTCTCGGAGGACTGGCGCCCCGGCCAGCCCCTGACGCAGACCCACCTGCCGACCTTCCTG TCCGAAGGCCTGTTCGAGGCGGACGGCACCATGCGGGATGAGGTCTTCAACGACCATTCCTTCAAGCAGAGCCTGATGTA TGCCCGGGGTGTCACCTGCGGCGACTGCCACGAGCCGCATTCGGCCGCCCTGCGTGCGCCAGGCAGCGCGGTCTGCGCCC AATGCCACCTGCCGGAAAAGTTCGCGTCCGAGGCACACACGGGCCACGCGCCGGGACCGAAGGCTCCGGATTGCATCTCC TGCCACATGCCGGCGCGCACCTACATGGTGGTGGACAAGAGGCACGACCACTCCTTCCGCATTCCCCGCCCCGATGTTTC GGCGCAGCTCGGCATGCCGAACGCCTGCAACGACTGCCACAAGGACCAGTCGGCGAATTGGGCGGCCGAGGCCATCGCGC GCTGGCATGGGCCCGAGCGCAAGGGCTTCCAGGATTGGGCCGCGGCGCTCCACGACGCGCGCGGCGGCGATCCCGCGGCC CGCGAGGCGCTGATCCGGCTCGCCACGACGCCGGCGACGCCCGCCATCGTTCGCGCCACGGCGGTGAACGAGCTGCGGGG CTTCCCCTCCATCGCGACCGACGCTGCGATGCAGAAGGCGCTGTCCGATCCCGATCCGCTGGTGCGCATCGCTGCCGTGG AGAGCGCCGCCGGACTGCCCCTCGAGACGCGCTGGCGGCGGCTCGCGCCGCTGCTGATCGATCCGGTTGCCGGCGTCCGC ATCGAGGCGGCGAACCAGCTTGCGGACCAGCCGCTGGCGGCGCTTTCAGCCGCCGACCGGGACCGGCTCAGCACAGCGTT CAGGGAATATGAGGCGGCGCAGCGCCTCAACGCGGACCGGCCGGAGGCGCGCTCCAATCTGGGCGGTTTTCTGCTGCGCC GTGGCGACGTGGCGGGGGCCGAGGCCCAGTACCGCGCCGGCCTGAAGCTTCAGCCGGACTTGCCGGCGCTCGCGGTCAAT CTCGCCGATCTCTACCGCCTGACGGGCCGCGAGCGCGAGGCGCAGGATGTCCTGGAGCGGGCGATCAAGGCCAATCCCGA TGCAGCGGCGCCAAGGCATGCGCTGGGGCTCGCGCTCATCCGCCAGAAGCGCTATGGCGAGGCCCTGAACGAGCTGAAGC GCGCCTATGAGCTGGCGCCGGACAACGCCCGCTATGCCTATGTCTACGCGGTGGCGCTTCAGTCCCTCGGGCGCGCGCAG GACAGCGCCGCAGTGACCCGCGATGCCCTAGCTCGCGTCCCCAATGATGTCGACCTGCTATCCCTGCAGCTGAACGAAGC CCTGCGCGCCGGCGATGTCGATCGCGCGCGGGAAGCCGTTTCGAAGCTCACGCTTCTGCGGCCGGATGACACCGAGATTG CGCGCCTGAATGCGCGCCTGCGCTGA
Upstream 100 bases:
>100_bases ACTGAAAATAGCCTCGCTTCATGCTGCGGGCCGTCTGTCGTTCGTGGCGCAGCAGGCGGGTACAGTGGCGCTCGTTCGAC GATTCCCGAGGGTATGAACC
Downstream 100 bases:
>100_bases CGCCACCCATCGTATGGATGGGGAAACGCCCGCCGCGCGCTGCCCGCCGCCCCAATACATCGGTGATGCCGACACGAAAA CGCCCCGGCACCTCAACAGG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Cytochrome C Family Protein; TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain Protein; Doubled CXXCH Domain Protein; C-Type Cytochrome; FOG TPR Repeat; Signal Peptide; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Doubled CXXCH Domain-Containing Protein; Deca-Heme C-Type Cytochrome
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MSFRRLIGACVSALAAGILSAGVIALAAEFSSQRPGQALGPGGIGALTDQAPTGFVGSAACADCHGAQTRAWLSSQHAHA MARAEPQTVLGNFDDARVSHQGSSARFFRDGSRYMVETEGADGKSAAFEITDTFGVHPLQQYLVTFPDGRRQALPFAYDT QPAAEGGQRWFHLYPDQMIASTDILHWTGLQQNWNFMCAECHSTALRKNYDPAANRFDTRFSEISVGCEACHGPAGRHVE WARGPRDREAPNKGFASVAALRPPADWTIDPATGSPAHGVSRPAGDVVETCARCHARRSILSEDWRPGQPLTQTHLPTFL SEGLFEADGTMRDEVFNDHSFKQSLMYARGVTCGDCHEPHSAALRAPGSAVCAQCHLPEKFASEAHTGHAPGPKAPDCIS CHMPARTYMVVDKRHDHSFRIPRPDVSAQLGMPNACNDCHKDQSANWAAEAIARWHGPERKGFQDWAAALHDARGGDPAA REALIRLATTPATPAIVRATAVNELRGFPSIATDAAMQKALSDPDPLVRIAAVESAAGLPLETRWRRLAPLLIDPVAGVR IEAANQLADQPLAALSAADRDRLSTAFREYEAAQRLNADRPEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVN LADLYRLTGREREAQDVLERAIKANPDAAAPRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQ DSAAVTRDALARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPDDTEIARLNARLR
