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The map label for this gene is aidB [C]

Identifier: 154247194

GI number: 154247194

Start: 3627696

End: 3629486

Strand: Direct

Name: aidB [C]

Synonym: Xaut_3266

Alternate gene names: 154247194

Gene position: 3627696-3629486 (Clockwise)

Preceding gene: 154247191

Following gene: 154247196

Centisome position: 68.33

GC content: 69.57

Gene sequence:

>1791_bases
ATGAGCTATCGCGCGCCGGTGGAAGAGGTCGCCTTTTTTCTCAAGACCTGCACGGCTCTTCCCCTGCTGATGGAGCAGGG
CCTCGTGGACCTGTCCTTCGACGTGGTGGATCCGGTGCTGGAAGAGGCCGGCAAGTTCGCGGCGTCCGTCATCGCCCCCC
TCGACAAGGTGGCTGACAAGCAGGGCTGCACCCTCAAGGACGGCACGGTGACCACCCCCGAAGGCTGGCGCGCCGCCTAT
GAGGCCTGGACCGCCGCCGGCTGGAGTTCGGTCGCGGCCGAGGAAGAGTTCGGCGGCCAGCACCTGCCGACCTCGGTGAC
CTCGGCACTCACGGAATTCTGGAACTCCGCTTCGCCCGCCTTCGGCATCGGCGGCGTGCTGACCATGGGCGCCATCGAGG
CCCTCACCGCCCACGGCGCCCCCGAACTGCAGCAGACCTATCTCACCAAGATGGTGGCCGGCACCTGGACCGGCACCATG
AACCTCACCGAGCCGCAGGCGGGCTCGGACCTTGCCGCCCTGCGCGCCAAGGCGGTGAAGCAGGCGGACGGCACCTACCG
GGTGTTCGGCACCAAGATCTTCATCTCCTACGGCGAGCACGACATCGCCGAGAACATCGTGCACCTCGTGCTCGCCCGCC
TGCCGGATGCGCCGGCCGGCACCCGCGGCATCTCCCTGTTCCTGGTGCCGAAGGTGCTCGTGAATGCGGACGGCAGCTTC
GGCGAACGCAACGACGTGGTCTGCGCCGGCATCGAGCACAAGCTGGGCCTTCATGGCTCGCCCACCTGCACCATGGTGTT
CGGCGAAAAGGGCGAGGGCGCCATCGGCTATCTGGTGGGCGAGGAAAATCGCGGCCTCGCCTGCATGTTCACCATGATGA
ACAACGCCCGCCTCGCGGTGGGCATCCAGGGCGTGGCGGTGGCAGAGCGCGCCACCCAGCGCGCCTTCGCCTATGCCAAG
GACCGCCGGCAGGGCAAGGCGCCGGGCTTCGAGGGCTCGGCTCCCATCATCGCCCATCCCGATGTGAAGCGCATGCTGCT
GACCATGCGCGCCGAGACCGACGCCGCCCGGGCCATTTGCCTGAAGACCGCCGATGCCCTCGACCGCGCCCACCGCCTGC
CCGACCCCTCCGCCCGCGCGGCGGCGCTGGCCGAGGCGAGCCTTTTGACCCCGGTGGCCAAGGCCTTCTCCACCGACATC
GGAATCGAGGTGGCCTCTACCGGCGTGCAGGTGCACGGCGGCATGGGCTATGTGGAGGAGACGGGCGCTGCCCAGCACCT
GCGCGATGCCCGCATCTTCGCCATCTATGAGGGTACCAACGGTATCCAGGCCATCGACCTCGTCACCCGCAAGCTGCCGC
AGGAGGGCGGCGATGTGGTGAACGCGGTGATCGCCGATTATCGCGACATCGCCGCCGAGGTAGCCGCGCTGAATGCGCCG
GATTTCGGCCATACGGGGGTGCGGCTCGCCGAGGCGGTGGATGCGCTCGCCCGCGCCACCCGCAAGATGCTGGACTGGCT
GCCGAGCGACCAGGCCAAGGCGCTGGCCGGGGCGACGCCCTATCTGCGCCTGTTCGCCCGTGCCGCCGGCGGGGCCTATC
TCGCCAAGGTGGCGCTGGCCGCCTATGGGGAGCGCGCCGCGGGCGGCACCGATCCGCGCCTTGCCGCACGCATCGCCCTC
GCCCGCTTCTTCGCCGAGAACCTCGCGACCGAGGCGAAGGGGCTGGAAGAAGCCGTCACCAGCGGCGCCAATGGCGTGCT
GGAGGCGGAAGCGGTGCTCGCCGTCGCCTGA

Upstream 100 bases:

>100_bases
ACGAAGCCTGCCGGCGCCGCGATGTGGGAAGCCGAACGTCGCGTGCTTAGAGCGCGCCCCGCCGGGCCGGTCAAGCGCGT
GCCGCACAGGGGAGGGTCAC

Downstream 100 bases:

>100_bases
TGGGTCTCAGCGGCTGGCGAAGCCGTCGAAGATAAAGTCCGGTGCGCTGGTGTTGTGGCGGGAGGGCACGAGGCGCCCCG
CCCACAGCATGGCGACGTTG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MSYRAPVEEVAFFLKTCTALPLLMEQGLVDLSFDVVDPVLEEAGKFAASVIAPLDKVADKQGCTLKDGTVTTPEGWRAAY
EAWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPAFGIGGVLTMGAIEALTAHGAPELQQTYLTKMVAGTWTGTM
NLTEPQAGSDLAALRAKAVKQADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSF
GERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAVGIQGVAVAERATQRAFAYAK
DRRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAICLKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDI
GIEVASTGVQVHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAP
DFGHTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALAAYGERAAGGTDPRLAARIAL
ARFFAENLATEAKGLEEAVTSGANGVLEAEAVLAVA

Sequences:

>Translated_596_residues
MSYRAPVEEVAFFLKTCTALPLLMEQGLVDLSFDVVDPVLEEAGKFAASVIAPLDKVADKQGCTLKDGTVTTPEGWRAAY
EAWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPAFGIGGVLTMGAIEALTAHGAPELQQTYLTKMVAGTWTGTM
NLTEPQAGSDLAALRAKAVKQADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSF
GERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAVGIQGVAVAERATQRAFAYAK
DRRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAICLKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDI
GIEVASTGVQVHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAP
DFGHTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALAAYGERAAGGTDPRLAARIAL
ARFFAENLATEAKGLEEAVTSGANGVLEAEAVLAVA
>Mature_595_residues
SYRAPVEEVAFFLKTCTALPLLMEQGLVDLSFDVVDPVLEEAGKFAASVIAPLDKVADKQGCTLKDGTVTTPEGWRAAYE
AWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPAFGIGGVLTMGAIEALTAHGAPELQQTYLTKMVAGTWTGTMN
LTEPQAGSDLAALRAKAVKQADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSFG
ERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAVGIQGVAVAERATQRAFAYAKD
RRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAICLKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDIG
IEVASTGVQVHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAPD
FGHTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALAAYGERAAGGTDPRLAARIALA
RFFAENLATEAKGLEEAVTSGANGVLEAEAVLAVA

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=343, Percent_Identity=30.3206997084548, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI4557233, Length=307, Percent_Identity=28.0130293159609, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI21361497, Length=373, Percent_Identity=25.7372654155496, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4501859, Length=308, Percent_Identity=27.9220779220779, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI7656849, Length=374, Percent_Identity=27.0053475935829, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI226958414, Length=357, Percent_Identity=25.2100840336134, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI226958412, Length=357, Percent_Identity=25.2100840336134, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI4557231, Length=340, Percent_Identity=27.6470588235294, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI187960098, Length=340, Percent_Identity=27.6470588235294, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI87082384, Length=298, Percent_Identity=29.8657718120805, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI87081958, Length=365, Percent_Identity=26.5753424657534, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=351, Percent_Identity=29.0598290598291, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=481, Percent_Identity=25.7796257796258, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=351, Percent_Identity=29.0598290598291, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=435, Percent_Identity=27.3563218390805, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=411, Percent_Identity=26.2773722627737, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=308, Percent_Identity=28.2467532467532, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=428, Percent_Identity=25.9345794392523, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=26.4197530864197, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17534899, Length=431, Percent_Identity=25.5220417633411, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=353, Percent_Identity=26.628895184136, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=356, Percent_Identity=25.2808988764045, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=310, Percent_Identity=24.8387096774194, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21355753, Length=429, Percent_Identity=28.4382284382284, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363737, Length=420, Percent_Identity=26.1904761904762, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI21356377, Length=361, Percent_Identity=27.4238227146814, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24660351, Length=381, Percent_Identity=24.6719160104987, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666513, Length=316, Percent_Identity=27.5316455696203, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24646207, Length=378, Percent_Identity=26.4550264550265, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 62496; Mature: 62365

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRAPVEEVAFFLKTCTALPLLMEQGLVDLSFDVVDPVLEEAGKFAASVIAPLDKVADK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGCTLKDGTVTTPEGWRAAYEAWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPA
CCCEECCCEEECCHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCC
FGIGGVLTMGAIEALTAHGAPELQQTYLTKMVAGTWTGTMNLTEPQAGSDLAALRAKAVK
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHH
QADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSF
HCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHCCCCCCC
GERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAV
CCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCEEEE
GIQGVAVAERATQRAFAYAKDRRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAIC
EECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHH
LKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDIGIEVASTGVQVHGGMGYVEE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHH
TGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAP
CCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DFGHTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
AYGERAAGGTDPRLAARIALARFFAENLATEAKGLEEAVTSGANGVLEAEAVLAVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEC
>Mature Secondary Structure 
SYRAPVEEVAFFLKTCTALPLLMEQGLVDLSFDVVDPVLEEAGKFAASVIAPLDKVADK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGCTLKDGTVTTPEGWRAAYEAWTAAGWSSVAAEEEFGGQHLPTSVTSALTEFWNSASPA
CCCEECCCEEECCHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCC
FGIGGVLTMGAIEALTAHGAPELQQTYLTKMVAGTWTGTMNLTEPQAGSDLAALRAKAVK
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHH
QADGTYRVFGTKIFISYGEHDIAENIVHLVLARLPDAPAGTRGISLFLVPKVLVNADGSF
HCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHCCCCCCC
GERNDVVCAGIEHKLGLHGSPTCTMVFGEKGEGAIGYLVGEENRGLACMFTMMNNARLAV
CCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCEEEE
GIQGVAVAERATQRAFAYAKDRRQGKAPGFEGSAPIIAHPDVKRMLLTMRAETDAARAIC
EECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHH
LKTADALDRAHRLPDPSARAAALAEASLLTPVAKAFSTDIGIEVASTGVQVHGGMGYVEE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHH
TGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNAVIADYRDIAAEVAALNAP
CCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DFGHTGVRLAEAVDALARATRKMLDWLPSDQAKALAGATPYLRLFARAAGGAYLAKVALA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH
AYGERAAGGTDPRLAARIALARFFAENLATEAKGLEEAVTSGANGVLEAEAVLAVA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]