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The map label for this gene is ygiK [H]

Identifier: 154247294

GI number: 154247294

Start: 3752692

End: 3753972

Strand: Reverse

Name: ygiK [H]

Synonym: Xaut_3366

Alternate gene names: 154247294

Gene position: 3753972-3752692 (Counterclockwise)

Preceding gene: 154247295

Following gene: 154247282

Centisome position: 70.71

GC content: 63.7

Gene sequence:

>1281_bases
ATGGCACTGATCATTCTTGTCGTCACCTTCATCGCCACGCTCCTCATCGGCATGCCGGTGGTGTTCGCCATCGGCCTTTC
TTCCATCGCCACCGTTCTTTACGAAGGATTGCCGCTCGCGGTGGTGTTCCAGCGGATGGCGTCGGGCATGAATGTCTTCG
CCTTCCTCACCATCCCGTTCTTCATCCTGACCGGTGAACTGATGATGTATGGCGGCGTCGCGCACCGCATCATCCGCTGC
TCGAAGGCGCTGGTGGGCCATGTGCGCGGCGGACTGGGCATGACCAATGTGGTGGCCTGCACCATGTTCGGCGGCATTTC
CGGCTCGCCGGTGGCCGATGTGTCGGCCATGGGCTCGGCGCTGATCCCGCTCATGAAGAAGGAGGGGATCGACGCCGACT
ATGCGGTGAACGTCACCACCTATTCCTCGCTCGTGGGCGCGCTGATGCCCACCAGCCACAACATGATCATCTATTCGCTG
GCGGCCGGCGGCGCGGTCTCCATGAGCTCGCTGATCATGGCCGGCGCCGTGCCCGCAGCCATGCTCACCATCGCCAACCT
GCTGGCCGCCTATTTCGTGGCGCGCTCACGAGGCTATCCCAGCAGCCCGTTCACCGGCTGGGGCGAAGTGTGGCTGAGCC
TTGCGGCGGCGCTGCCGGGGCTGTTCATTGTGGTGATCATCGTCGGCGGCATCCTGTCGGGCGTCTTCACCGCGGCCGAG
GCGGGCGCCGTGGCGGTGGGCTACGCCCTGCTGCTCACTACCCTGGTCTACCGCAGCCTCACCTGGCAACACTTCCTCAT
GGCGGCGGCGAAGGCCGCCAAGACCACCGGCATCGTGCTGCTGCTGATCGGCATCTCCACCATGTTCGGCTATCTCATGA
GCATCTACGGCATCGCCGACATGGTGGGCGACGCACTGGCCAGCATCAGCACGCGGCCGTGGGTGATCTTCATCCTGGTC
AATATCGCGCTGTTCCTGTTCGGCATCTTCCTGGACATGGCGGCGCATATCCTGGTGTGCACGCCCATCTTCCTGCCCAT
CGTGCAGCACTACGGCATGGACCCGGTGCAGTTCGGCATCATCGTGCTGCTCAACTCCACCATCGGCCTCAATACCCCGC
CGGTGGGCGCCGCCTTTTATCTTGGCTGCGCCATCGGCGAGGTGTCTGTGTCCCAGGTGGTGCGGTCGATCTGGCCGTTC
ATGCTGGCCCTGTGGGTGACGCTGATGATCGTGACCCTGGTGCCGGAAACCTCCATGCTGGTCCATGACCTGCTGAAGTG
A

Upstream 100 bases:

>100_bases
CCTGGTCCTACATCCCGCTCGCCATCGGCGGGATCCTCATCAGCATGTTCGCGGTGGAGCGCATCGTCGCAACTCTATTG
AATATCAAGGTGGTTGCGTC

Downstream 100 bases:

>100_bases
AGTCCAGCCGCCCGGCTGGGCGGCGGAGGAAAGAGCACAAGGGCCGCCCGGGCAGAACCGCTCGGGTGGCCCTTTCTTTT
GCGACTCAAGAGGCCGGAGG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MALIILVVTFIATLLIGMPVVFAIGLSSIATVLYEGLPLAVVFQRMASGMNVFAFLTIPFFILTGELMMYGGVAHRIIRC
SKALVGHVRGGLGMTNVVACTMFGGISGSPVADVSAMGSALIPLMKKEGIDADYAVNVTTYSSLVGALMPTSHNMIIYSL
AAGGAVSMSSLIMAGAVPAAMLTIANLLAAYFVARSRGYPSSPFTGWGEVWLSLAAALPGLFIVVIIVGGILSGVFTAAE
AGAVAVGYALLLTTLVYRSLTWQHFLMAAAKAAKTTGIVLLLIGISTMFGYLMSIYGIADMVGDALASISTRPWVIFILV
NIALFLFGIFLDMAAHILVCTPIFLPIVQHYGMDPVQFGIIVLLNSTIGLNTPPVGAAFYLGCAIGEVSVSQVVRSIWPF
MLALWVTLMIVTLVPETSMLVHDLLK

Sequences:

>Translated_426_residues
MALIILVVTFIATLLIGMPVVFAIGLSSIATVLYEGLPLAVVFQRMASGMNVFAFLTIPFFILTGELMMYGGVAHRIIRC
SKALVGHVRGGLGMTNVVACTMFGGISGSPVADVSAMGSALIPLMKKEGIDADYAVNVTTYSSLVGALMPTSHNMIIYSL
AAGGAVSMSSLIMAGAVPAAMLTIANLLAAYFVARSRGYPSSPFTGWGEVWLSLAAALPGLFIVVIIVGGILSGVFTAAE
AGAVAVGYALLLTTLVYRSLTWQHFLMAAAKAAKTTGIVLLLIGISTMFGYLMSIYGIADMVGDALASISTRPWVIFILV
NIALFLFGIFLDMAAHILVCTPIFLPIVQHYGMDPVQFGIIVLLNSTIGLNTPPVGAAFYLGCAIGEVSVSQVVRSIWPF
MLALWVTLMIVTLVPETSMLVHDLLK
>Mature_425_residues
ALIILVVTFIATLLIGMPVVFAIGLSSIATVLYEGLPLAVVFQRMASGMNVFAFLTIPFFILTGELMMYGGVAHRIIRCS
KALVGHVRGGLGMTNVVACTMFGGISGSPVADVSAMGSALIPLMKKEGIDADYAVNVTTYSSLVGALMPTSHNMIIYSLA
AGGAVSMSSLIMAGAVPAAMLTIANLLAAYFVARSRGYPSSPFTGWGEVWLSLAAALPGLFIVVIIVGGILSGVFTAAEA
GAVAVGYALLLTTLVYRSLTWQHFLMAAAKAAKTTGIVLLLIGISTMFGYLMSIYGIADMVGDALASISTRPWVIFILVN
IALFLFGIFLDMAAHILVCTPIFLPIVQHYGMDPVQFGIIVLLNSTIGLNTPPVGAAFYLGCAIGEVSVSQVVRSIWPFM
LALWVTLMIVTLVPETSMLVHDLLK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=400, Percent_Identity=32.25, Blast_Score=207, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44833; Mature: 44701

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHC
>Mature Secondary Structure 
ALIILVVTFIATLLIGMPVVFAIGLSSIATVLYEGLPLAVVFQRMASGMNVFAFLTIPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH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HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]