Sequences:
>Translated_781_residues MSFRRLIGACVSALAAGILSAGVIALAAEFSSQRPGQALGPGGIGALTDQAPTGFVGSAACADCHGAQTRAWLSSQHAHA MARAEPQTVLGNFDDARVSHQGSSARFFRDGSRYMVETEGADGKSAAFEITDTFGVHPLQQYLVTFPDGRRQALPFAYDT QPAAEGGQRWFHLYPDQMIASTDILHWTGLQQNWNFMCAECHSTALRKNYDPAANRFDTRFSEISVGCEACHGPAGRHVE WARGPRDREAPNKGFASVAALRPPADWTIDPATGSPAHGVSRPAGDVVETCARCHARRSILSEDWRPGQPLTQTHLPTFL SEGLFEADGTMRDEVFNDHSFKQSLMYARGVTCGDCHEPHSAALRAPGSAVCAQCHLPEKFASEAHTGHAPGPKAPDCIS CHMPARTYMVVDKRHDHSFRIPRPDVSAQLGMPNACNDCHKDQSANWAAEAIARWHGPERKGFQDWAAALHDARGGDPAA REALIRLATTPATPAIVRATAVNELRGFPSIATDAAMQKALSDPDPLVRIAAVESAAGLPLETRWRRLAPLLIDPVAGVR IEAANQLADQPLAALSAADRDRLSTAFREYEAAQRLNADRPEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVN LADLYRLTGREREAQDVLERAIKANPDAAAPRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQ DSAAVTRDALARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPDDTEIARLNARLR >Mature_780_residues SFRRLIGACVSALAAGILSAGVIALAAEFSSQRPGQALGPGGIGALTDQAPTGFVGSAACADCHGAQTRAWLSSQHAHAM ARAEPQTVLGNFDDARVSHQGSSARFFRDGSRYMVETEGADGKSAAFEITDTFGVHPLQQYLVTFPDGRRQALPFAYDTQ PAAEGGQRWFHLYPDQMIASTDILHWTGLQQNWNFMCAECHSTALRKNYDPAANRFDTRFSEISVGCEACHGPAGRHVEW ARGPRDREAPNKGFASVAALRPPADWTIDPATGSPAHGVSRPAGDVVETCARCHARRSILSEDWRPGQPLTQTHLPTFLS EGLFEADGTMRDEVFNDHSFKQSLMYARGVTCGDCHEPHSAALRAPGSAVCAQCHLPEKFASEAHTGHAPGPKAPDCISC HMPARTYMVVDKRHDHSFRIPRPDVSAQLGMPNACNDCHKDQSANWAAEAIARWHGPERKGFQDWAAALHDARGGDPAAR EALIRLATTPATPAIVRATAVNELRGFPSIATDAAMQKALSDPDPLVRIAAVESAAGLPLETRWRRLAPLLIDPVAGVRI EAANQLADQPLAALSAADRDRLSTAFREYEAAQRLNADRPEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVNL ADLYRLTGREREAQDVLERAIKANPDAAAPRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQD SAAVTRDALARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPDDTEIARLNARLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24647123, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84519; Mature: 84387
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS51008 MULTIHEME_CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFRRLIGACVSALAAGILSAGVIALAAEFSSQRPGQALGPGGIGALTDQAPTGFVGSAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH CADCHGAQTRAWLSSQHAHAMARAEPQTVLGNFDDARVSHQGSSARFFRDGSRYMVETEG HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCEEECCCEEEEEECC ADGKSAAFEITDTFGVHPLQQYLVTFPDGRRQALPFAYDTQPAAEGGQRWFHLYPDQMIA CCCCCCEEEEECCCCCCHHHHHHEECCCCCCCCCCEEECCCCCCCCCCEEEEECCHHHHH STDILHWTGLQQNWNFMCAECHSTALRKNYDPAANRFDTRFSEISVGCEACHGPAGRHVE HCCCCEECCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WARGPRDREAPNKGFASVAALRPPADWTIDPATGSPAHGVSRPAGDVVETCARCHARRSI CCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSEDWRPGQPLTQTHLPTFLSEGLFEADGTMRDEVFNDHSFKQSLMYARGVTCGDCHEPH HHCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCH SAALRAPGSAVCAQCHLPEKFASEAHTGHAPGPKAPDCISCHMPARTYMVVDKRHDHSFR HHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCC IPRPDVSAQLGMPNACNDCHKDQSANWAAEAIARWHGPERKGFQDWAAALHDARGGDPAA CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHH REALIRLATTPATPAIVRATAVNELRGFPSIATDAAMQKALSDPDPLVRIAAVESAAGLP HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCC LETRWRRLAPLLIDPVAGVRIEAANQLADQPLAALSAADRDRLSTAFREYEAAQRLNADR HHHHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVNLADLYRLTGREREAQDVLER CHHHHHHCHHEEECCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AIKANPDAAAPRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQ HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCH DSAAVTRDALARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPDDTEIARLNARL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHCCCC R C >Mature Secondary Structure SFRRLIGACVSALAAGILSAGVIALAAEFSSQRPGQALGPGGIGALTDQAPTGFVGSAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH CADCHGAQTRAWLSSQHAHAMARAEPQTVLGNFDDARVSHQGSSARFFRDGSRYMVETEG HHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCEEECCCEEEEEECC ADGKSAAFEITDTFGVHPLQQYLVTFPDGRRQALPFAYDTQPAAEGGQRWFHLYPDQMIA CCCCCCEEEEECCCCCCHHHHHHEECCCCCCCCCCEEECCCCCCCCCCEEEEECCHHHHH STDILHWTGLQQNWNFMCAECHSTALRKNYDPAANRFDTRFSEISVGCEACHGPAGRHVE HCCCCEECCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WARGPRDREAPNKGFASVAALRPPADWTIDPATGSPAHGVSRPAGDVVETCARCHARRSI CCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH LSEDWRPGQPLTQTHLPTFLSEGLFEADGTMRDEVFNDHSFKQSLMYARGVTCGDCHEPH HHCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCH SAALRAPGSAVCAQCHLPEKFASEAHTGHAPGPKAPDCISCHMPARTYMVVDKRHDHSFR HHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCC IPRPDVSAQLGMPNACNDCHKDQSANWAAEAIARWHGPERKGFQDWAAALHDARGGDPAA CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHH REALIRLATTPATPAIVRATAVNELRGFPSIATDAAMQKALSDPDPLVRIAAVESAAGLP HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCC LETRWRRLAPLLIDPVAGVRIEAANQLADQPLAALSAADRDRLSTAFREYEAAQRLNADR HHHHHHHHHHHHHCCCCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEARSNLGGFLLRRGDVAGAEAQYRAGLKLQPDLPALAVNLADLYRLTGREREAQDVLER CHHHHHHCHHEEECCCCCCCCHHHHCCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AIKANPDAAAPRHALGLALIRQKRYGEALNELKRAYELAPDNARYAYVYAVALQSLGRAQ HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCH DSAAVTRDALARVPNDVDLLSLQLNEALRAGDVDRAREAVSKLTLLRPDDTEIARLNARL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCHHHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA