| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is yjgR [H]
Identifier: 154247241
GI number: 154247241
Start: 3683835
End: 3685532
Strand: Direct
Name: yjgR [H]
Synonym: Xaut_3313
Alternate gene names: 154247241
Gene position: 3683835-3685532 (Clockwise)
Preceding gene: 154247238
Following gene: 154247242
Centisome position: 69.39
GC content: 69.08
Gene sequence:
>1698_bases ATGGCACGCACCCCTTCCACCCGTCCGCCCGCCACCGGCCCGAGAACGGGCAAGGCGCCGGTGGCCGACGCCGCGCCTCC CGCATCCGTGGGACCGACCGAGCCGAAGGCCAATCCCTGGGGGCCGGCGGCGCAGGAGGAGGGCGACGGCCGCATCCTGG TGGGGCGCAGCTTCCTTGGCCGCAGCGAAGCGGCGAAAGCAGGCACCAGCGCCAAGGATGAATATCTCACCCTGCGCCTC GCCAACCGCCACGGCCTGGTGACCGGCGCCACGGGCACCGGCAAGACCGTGACGCTGCAGGTTCTGGCCGAAGGGTTTTC GCGGGCCGGGGTGCCAGTGTTCGCCGCCGACATCAAGGGCGACCTCTCCGGCGTGGCCGCCCTTGGCGAGGCCAAGGACT TCCTGGTCGAGCGGGCGCAGCAGGTGGGCATCACCTACACCCCGGACAGCTTCCCGGTGATCTTCTGGGACCTGTTCGGC GAGCAGGGCCACCCCATCCGCGCCACCGTGTCGGAGATGGGGCCGCTGCTGCTGGCGCGCCTCATGGGCCTCAACGACAC CCAGGAGGGCGTGCTCAACATCGTGTTCCGCCTCGCCGACGAGCAGGGCCTGCCGATCCTGGATCTCAAGGACCTCAGGG CCATGCTGGCCGAGGTCGCCCAGACCGCCTCCACCCTCACCACCAAGTACGGCAACGTCTCGGCGCAGAGCGTCGGGGCC ATCCAGCGCCAGCTTCTGGTGCTGGAGAACCAGGGGGCGGACAAGTTCTTCGGCGAGCCGGCGCTGAACATCGCCGACCT GATGCGGGTGGATCGCTCGGGCTATGGCACCATCTCGGTGCTGGCCGCGGACAAGCTGATGGGCGCACCGCGGCTTTATG CCTGCTTCCTGCTGTGGCTTCTGTCGGAACTCTTCGAGCGCCTGCCAGAGGTGGGCGATCCGGACAAACCGAAGCTCGTC TTCTTCTTCGACGAGGCGCATCTGTTGTTCGATGAGGCGCCCAAGGCGCTGCTGGACAAGGTGGAGCAGGTGGTTCGCCT CATTCGCTCCAAGGGGGTGGGTGTCTATTTCGTCTCCCAGAACCCGCTGGACATTCCCGAAAGCGTGCTCGCCCAGCTCG GCAACCGGGTGCAGCACGCCCTGCGCGCCTTCACTCCGCGTGACCAGAAGGCGGTGAAGGCTGCGGCCGAGACCTTCCGG CCCAATCCCGATCTCGACACCGCTCAGGTCATCATGGAACTGGGCAAGGGCGAGGCACTGGTCTCCATGCTGGAGGGCAA TGGCGTGCCCTCTATGGTGGAGCGCACGCTCATCCGCCCGCCCTGCGGCCGAATCGGCCCGTTGAGCGCCGACGAGCGCG CGGCGGTGATGGCCAGGAGCCCGGTGGGGCACATCTATGACACGCCCATCGATCGCGAATCGGCGTTCGAGATGCTGCAG AAGCGAATCGAGGAGAAGGCCGCCCCGCAGGAGGCGGCGGCCTCCGACGGCGGCGGATTTCTTGGCGGGGTGCTCGACAG CGTGCTGGGCACCGGCCAGGCCGCCGGCAGGACGCCATCCGGGACGGCGCGGAGCGGCGGCCGGCCCAGCACCCGCATGA CCACCACCGAGGTGGTGGTGAACCAGGTGGCGCGAACCGTGGCCACGGGTCTCGGCCGGGCCATCCTGCGCGGCATCCTC GGCTCCATCCGACGCTGA
Upstream 100 bases:
>100_bases GCAGGGGCGGGCGAAAACTTCGGATTGAAGAGACCGGATGCATCCGGCGATTCGTCGCTGTTGCATGCGTCGATGCGAGG ATCGCGCCGAGGAGCACGCA
Downstream 100 bases:
>100_bases CGTTCACCTAAAGGGGAACGAACGACAGTTTGTACTGATCTTGGAGCCCGAAAACGTATTCTGTTGCGTTGGCGCGGGCG GGGCGGTATAATTGCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRL ANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFG EQGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLV FFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFR PNPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGIL GSIRR
Sequences:
>Translated_565_residues MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRL ANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFG EQGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLV FFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFR PNPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGIL GSIRR >Mature_564_residues ARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRLA NRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGE QGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGAI QRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLVF FFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRP NPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQK RIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGILG SIRR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=500, Percent_Identity=55.8, Blast_Score=531, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 60056; Mature: 59924
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHC RSEAAKAGTSAKDEYLTLRLANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKG CHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEHHHHHHHHHHCCCCEEEECCCC DLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGEQGHPIRATVSEMGPLLLAR CHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH LMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA HHCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWL HHHHHHHEECCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHH LSELFERLPEVGDPDKPKLVFFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQ HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEECC NPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRPNPDLDTAQVIMELGKGEAL CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH VSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVV HHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NQVARTVATGLGRAILRGILGSIRR HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHC RSEAAKAGTSAKDEYLTLRLANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKG CHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEHHHHHHHHHHCCCCEEEECCCC DLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGEQGHPIRATVSEMGPLLLAR CHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH LMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA HHCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWL HHHHHHHEECCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHH LSELFERLPEVGDPDKPKLVFFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQ HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEECC NPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRPNPDLDTAQVIMELGKGEAL CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH VSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVV HHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH NQVARTVATGLGRAILRGILGSIRR HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]