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The map label for this gene is 154247199

Identifier: 154247199

GI number: 154247199

Start: 3633505

End: 3633972

Strand: Reverse

Name: 154247199

Synonym: Xaut_3271

Alternate gene names: NA

Gene position: 3633972-3633505 (Counterclockwise)

Preceding gene: 154247201

Following gene: 154247195

Centisome position: 68.45

GC content: 67.95

Gene sequence:

>468_bases
ATGAACGACAAGGCACCATCTCTTGCCCCGGCACCCGGCGACGGCAAGCGCGGGACGCACGGCTATCTGGGCTACCTCTT
ACGCCAGGCCGCCACGGCTCATCGCCAGCGCATGGAGAAGGCGCTCTCGGGCCTTGGGCTGACCGCGCCGCAATTCACAG
TCATGACGATGGTGGAGGCCTATCCAGGCTTGAGCGGCGCGGACCTCGCGCGCCTTGCCCTCGTCACGCCGCAGACAGTC
AGCGTGATTCTTGCCAATCTCGAGCGGGCGGACTTGGTGCGCCGGACGCCTCACGCCGTGCATGGACGCATCCTCGAAGT
TGTGCTCACCGAAGCTGGCCGCGCGCTGCTTGTCGATGCGCGGGCGCGGGTCCATGCTCTGGAGCCCGACCTGCAAGCGG
ACCTGACCCCCGAAGCGGAAGACGCAGTGCGTCGCTGGCTCGTGGCCGTGGCGCAGCTTGCCCCGTAG

Upstream 100 bases:

>100_bases
GGCCTTGTAGGTGGGGCGGGAAAGCGGATCGGCCATGAACTGGTCCTTTCGATGATCCTCAGGCAATATCAAAGCTCGAA
TATAATATCAGAGCTTTGAT

Downstream 100 bases:

>100_bases
CCTCAGCTCTTCAGCCGGTAGCCGGTACGGAACATCCAGCGCACGGTGACGAGGCACACGGCGAGGAAGGCGAGCGTCAT
GGCGAAGCTCACCTCCACCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNDKAPSLAPAPGDGKRGTHGYLGYLLRQAATAHRQRMEKALSGLGLTAPQFTVMTMVEAYPGLSGADLARLALVTPQTV
SVILANLERADLVRRTPHAVHGRILEVVLTEAGRALLVDARARVHALEPDLQADLTPEAEDAVRRWLVAVAQLAP

Sequences:

>Translated_155_residues
MNDKAPSLAPAPGDGKRGTHGYLGYLLRQAATAHRQRMEKALSGLGLTAPQFTVMTMVEAYPGLSGADLARLALVTPQTV
SVILANLERADLVRRTPHAVHGRILEVVLTEAGRALLVDARARVHALEPDLQADLTPEAEDAVRRWLVAVAQLAP
>Mature_155_residues
MNDKAPSLAPAPGDGKRGTHGYLGYLLRQAATAHRQRMEKALSGLGLTAPQFTVMTMVEAYPGLSGADLARLALVTPQTV
SVILANLERADLVRRTPHAVHGRILEVVLTEAGRALLVDARARVHALEPDLQADLTPEAEDAVRRWLVAVAQLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16596; Mature: 16596

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKAPSLAPAPGDGKRGTHGYLGYLLRQAATAHRQRMEKALSGLGLTAPQFTVMTMVEA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
YPGLSGADLARLALVTPQTVSVILANLERADLVRRTPHAVHGRILEVVLTEAGRALLVDA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC
RARVHALEPDLQADLTPEAEDAVRRWLVAVAQLAP
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDKAPSLAPAPGDGKRGTHGYLGYLLRQAATAHRQRMEKALSGLGLTAPQFTVMTMVEA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
YPGLSGADLARLALVTPQTVSVILANLERADLVRRTPHAVHGRILEVVLTEAGRALLVDA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC
RARVHALEPDLQADLTPEAEDAVRRWLVAVAQLAP
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]