| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is proP [H]
Identifier: 154247281
GI number: 154247281
Start: 3732585
End: 3734276
Strand: Reverse
Name: proP [H]
Synonym: Xaut_3353
Alternate gene names: 154247281
Gene position: 3734276-3732585 (Counterclockwise)
Preceding gene: 154247282
Following gene: 154247275
Centisome position: 70.34
GC content: 65.19
Gene sequence:
>1692_bases ATGAGCGTGACGACTGCAGGGGCGGCCGCCAAGCCGCGTCCCATGAGCCGGGAGGAGAAGAAGGTCATCTTCGCCTCCTC CCTCGGCACCGTATTCGAGTGGTACGATTTTTATCTGTACGGCTCGCTGGCGGCCATCATCGGCGCCCAGTTCTTCAATG TGGCGGGCGCCGACGGCAAGCCCATGTTCGACCAGGCGACGCGCGACATCTTCGCGTTGCTCGCCTTTGCCGCCGGCTTC CTGGTGCGGCCGTTCGGCGCCATCGTGTTCGGGCGCATCGGCGACCTCGTCGGCCGCAAATATACCTTCCTCGTCACCAT CCTCATCATGGGCCTGTCGACTTTCATCGTCGGCATTCTGCCCTCCTCCACCCAGATCGGCATCCTCGCCCCGATCGTCC TCATCGGCCTGCGCCTGCTCCAGGGCCTGGCGCTGGGCGGCGAGTACGGCGGCGCGGCGACCTATGTGGCGGAGCATGCC CCCCACGGGCGGCGCGGCTTCTACACCTCGTGGATCCAGACCACCGCTACGCTGGGACTGTTCCTGTCGCTGATCATCAT CCTGGTCACCCGCACCCTGGTGGGCGAGCCGGCGTTCGCGGCCTGGGGCTGGCGCATTCCGTTCCTGGTATCCATCGCCC TGCTCGGCATCTCGGTGTGGATCCGGCTCCAGCTCTCCGAATCGCCCACCTTCAAGAAGATGAAGGAGGAGGGCACCACC TCCAAGGCGCCGCTTTCGGAAGCCTTCGGCGCTTGGGGCAACCTGAAAGTCGTCCTGATCGCCCTGTTCGGCCTTGTCGC GGGCCAGGGCGTGGTCTGGTACACGGGCCAGTTCTATGCCCTGTTCTTCCTGCAATCGATCCTGAAGGTGGACGGCTACA CCTCCAACCTGCTGATCGCCTGGTCGCTGGTGTTCGGCACCGGCTTCTTCGTGTTCTTCGGCTGGCTGTCGGACAAGATC GGCCGCAAGCCCATCATCCTCGCCGGCTGCCTGATCGCCGCCGCGAGCTACTTCCCGCTGTTCAACATGATCACCTCCTA CGCCAACCCGGCGCTGGAGAAGGCCATCCAGAACGTGCGGGTGACGGTGGTGTCCGACCCGGCCAATTGCGGCAGCCTGT TCAACCCGGTGGGCACCCGCGTCTATACCGCGCCGTGCGACATGGCCCGCGACTTCCTGGCGAAGTCCTCGGTGAAGTAC TCCACGGAACCCGGCCCCGCCGGCGCGCCGGTGCAGTTGAAGGTGAACGACGTGGTGGTGCCCTACGGCCCGGACTTCAA CAAGTCTGCCGCCGCAGCGCTGCAGGCGGCGGGCTATCCCACCGCCGCCACGAACAAGGACATCATCAAGATGGCCCATC CGTTCGACATCTTCCAGGCGCGAACGGCTGCTGTGATCGGGCTGCTGTTCATCCTGGTGCTGTTCGTGACCATGGTGTAC GGCCCCATCGCGGCGGCGCTGGTGGAGCTGTTCCCGGCCCGCATCCGCTACACCTCCATGTCGCTGCCCTACCACATCGG CAACGGCTGGTTCGGCGGCCTTCTGCCGGCCACCGCCTTCGCCATGGTGGCGGCCACCGGCGATATCTACTACGGCCTCT GGTACCCGATCGTGATCGCCCTGATGACCTTTATCATCGGCCTCCTGTTCGTGCCCGAGACCAAGGACCGCAACATCGAC CACTGGCACTGA
Upstream 100 bases:
>100_bases TGTTTTGCGTTGTGCCGGCACGGCCCGCCTTCCGACAGATCGTGTTCAGTTCGACATCCGCCCCCGGGCGGAGCCCTGAT GCGACGGGAGGGACTTTTCC
Downstream 100 bases:
>100_bases CGCCGGCGCGCGGTTCCCCCGCGCCGCGTCCGGCCCGGCAGGACGGCCCCGCCCCCAAGGCGGGGCCGTTCCTTTTGGGG ACTGGTCTGGGGGCGCTTGT
Product: major facilitator transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSVTTAGAAAKPRPMSREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFNVAGADGKPMFDQATRDIFALLAFAAGF LVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPSSTQIGILAPIVLIGLRLLQGLALGGEYGGAATYVAEHA PHGRRGFYTSWIQTTATLGLFLSLIIILVTRTLVGEPAFAAWGWRIPFLVSIALLGISVWIRLQLSESPTFKKMKEEGTT SKAPLSEAFGAWGNLKVVLIALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLVFGTGFFVFFGWLSDKI GRKPIILAGCLIAAASYFPLFNMITSYANPALEKAIQNVRVTVVSDPANCGSLFNPVGTRVYTAPCDMARDFLAKSSVKY STEPGPAGAPVQLKVNDVVVPYGPDFNKSAAAALQAAGYPTAATNKDIIKMAHPFDIFQARTAAVIGLLFILVLFVTMVY GPIAAALVELFPARIRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALMTFIIGLLFVPETKDRNID HWH
Sequences:
>Translated_563_residues MSVTTAGAAAKPRPMSREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFNVAGADGKPMFDQATRDIFALLAFAAGF LVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPSSTQIGILAPIVLIGLRLLQGLALGGEYGGAATYVAEHA PHGRRGFYTSWIQTTATLGLFLSLIIILVTRTLVGEPAFAAWGWRIPFLVSIALLGISVWIRLQLSESPTFKKMKEEGTT SKAPLSEAFGAWGNLKVVLIALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLVFGTGFFVFFGWLSDKI GRKPIILAGCLIAAASYFPLFNMITSYANPALEKAIQNVRVTVVSDPANCGSLFNPVGTRVYTAPCDMARDFLAKSSVKY STEPGPAGAPVQLKVNDVVVPYGPDFNKSAAAALQAAGYPTAATNKDIIKMAHPFDIFQARTAAVIGLLFILVLFVTMVY GPIAAALVELFPARIRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALMTFIIGLLFVPETKDRNID HWH >Mature_562_residues SVTTAGAAAKPRPMSREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFNVAGADGKPMFDQATRDIFALLAFAAGFL VRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGILPSSTQIGILAPIVLIGLRLLQGLALGGEYGGAATYVAEHAP HGRRGFYTSWIQTTATLGLFLSLIIILVTRTLVGEPAFAAWGWRIPFLVSIALLGISVWIRLQLSESPTFKKMKEEGTTS KAPLSEAFGAWGNLKVVLIALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIAWSLVFGTGFFVFFGWLSDKIG RKPIILAGCLIAAASYFPLFNMITSYANPALEKAIQNVRVTVVSDPANCGSLFNPVGTRVYTAPCDMARDFLAKSSVKYS TEPGPAGAPVQLKVNDVVVPYGPDFNKSAAAALQAAGYPTAATNKDIIKMAHPFDIFQARTAAVIGLLFILVLFVTMVYG PIAAALVELFPARIRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIALMTFIIGLLFVPETKDRNIDH WH
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=340, Percent_Identity=35.2941176470588, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1788292, Length=340, Percent_Identity=33.2352941176471, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1788942, Length=352, Percent_Identity=32.1022727272727, Blast_Score=148, Evalue=9e-37, Organism=Escherichia coli, GI1789941, Length=341, Percent_Identity=34.3108504398827, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI87082404, Length=338, Percent_Identity=25.4437869822485, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI87082231, Length=233, Percent_Identity=25.3218884120172, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 60880; Mature: 60749
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTAGAAAKPRPMSREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFNVAGADGK CCCCCCCCCCCCCCCCCCHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PMFDQATRDIFALLAFAAGFLVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PSSTQIGILAPIVLIGLRLLQGLALGGEYGGAATYVAEHAPHGRRGFYTSWIQTTATLGL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FLSLIIILVTRTLVGEPAFAAWGWRIPFLVSIALLGISVWIRLQLSESPTFKKMKEEGTT HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCC SKAPLSEAFGAWGNLKVVLIALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIA CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHH WSLVFGTGFFVFFGWLSDKIGRKPIILAGCLIAAASYFPLFNMITSYANPALEKAIQNVR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCE VTVVSDPANCGSLFNPVGTRVYTAPCDMARDFLAKSSVKYSTEPGPAGAPVQLKVNDVVV EEEEECCCCCHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEE PYGPDFNKSAAAALQAAGYPTAATNKDIIKMAHPFDIFQARTAAVIGLLFILVLFVTMVY ECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GPIAAALVELFPARIRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIA HHHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LMTFIIGLLFVPETKDRNIDHWH HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SVTTAGAAAKPRPMSREEKKVIFASSLGTVFEWYDFYLYGSLAAIIGAQFFNVAGADGK CCCCCCCCCCCCCCCCCHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PMFDQATRDIFALLAFAAGFLVRPFGAIVFGRIGDLVGRKYTFLVTILIMGLSTFIVGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC PSSTQIGILAPIVLIGLRLLQGLALGGEYGGAATYVAEHAPHGRRGFYTSWIQTTATLGL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH FLSLIIILVTRTLVGEPAFAAWGWRIPFLVSIALLGISVWIRLQLSESPTFKKMKEEGTT HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHCCCC SKAPLSEAFGAWGNLKVVLIALFGLVAGQGVVWYTGQFYALFFLQSILKVDGYTSNLLIA CCCCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCHHHH WSLVFGTGFFVFFGWLSDKIGRKPIILAGCLIAAASYFPLFNMITSYANPALEKAIQNVR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCE VTVVSDPANCGSLFNPVGTRVYTAPCDMARDFLAKSSVKYSTEPGPAGAPVQLKVNDVVV EEEEECCCCCHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEE PYGPDFNKSAAAALQAAGYPTAATNKDIIKMAHPFDIFQARTAAVIGLLFILVLFVTMVY ECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GPIAAALVELFPARIRYTSMSLPYHIGNGWFGGLLPATAFAMVAATGDIYYGLWYPIVIA HHHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LMTFIIGLLFVPETKDRNIDHWH HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]