| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is cobG [H]
Identifier: 154247213
GI number: 154247213
Start: 3644844
End: 3646160
Strand: Reverse
Name: cobG [H]
Synonym: Xaut_3285
Alternate gene names: 154247213
Gene position: 3646160-3644844 (Counterclockwise)
Preceding gene: 154247214
Following gene: 154247212
Centisome position: 68.68
GC content: 74.26
Gene sequence:
>1317_bases ATGAGCCCGCGCCCGCCCGCGCGCCGGGGCGCCTGCCCTGCCTTCCTCGCGCCCATGGAAACCGGCGACGGCTTGATCCT GCGCCTCGTGCCGGCGGAGGGCGCCATCTCCTCCGGCCAGTTGCGCGGTCTGGCCCGCGCGGCCACCGCCTTCGGCAATT CCATGATGGAGATCACCGCTCGCGGCAGCCTTCAGGTGCGCGGGCTGACGGCGGAAACGGTGGCGCCGCTTCAGGATGCT GTGCTCGCGCTGGGCATTACGCCGCGCCTCGGCCTCGCCATCGATATCTCCCCCCTGTCGGGGCTCGACCCCCGGGAGAT TGCCGATGCCCGTCCCCTCGCCCAACGCATCCGGGAGGGTGCGGCAGGGCTTGCAGGCAAGCTGGGGCCGAAGGTGTCCG TGGTCGTCGATGGCGGCGGCGCCATCAGCCTTGGCGGCCACAAGGCGGATGTGCGCCTCGTCGCCATGCGCTCCAGCCCG GGCGTGAGGTGGTCCATAACCATCGGCGGCGGCGCACCGGAACTGCTGGCGGAGCAGGATGCGGCGTCGCTCGCCCTCGA CGCCCTGTCGCGGATCGCCGCCCTCGGCCGCCGCGCCCGCGCCACCGACCTGCTGGGGTGCGCCGCGACGCAACCCGCCA CCTCCGGTGATGACGGCACGCCCGCCACTCCGCTGGGCACCTTCTCCCTCGCCGGCGGCCGCTTCGCCTGCGGCATCGGC CTGCCCTTCGGCGCCGGCGCGGCCGACCTGTTCGCGGCTCTCGCCGATGCCGCGGAAAAGGCCGGCGCCCGCGACCTGCG GCCGGCCACCGAGCGGGTGCTCCTCGCCACCGGCCTCGACGCGGAGGGCGCCCATGCCTTCGCGGCCGACGCCCGGCGGC TCGGCTGCCTGACGGCGCCCGACGATCCCCGCGCCTTCATCGCCGCGTGCCCCGGCGCGCCGGCCTGCGTCTGCGCTCAT TTTCCGGCGCGCGACCTCGCGCCCAATGTCGCCGAGGCCCTTGCGCCGCTGCTGGACGGGACGGTGACGGTACATTTGTC CGCCTGCGCCAAGGGCTGCGCCCATCCCGCGCCGGCGACCCTCACCTTCGTGGGCATGGACGAGGGGATCGCTCTGGTGC ATGAGGGCGCACCGTCCGGGGCACGCGGTCCGGCGATCGCGGTGGATGCCTTGGTGGCGACGCTCGCAACGCTCGCCGCC ACGTCCCGCGCGCCCGGCGAGACGGGACGCGGGCTTCTGGCCCGGATGCAAGAGGCAGGTTTACCGGCGGGCCTGTGGCT GCGCGAAGGAAACGACAGACCGATGGTGAAGACGTGA
Upstream 100 bases:
>100_bases GCCGCAACGCCCTCGACGCCGATCTGGAAGGCCTCCTCGCGGAGGCTGCCCCGCTTCAAGAAGCCGCGCCTCAAGAAGAC ACACCGAAGGAGGCGGCCGA
Downstream 100 bases:
>100_bases CGAGCCGCGCAGCATGACCCTCCCCTTCAACTACGTGCGCGACGGCACCGCCATCTACGAGCGCTCCTTCGCCATTATCC GCGCCGAGGCCGACCTGTCG
Product: precorrin-3B synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDA VLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSP GVRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAH FPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAA TSRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT
Sequences:
>Translated_438_residues MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDA VLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSP GVRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAH FPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAA TSRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT >Mature_437_residues SPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDAV LALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPG VRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIGL PFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAHF PARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAAT SRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT
Specific function: Catalyzes the elimination of C-20 in precorrin-3A to form precorrin-3B [H]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012798 - InterPro: IPR005117 - InterPro: IPR006066 [H]
Pfam domain/function: PF03460 NIR_SIR_ferr [H]
EC number: =1.14.13.83 [H]
Molecular weight: Translated: 43807; Mature: 43676
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITA CCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE RGSLQVRGLTAETVAPLQDAVLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREG CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH AAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPGVRWSITIGGGAPELLAEQD HCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH AASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEC LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAP CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCCC DDPRAFIAACPGAPACVCAHFPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPAT CCCCEEEEECCCCCEEEEECCCCHHCCCHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCE LTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAATSRAPGETGRGLLARMQEAG EEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC LPAGLWLREGNDRPMVKT CCCEEEEEECCCCCCCCC >Mature Secondary Structure SPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITA CCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE RGSLQVRGLTAETVAPLQDAVLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREG CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH AAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPGVRWSITIGGGAPELLAEQD HCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH AASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEC LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAP CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCCC DDPRAFIAACPGAPACVCAHFPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPAT CCCCEEEEECCCCCEEEEECCCCHHCCCHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCE LTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAATSRAPGETGRGLLARMQEAG EEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC LPAGLWLREGNDRPMVKT CCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521 [H]